Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00486 ATGGATAACAATCAGGGAGATTTGACTGATATAATTAGAGCCTCTGTCGGAGCTTATGGTGGTGGCGGCGGCGGCGCTGACTCATCCGAAGAGCCCATTTCAGATTGGAACTTCCCATCCGAACCCATGAATTTTTCTTCAACTTTCAATGATTCCAAAGTAGATTTTGGCCACCCATTTTCCTCAGTCCGAGATCCACTTCTTCATGAGCTTGATATCACTTCTTCTAGCTTTTTGATTAGCAGCTCAAATTCTGCAGAAATTGTTCACGACAAGACGAATTGGCCTCCTTCTAACATTTTTTCTCGCCTTCTTCAGATCTCTCCCACCTCCGAAATTCCCTCGTCTCCATCTGATCATTATCGTTCTCCTTCCCAGCTTGTTGATCATTCTGGGCAAACTAAAGCTTCTGCTTCTGTTTCAGGAGACATGATTAATGCCGACAACTTAGACAGCTTTTCGACTGATACAATCGGGATGCAGATCTCTTCACCACCGAATCCAATCGGAATTAAGCGAAGGAAAAGCCAGGCGAAAAAGGTGCTATGTATTCCAGCTCCAGCAGCTGCAAACAGCAGGCAAAGTGGAGAAGTAGTTCCTTCTGATCTCTGGGCATGGAGGAAGTATGGTCAGAAACCAATTAAAGGATCTCCATATCCAAGGGGATATTATAGATGTAGCAGCTCAAAGGGTTGCTCGGCCAGAAAACAAGTGGAGAGAAGCAGAAATGATCCAAATATGCTGGTCATCACTTACACCTCTGAGCACAATCATCCATGGCCGACCCAAAGAAATGCTCTTGCCGGCTCCTCGAGAACATCAACATCGAAAACCGGAGCCTCTTCTAAGAGTTCTTCAAGCTCTCACCTTCAAAATCCGAGCTCCAACGAAGAACAAAAGGAAATCAGCTACAGTGACGACGGCTGTGTTTCAACGACAAGTACATCTGTCAAGGAAGAGAGTGATGATTTTGAGAGAGGACTGGATTTTGATGAATCTGAGGGGTTTTTCGAAGATTTGGAGGAGTTAGAGAGAGACCCTTTAGATGTCTTGCTCAGCCAAGGTTTTAATGGAGACTCTCTTTGA 1086 44.94 MDNNQGDLTDIIRASVGAYGGGGGGADSSEEPISDWNFPSEPMNFSSTFNDSKVDFGHPFSSVRDPLLHELDITSSSFLISSSNSAEIVHDKTNWPPSNIFSRLLQISPTSEIPSSPSDHYRSPSQLVDHSGQTKASASVSGDMINADNLDSFSTDTIGMQISSPPNPIGIKRRKSQAKKVLCIPAPAAANSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSSRTSTSKTGASSKSSSSSHLQNPSSNEEQKEISYSDDGCVSTTSTSVKEESDDFERGLDFDESEGFFEDLEELERDPLDVLLSQGFNGDSL 361
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 45736800 45738961 + Bda005905.1 Bda02g00486 2781
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00486 361 MobiDBLite consensus disorder prediction 253 317 - -
Bda02g00486 361 SUPERFAMILY WRKY DNA-binding domain 198 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda02g00486 361 Gene3D WRKY domain 174 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda02g00486 361 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 5 359 - -
Bda02g00486 361 SMART WRKY_cls 200 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00486 361 ProSiteProfiles WRKY domain profile. 195 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda02g00486 361 MobiDBLite consensus disorder prediction 253 335 - -
Bda02g00486 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 359 IPR044810 GO:0003700
Bda02g00486 361 MobiDBLite consensus disorder prediction 111 142 - -
Bda02g00486 361 MobiDBLite consensus disorder prediction 19 41 - -
Bda02g00486 361 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00096 Bda-Chr1:14103898 Bda02g00486 Bda-Chr2:45736800 4.29E-102 dispersed
Bda02g00486 Bda-Chr2:45736800 Bda13g00357 Bda-Chr13:4459365 6.45E-42 dispersed
Bda02g00486 Bda-Chr2:45736800 Bda11g00236 Bda-Chr11:2806716 2.07E-44 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15551 PF03106 WRKY 1.20E-25 CL0274 Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00486 - - jre:108988835 336.65