Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00507 ATGGGTGGTCTGATCGATTTGAACACGACGGAGGACGACGAGACTCCGTCTTTTGCCGGTTCCCCTGATTCGTCTTCATCTGCTTCTGGTTCTACTTCACCGGTTCCATTTTGCTGGGAGCTATGGCACGCCTGCGTTGGTCCTCTGATTTCTTTGCCGAAGAAAGGTAGTGTAGTCGTTTATTTACCGCAAGCTCACTTGGAGATAGCCAGAGATTTTCCCGCCGGAGCCTATGATCTTCCTCCTCATCTCTTCTGTCGTATTCTTGACGTTCAGCTCCAAGCAGAGGCAGGAACTGATGAGGTTTCCGCTCGGATTTCTCTGGTTCCAGAAAGTCAGAATTTTGAGCAGAAGCTGCAAGAAGGGGAAATCAATGCAGATAATGTCGGAGACGATTTCGAAGCAGTCGTGAAGTCAACTACACCTCATATGTTCTGCAAGACTCTAACTGCTTCGGATACTAGCACTCATGGTGGCTTCTCCGTCCCCCGTCGAGCTGCTGAAGATTGCTTTCCTCCGTTGGATTATAATCAGCAGAGGCCTTCACAAGAGCTTTCGGCAAAGGATCTTCACGGGTTGGAATGGAGGTTTCGACATATCTACCGAGGCCAGCCTAGAAGACATCTGCTCACAACCGGATGGAGTGCATTTGTAAATAAGAAAAAGCTTACCTCAGGGGATGCAGTACTATTCCTTAGGGGCGAGGATGGTGATTTGAGACTCGGAATAAGAAGGGCGGCACAGGTCAAAGACGGGTCTGCCACTCCTGGTTTGTGCAGCCAGCAGCCTAGCCTCTGCAATCTTAGGAATGTGATTGATTGTGTATCGACGAGAAGTGCATTCAGTGTTCATTGCAATCCGAGGACCTCGGCCGAGTTCATTATACCTTTTCCCAAATTCTTGAAGAGTGTAAACCAATCTTGTCCAATCGGAATGAGGTTTAAGATGCGTTTTGAAACGGAGGACGCGGCTGAACGAAGACACACGGGCCAGATAGCTGCAATTAGCGATGTGGATCCAATTAGGTGGCCAGGTTCTAAGTGGAGATGTTTAGTGGTGAAGTGGGACGAAGCCGAAAAGAGTAGGCATGGTCGGGTTTCTCCGTGGGAGATCGAGCTGTCTGGTTCTCCTCCTGGATCGAACGGCTTGGGTTTTCCGGGTTTGAAGAGGACAAGGATTAAGTTGTCTTCTGATAAACCAGACTTCCCAATCCCTAGCGCGATTGGGCAATCGAACTTTGCGGAATCTCTAAGATTCCCGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTTTTGATGCTTCATTCGATGGTTATGGAAATAAAAATCGACTACCATCCGCAAGAAGGGTGTTTTCATGCATGAATTCTGATGTTCCTTCTCAAAGCGTAGGCGCTAGAGGTAAGTCTTGCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCGAGCCTTCCGTACGGACGAACGACATGGACTCTTAACATGGCTCGAGAAAATGGCGAAGGCCGTGTAATCTTCGATGGGTTTCAAGTTCCCAAAGCTAAAAACGGTTGGCCTCTCTCGATGCATAGTTCAATTACGTACGACAAAATATCCTCTGCGACTGCCCAGGCGTCCTCCCCATCTTCTGTGTTAACATTTCAGCAGGCTATCAATGTAACTCCAGCCTCCAGTTCAGTCTACAGCAGTGGAAAAAGATGTCACTTTGCTGATGGATTAAGAAAAGAAATGCAGTCAAATGAGGATAATCAATTGGGTGGATCAAGTTTGAGCGGAAATCCGGTTCCTATGTGCAAAACTAATTGCAGACTATTCGGTTTTTCGCTGATCCAAGAAAATCAAGTCCCCCAGCTGGAGAAAGCTTTTCCGGTTTCATCTGCAGCTCCTTACCTGTCTAACATGGGGGGACTGTGTCATCCAAAACCTCCATTGATGAACAAAGGGGTTGGAAACAAAGGAGGTCTGCCGTTCTGTTTTGCTAACTGTGGAACTTAA 1998 47.5 MGGLIDLNTTEDDETPSFAGSPDSSSSASGSTSPVPFCWELWHACVGPLISLPKKGSVVVYLPQAHLEIARDFPAGAYDLPPHLFCRILDVQLQAEAGTDEVSARISLVPESQNFEQKLQEGEINADNVGDDFEAVVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELSAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLTSGDAVLFLRGEDGDLRLGIRRAAQVKDGSATPGLCSQQPSLCNLRNVIDCVSTRSAFSVHCNPRTSAEFIIPFPKFLKSVNQSCPIGMRFKMRFETEDAAERRHTGQIAAISDVDPIRWPGSKWRCLVVKWDEAEKSRHGRVSPWEIELSGSPPGSNGLGFPGLKRTRIKLSSDKPDFPIPSAIGQSNFAESLRFPKVLQGQEILGFDASFDGYGNKNRLPSARRVFSCMNSDVPSQSVGARGKSCRFQKVLQGQEIFPSLPYGRTTWTLNMARENGEGRVIFDGFQVPKAKNGWPLSMHSSITYDKISSATAQASSPSSVLTFQQAINVTPASSSVYSSGKRCHFADGLRKEMQSNEDNQLGGSSLSGNPVPMCKTNCRLFGFSLIQENQVPQLEKAFPVSSAAPYLSNMGGLCHPKPPLMNKGVGNKGGLPFCFANCGT 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45982922 45986106 + Bda005927.1 Bda02g00507 2802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00507 665 ProSiteProfiles B3 DNA-binding domain profile. 145 247 IPR003340 GO:0003677
Bda02g00507 665 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 29 650 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bda02g00507 665 CDD B3_DNA 143 245 IPR003340 GO:0003677
Bda02g00507 665 PANTHER AUXIN RESPONSE FACTOR 3 29 650 - -
Bda02g00507 665 Pfam Auxin response factor 273 351 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bda02g00507 665 Gene3D - 143 247 IPR015300 -
Bda02g00507 665 Pfam B3 DNA binding domain 145 246 IPR003340 GO:0003677
Bda02g00507 665 MobiDBLite consensus disorder prediction 10 29 - -
Bda02g00507 665 SUPERFAMILY DNA-binding pseudobarrel domain 137 250 IPR015300 -
Bda02g00507 665 Gene3D - 308 378 - -
Bda02g00507 665 MobiDBLite consensus disorder prediction 1 29 - -
Bda02g00507 665 SMART B3_2 145 247 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00507 Bda-Chr2:45982922 Bda09g01238 Bda-Chr9:43825008 0 dispersed
Bda02g00507 Bda-Chr2:45982922 Bda02g00770 Bda-Chr2:48437939 2.91E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15554 PF02362 B3 1.00E-21 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00507 K14486 - zju:107412017 739.954