Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00486 | ATGGATAACAATCAGGGAGATTTGACTGATATAATTAGAGCCTCTGTCGGAGCTTATGGTGGTGGCGGCGGCGGCGCTGACTCATCCGAAGAGCCCATTTCAGATTGGAACTTCCCATCCGAACCCATGAATTTTTCTTCAACTTTCAATGATTCCAAAGTAGATTTTGGCCACCCATTTTCCTCAGTCCGAGATCCACTTCTTCATGAGCTTGATATCACTTCTTCTAGCTTTTTGATTAGCAGCTCAAATTCTGCAGAAATTGTTCACGACAAGACGAATTGGCCTCCTTCTAACATTTTTTCTCGCCTTCTTCAGATCTCTCCCACCTCCGAAATTCCCTCGTCTCCATCTGATCATTATCGTTCTCCTTCCCAGCTTGTTGATCATTCTGGGCAAACTAAAGCTTCTGCTTCTGTTTCAGGAGACATGATTAATGCCGACAACTTAGACAGCTTTTCGACTGATACAATCGGGATGCAGATCTCTTCACCACCGAATCCAATCGGAATTAAGCGAAGGAAAAGCCAGGCGAAAAAGGTGCTATGTATTCCAGCTCCAGCAGCTGCAAACAGCAGGCAAAGTGGAGAAGTAGTTCCTTCTGATCTCTGGGCATGGAGGAAGTATGGTCAGAAACCAATTAAAGGATCTCCATATCCAAGGGGATATTATAGATGTAGCAGCTCAAAGGGTTGCTCGGCCAGAAAACAAGTGGAGAGAAGCAGAAATGATCCAAATATGCTGGTCATCACTTACACCTCTGAGCACAATCATCCATGGCCGACCCAAAGAAATGCTCTTGCCGGCTCCTCGAGAACATCAACATCGAAAACCGGAGCCTCTTCTAAGAGTTCTTCAAGCTCTCACCTTCAAAATCCGAGCTCCAACGAAGAACAAAAGGAAATCAGCTACAGTGACGACGGCTGTGTTTCAACGACAAGTACATCTGTCAAGGAAGAGAGTGATGATTTTGAGAGAGGACTGGATTTTGATGAATCTGAGGGGTTTTTCGAAGATTTGGAGGAGTTAGAGAGAGACCCTTTAGATGTCTTGCTCAGCCAAGGTTTTAATGGAGACTCTCTTTGA | 1086 | 44.94 | MDNNQGDLTDIIRASVGAYGGGGGGADSSEEPISDWNFPSEPMNFSSTFNDSKVDFGHPFSSVRDPLLHELDITSSSFLISSSNSAEIVHDKTNWPPSNIFSRLLQISPTSEIPSSPSDHYRSPSQLVDHSGQTKASASVSGDMINADNLDSFSTDTIGMQISSPPNPIGIKRRKSQAKKVLCIPAPAAANSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSSRTSTSKTGASSKSSSSSHLQNPSSNEEQKEISYSDDGCVSTTSTSVKEESDDFERGLDFDESEGFFEDLEELERDPLDVLLSQGFNGDSL | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 45736800 | 45738961 | + | Bda005905.1 | Bda02g00486 | 2781 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00486 | 361 | MobiDBLite | consensus disorder prediction | 253 | 317 | - | - | |
Bda02g00486 | 361 | SUPERFAMILY | WRKY DNA-binding domain | 198 | 261 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00486 | 361 | Gene3D | WRKY domain | 174 | 254 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00486 | 361 | PANTHER | WRKY TRANSCRIPTION FACTOR 14-RELATED | 5 | 359 | - | - | |
Bda02g00486 | 361 | SMART | WRKY_cls | 200 | 260 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00486 | 361 | ProSiteProfiles | WRKY domain profile. | 195 | 261 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00486 | 361 | MobiDBLite | consensus disorder prediction | 253 | 335 | - | - | |
Bda02g00486 | 361 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 5 | 359 | IPR044810 | GO:0003700 | |
Bda02g00486 | 361 | MobiDBLite | consensus disorder prediction | 111 | 142 | - | - | |
Bda02g00486 | 361 | MobiDBLite | consensus disorder prediction | 19 | 41 | - | - | |
Bda02g00486 | 361 | Pfam | WRKY DNA -binding domain | 202 | 259 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00096 | Bda-Chr1:14103898 | Bda02g00486 | Bda-Chr2:45736800 | 4.29E-102 | dispersed | |
Bda02g00486 | Bda-Chr2:45736800 | Bda13g00357 | Bda-Chr13:4459365 | 6.45E-42 | dispersed | |
Bda02g00486 | Bda-Chr2:45736800 | Bda11g00236 | Bda-Chr11:2806716 | 2.07E-44 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15551 | PF03106 | WRKY | 1.20E-25 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00486 | - | - | jre:108988835 | 336.65 |