Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00487 ATGGATTCTGCTAGAAGTTGGTTTCAGAAATTTCAACATAGAGACAATAGGGAAACTGAGAATGTGAAAGATGTTGATGAAGCCCCTTCCAGTGCAACAAAGCAGAAAGTTGAGGCTGCAAAGCAATACATTGAGAATCATTATAAATCTCAAATGAAGTCACTGCAAGATAGGAAAGAGAGGCGTTGGGTCATGGAAAGGAGGCTTGCTGATGCTGATGCTTCAGAGGAAGATCAAATGAACGTGTTGAAATATTTAGAGAGACAAGAGACAGAATATATGCGTTTACGAAGGCATAAAATGGGCGTTGATGATTTTGAGCTTTTGACTATTATAGGAAGGGGTGCATTTGGGGAGGCTCTTAAGAATTTTTTAGCTTTCTACACTACAGTTGGTCTAATGTCGCAATGTTATCAAAGTTGTCATGGAAAAAGACAAAATCATTCATTTGGATGTATATATGTTGAACACGTGAAGGCTGAGAGAAATCTTTTAGCTGAGGTTGATAGTGCGTATATTGTCAAGCTTTACTGCTCTTTTCAAGATGATGAGTTTTTGTATCTTATTATGGAGTATCTTCCTGGAGGTGATGTGATGACATTACTGATGCGCAAGGACACTTTGACTGATGATGAGGCAAGGTTTTACGTTGGAGAGACAGTACTTGCCATTGAATCTATCCACATGCACAATTACATCCACAGGTTCTTTTTTTTTTTTTTTTTATGTGAAAAGTATTTTTTTCTGCTTTATAGGGACATAAAGCCTGACAATTTACTGCTTGATCGTTATGGTCATCTTAAACTTTCAGACTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCGAATCTTAGTGAGAATGACTACCAAATAGAAAGGAATCAGAAACCTATAGAAAGAAATGAGTTCCCTTCTAGCTTCCAGTCTGTACAAAGACGGACCCAGCAGGAACAGTTGTTGCATTGGCAAAAGAATAGACGAACATTGGCCTATTCAGCGGTTGGAACTCCTGATTACATTGCGCCTGAGGTATTGTTGAGGAAAGGATATGGAATGGAGTGCGACTGGTGGTCTCTGGGAGCAATCATGTATGAGATGCTTGTGGGATATCCTCCTTTTTATTCTGAAGATCCAATGTCAACATGCCGAAAGATAGTTAACTGGAGGGTGCATTTGAAATTCCCTGAAGAGGCCAAGCTGTCTGCTGAGGCGAAAGATCTAATTTGCAAACTTCTTTGCAACGTTGACCAAAGGCTTGGAACAAAAGGAGCTTTTGAAATCAAAGCACACCCTTGGTTTAGAGGACTAAAATGGGATAAACTGTATCAAATGGAAGCTGCTTTCATACCAGAGGTCAAAGATGAGTTAGATACTCAAAACTTTGAGAAGTTTGAAGAGGTCTCCCCCGCTCAAACTCCCACAAAATCAGGTCCTTGGAGAAAGGCAAGTCCCAAAATTGTTCTTATTTTGCATTTAAGATCTTTTGTTTTATTACAGATGCTTTCACCGAAGGATGTGAATTTTGTCGGTTATACATACAAAAACTTCGAGATTGTTAATGAGCATCATTTGTCGGGCATTGCTGAGATGAAGAAAAAGTCTTCTAAGCCAAAGAGACCATCTATCAAGTCGTTATTTGATACACCTGATCCTTCAGATCAGTCTGTTCAGCAAAACTCTCTCAAATATTTACCAACCCACTTAGAAGGATCAGAAAGCCCCGAACCCTCACCGCATTCACTTAGACCAACACAACACACGTCTTGGCGAAGATAA 1782 39.62 MDSARSWFQKFQHRDNRETENVKDVDEAPSSATKQKVEAAKQYIENHYKSQMKSLQDRKERRWVMERRLADADASEEDQMNVLKYLERQETEYMRLRRHKMGVDDFELLTIIGRGAFGEALKNFLAFYTTVGLMSQCYQSCHGKRQNHSFGCIYVEHVKAERNLLAEVDSAYIVKLYCSFQDDEFLYLIMEYLPGGDVMTLLMRKDTLTDDEARFYVGETVLAIESIHMHNYIHRFFFFFFLCEKYFFLLYRDIKPDNLLLDRYGHLKLSDFGLCKPLESSSFPNLSENDYQIERNQKPIERNEFPSSFQSVQRRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRVHLKFPEEAKLSAEAKDLICKLLCNVDQRLGTKGAFEIKAHPWFRGLKWDKLYQMEAAFIPEVKDELDTQNFEKFEEVSPAQTPTKSGPWRKASPKIVLILHLRSFVLLQMLSPKDVNFVGYTYKNFEIVNEHHLSGIAEMKKKSSKPKRPSIKSLFDTPDPSDQSVQQNSLKYLPTHLEGSESPEPSPHSLRPTQHTSWRR 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45741741 45758662 - Bda005906.1 Bda02g00487 2782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00487 593 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 557 - -
Bda02g00487 593 Gene3D Transferase(Phosphotransferase) domain 1 250 281 - -
Bda02g00487 593 Gene3D Transferase(Phosphotransferase) domain 1 197 235 - -
Bda02g00487 593 Gene3D Transferase(Phosphotransferase) domain 1 330 453 - -
Bda02g00487 593 MobiDBLite consensus disorder prediction 531 593 - -
Bda02g00487 593 MobiDBLite consensus disorder prediction 7 31 - -
Bda02g00487 593 SMART pkinase_C_6 436 517 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda02g00487 593 MobiDBLite consensus disorder prediction 579 593 - -
Bda02g00487 593 Gene3D Phosphorylase Kinase; domain 1 454 464 - -
Bda02g00487 593 SUPERFAMILY Protein kinase-like (PK-like) 86 482 IPR011009 -
Bda02g00487 593 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 557 - -
Bda02g00487 593 SMART serkin_6 106 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00487 593 ProSiteProfiles AGC-kinase C-terminal domain profile. 436 525 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda02g00487 593 Gene3D Phosphorylase Kinase; domain 1 77 196 - -
Bda02g00487 593 MobiDBLite consensus disorder prediction 549 568 - -
Bda02g00487 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Bda02g00487 593 ProSiteProfiles Protein kinase domain profile. 106 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00487 593 Pfam Protein kinase domain 107 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00487 593 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00487 Bda-Chr2:45741741 Bda08g00275 Bda-Chr8:2863373 0 dispersed
Bda02g00487 Bda-Chr2:45741741 Bda10g00636 Bda-Chr10:40402956 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69501 PF00069 Pkinase 5.90E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00487 K08790 - vvi:100244001 811.216