Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00512 ATGGAGGGTGAGGCTTCGGATGAAGAAAATCGGAATCTTGACGATCGCGATAATAATAAGACTAGCAACTCGAATGAAGGTATGGGCAAGCCTAAGCGGCAGATGAAGACTCCGTTTCAGCTTGAAACTCTTGAGAAGGCCTATGCCCTGGAAACTTATCCAGGCGAGTGCAGTCGCATAGAACTGTCAAAGAAATTAGGGTTGACGGATAGGCAATTGCAGATGTGGTTTTGTCATAGAAGGTTGAAGGACAAGAAGGAAGCACCTGCTAAAAAAAATGTGAAGATGGTGCCAGCATCTCTGCCGGATTCTCCTAGTGATGATTTGAGAATGGGGGCTGGTCCAGGTAGTGATTATGGGTCTGGGTCAGGTTCTAGTCCGTTTGGTCACGCAGACGTACGCAATGCAATGCCTTGGAGTGGTGGAGATGATATTCGAACGATGAGAAAGTTTCATGAGCCTTCTCAGTCTTTAATGGAGCTGAGAGCTATTGCCTGTGTAGAAGCACAGTTAGGGGAGCCATTGAAGGAAGATGGGCCAATTCTTGGAATAGAATTTGATTCTTTACCTCCTGATGCATTTGGAGCATCTATAGAAGTAGCGACGGAGCAACTGAAAAGGTCTGGGAATCTTTATGATGGAATAACATATGAACGAAGAGATTCAAAGTCAAATAAAGCTACTCGAAGAACTTTTCATGACTTTTCCTATCTTCAAGATGTGTCCAGTATAAGAACTGATATATATGGACAAATTACACAATCGCATTATGCTGATTCTGTAGTTGAAGTGCCATCTGCCAGGACATCATCGTTCTTGCATGGTAATGAACAGTCAACAAGGAGCCATGGTTTTCATGGTTATCTTCCACGTGCTCGTCTATTGTCTCAAAAAGACAAGGAAGGAATTGCAATTCCATCACCTTCTGGAGATGATGACTTTATTCCTCCAAGGAATTCTTACACAAACAACAGAATAAATGATCAGTTAACTGATCATCCAGCAATTGGACCAGAAAATCCATATTTATCATCAGATGGACGCAGTTTTCAAAATGATGATATTCTATGGATGGAAAGGAAACATAAGAGTGGAGCACAAATCTCTAAAGAAGGTGAAGCTCATGAGATACGAATCCGGAAAGAACTGGAGAAACAAGACGCTCTGAGGAAAAAGGGTGAAGAACGATCAAGGAAAGTAATGGAAAAGCAAGACCGAGAAAGGAAAAAGGAGGAAGAAAAGTTACTGCGTGAAAGGCAACGAGAGGTGGAGAGATTAAAGCGTGAGAAAATAAGGGAGAATGAACGCAGGGAAAGGTTTCTGGAGAAAGAAAATATGAGAGCCGAGAAAAGGAAGCAAAGGGAAGAACTTCGCAAGGAGAGAGAGGCAGTAAGGCGCCAAGCTGCAGCTGAAAAGGCCAATGCACGGAGAATCGCTAGAGAATCTATGGAGCTAATTGAGGATGAACAACTGGAGCTGATGGAACTGGCTGTTGCAAGGAAAGGATTATTGTCAATAGCAAATCTTGATTTTGACACCTTGCAAAATCTCGATTCATTCAGAGATTTTATAGGTTCCTTTCCACCAAAGACTGTGCATCTGAAAAGACCGTTTGGAGTGAAACCCTGGACCATATCAGAGGAGAATATTGGAAACCTTCTCATGGTTTGGAGATTTTTAATTACATTTGCGGACGTTCTAGAATTGTGGCCTTTTACTCTTGATGAGTTTGTTCAAGCCATTCATGACTATGATTCCAGATTGTTGGGAGAAATTCATATTTCTCTCCTGAGGTTGATTATTAAAGACATTGAAGATGTTGCAAGGATGCCTTCAACTGGATTGGGGATGAATCAAAATGGTGTTGTCAATCCTGGAGGTGGACATCCACAGATTGTTGAAGGGGCCTATGCGTGGGGCTTTGACATTTGCAAATGGCAGAGACATTTAAATTCTTTAACATGGGCAGAAATATTTCGACAGTTGGCACTTTCTGCCGGATTTGGACCACAGTTAAAGAAAAGAAGTATAAAATGGTCAGACGTGCGTGATAACAATGAGAGTAAAGGCTGTGAAGATGTGGTTTCTACTCTACGCAATGGTTCAGCAGCAGAAAACGCTTTTGCGTTGATGCAAGAGAGAGGATTGTTAGCTCCGCGGAAATCCAGACATCGTTTGACTCCTGGAACTGTCAAATTTGCCGCTTTTCATGTTCTATCATTGGAGGGAAGCAAAGGACTTACAGTAGTAGACCTTGCTGACAAGATTCAGAAATCTGCACTTAGAGATCTATCAACAAGCAAAACACCAGAGGCTTCTATATCAGTTGCCTTGACAAGGGATACTAAGCTTTTTGAGAGAATAGCTCCATCAACTTATCGAGTGAGAGCTCCCTACAGAAAGGATCCTATTGATTCTGAGGAGATACTGTCATCTGCTAGGAAGAAAATTCAGATATTTCAAAATGGGTTTTTACCTTGTGAAGATGTTGAACGTGATGAAGAATCTGAATGCGACGATATTGATGAGGACCCTGAAGTTGACGATTTAGGTACTCCTACCTTAGAAAATAAAAATGCTGATAAGAGAAATCAAGAAGAATCTTGCGTATCAAATGGGAAAGAAACTTTATGCCCAGATGTATTATCAACTCCACAAAATGAGTTTGACAAGGATATGACCACCTTCCCATTTAGTGTTTCTAACTATGCCAAATATTCGGTTTCTGATGCAAAGCAATATAGTTGTGTTCCTGAAATTACTAATCTTGATCAAGAAAATATGGAGTTTGATGAAAGCAAGGCTGGTGAATTATGGATTCAAGGGCTAACAGAAGGAGAATATTTTGGTCTCAGTGTAGTGGAGCGGCTAAACGCACTTGTTGCATTAATTGGCATTGCAAATGAAGGAAACTCTATCCGTGTTGTTCTTGAGGATCGTCTGGAGGCTGCAAATGCACTTAAAAAGCAAATGTGGGCAGAGGCACAAGTTGATAAAAGTCGCCCGAAAGACGATCTTGTACCTAAATCTGATTTTCCATCTATCATGGGAATCAAAGCGGAAGGACAACATTGTTCAACGCTAGATGGTGGCCAAAGCCCATTTCCTGATGTTGACAATAGGAATGATCAAGTATCTCCTAGTAATGCTGAGAACCAAAAATCACTAAATGGTTTTCGAACAGATCAAGATCTTCTTAACTGTTCACGTGAAGAAAAGGGCTCTGTGCCACAAGATTTTTCAGTCAGTCAAGATAATTTGTTTCAGCAGATTGGCAATGCAACAAAAAAGTCACGGTCACAGTTAAAATCTTATATTGGCTTCAGAGCAGAAGAGATGTACACATATAGATCATTACCCCTTGGCCGTGATCGCAAGCGCAATCGATATTGGCAATTTGTTGCATCTGCTTCGAGTAATGACCCTGGTTCTGGTAGGATCTTTGTTGAATTACATGATGGTCATTGGAGGCTTATTGACTCAGAAGAGGCTTTTGATTCTCTTTTGATCTCCTTGGACACACGTGGGATTAGAGAATCAAATTTGCGCTTAATGTTGCAAAACATTGAGACATTCTTTAAGGAAAATGTCAGAAGGTCCGTTCAGCTAAATAATCTTGTGGTTGCTAGTGGAACTTGTGTGAAAAGTTGTGCTGATGAAATGGAATGTAGTCCTACCCCTCCTGCTGCTTTGGACAGTCCAAGCAGTGCTGTTTGTGGCTTGAATTTAGATATGATGGTAACCTCATCTTCATTCAAAATTGACCTTGGGAGAAATGAAACTGAGAAGCAAGCTGCTTTGAAAAGGTATCAAGAATTTCAGAGGTGGGCATGGAGTGAATGCATAAATACATTATCTGCTATGAAGTACGGAAAGACGAGATGCAAGCAGCTGTTAGACAATTGCGAGCCCTGTCTTAGCTCATATAACTCCGAACATTCCCATTGCCTTTCTTGCCATCAAACTTTTGACAGCAATGACTTGAATTTCTCTGATCACCTAATTTATTGTGAAGAAAGTAGAAAGCTTAAGCATGGGGAAATGCGTGCTTTAGATTCTACTCTCCCTCTTGGAAGCAGACTGGTGAAGACCGTGTTGGCTCTTATTGAGTCATCTATACCATCAGAAGCTTTAGAATCATGTTGGACTGAAGAGCATCGAAGGACTTGGGGCCTGAAGTTAAATATGTCATCATCCATTGAAGAGCTTCTTCAGATGTTGACTCAATTGGAGAGAGTGATAAAGCGAAACTCTCTGTCTTCAAGTTTTTCAACTACACAGGAGCTTTTGGGCTCCATGGCTCCATTGAATTTATCTTGTGATACAAAAGATTCTGGCTCAGACTCCATTCTGCCATGGATACCACGAACAGTTTCTGCAGTTTCTTTGAGACTTTTTGAATTAGATGCTTCCATTATGTACTGTCAATCTCAGAAATCTGAGCCTGGTTTCGACGACGGAGACAGCAAATTCACGAAGCCACACGCGCCAATGAAGGAAAGCATGAAGAACGAATCATGCGATCTAGACTGTGGGGATTTGATGAGAGATGATCATTCTGTTGGTTTAAGTAATGCTCAGAACAGATCCAAACGTGGTCGTGGGGATTCCGAGCAAGGACGAGGTAAGAAGTGGCAGAGACAAACTAATAACTCCAAAACGCATTACACTCGACAGGTCAATAAGGCAAGTGTGAAGTCTAACCAAGGACTAAGACGGGTGGGGCAAGGTTCACACGCGCAGGGTGGACGTGGCCGCCGAACCATTCGTAAGAGGAGAGCTGAAAATACCGATAAAGCATTGCTCGGACAAATTAATAAACACGTCCTCCAAAGTATAGGCGATGCTTCGAAAGATTTTAGCTTAGATTGGGATGGTGATGAAAAGATCAATACAGATATTAGAAAAGAAGAGGATGACATTGACAATATCGATGCGATCGACTCAGATGACGATGCTCGGGTTGCAGGATATGGTGGAGGGAATTGGGACGTCCGATCGGAAGGTCCTTCGAGCACGTGGAAGGAAGATGCGATGGAAGGAAGTGACGAAGATGTGGATGCATTTGAAGACGATAACGTCGTAGAAGAGGCGGGAAACGAGGATTCAGAAGGGGAGGCCGATTTGAGTGAGGATGGTTCAGATGGAATGGAAAATGGAGTGGGAAATGGTGAAGGTGGAGACTCATCTGTTTCTGAGGATTACAGTGATTGA 5214 42.06 MEGEASDEENRNLDDRDNNKTSNSNEGMGKPKRQMKTPFQLETLEKAYALETYPGECSRIELSKKLGLTDRQLQMWFCHRRLKDKKEAPAKKNVKMVPASLPDSPSDDLRMGAGPGSDYGSGSGSSPFGHADVRNAMPWSGGDDIRTMRKFHEPSQSLMELRAIACVEAQLGEPLKEDGPILGIEFDSLPPDAFGASIEVATEQLKRSGNLYDGITYERRDSKSNKATRRTFHDFSYLQDVSSIRTDIYGQITQSHYADSVVEVPSARTSSFLHGNEQSTRSHGFHGYLPRARLLSQKDKEGIAIPSPSGDDDFIPPRNSYTNNRINDQLTDHPAIGPENPYLSSDGRSFQNDDILWMERKHKSGAQISKEGEAHEIRIRKELEKQDALRKKGEERSRKVMEKQDRERKKEEEKLLRERQREVERLKREKIRENERRERFLEKENMRAEKRKQREELRKEREAVRRQAAAEKANARRIARESMELIEDEQLELMELAVARKGLLSIANLDFDTLQNLDSFRDFIGSFPPKTVHLKRPFGVKPWTISEENIGNLLMVWRFLITFADVLELWPFTLDEFVQAIHDYDSRLLGEIHISLLRLIIKDIEDVARMPSTGLGMNQNGVVNPGGGHPQIVEGAYAWGFDICKWQRHLNSLTWAEIFRQLALSAGFGPQLKKRSIKWSDVRDNNESKGCEDVVSTLRNGSAAENAFALMQERGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVVDLADKIQKSALRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPIDSEEILSSARKKIQIFQNGFLPCEDVERDEESECDDIDEDPEVDDLGTPTLENKNADKRNQEESCVSNGKETLCPDVLSTPQNEFDKDMTTFPFSVSNYAKYSVSDAKQYSCVPEITNLDQENMEFDESKAGELWIQGLTEGEYFGLSVVERLNALVALIGIANEGNSIRVVLEDRLEAANALKKQMWAEAQVDKSRPKDDLVPKSDFPSIMGIKAEGQHCSTLDGGQSPFPDVDNRNDQVSPSNAENQKSLNGFRTDQDLLNCSREEKGSVPQDFSVSQDNLFQQIGNATKKSRSQLKSYIGFRAEEMYTYRSLPLGRDRKRNRYWQFVASASSNDPGSGRIFVELHDGHWRLIDSEEAFDSLLISLDTRGIRESNLRLMLQNIETFFKENVRRSVQLNNLVVASGTCVKSCADEMECSPTPPAALDSPSSAVCGLNLDMMVTSSSFKIDLGRNETEKQAALKRYQEFQRWAWSECINTLSAMKYGKTRCKQLLDNCEPCLSSYNSEHSHCLSCHQTFDSNDLNFSDHLIYCEESRKLKHGEMRALDSTLPLGSRLVKTVLALIESSIPSEALESCWTEEHRRTWGLKLNMSSSIEELLQMLTQLERVIKRNSLSSSFSTTQELLGSMAPLNLSCDTKDSGSDSILPWIPRTVSAVSLRLFELDASIMYCQSQKSEPGFDDGDSKFTKPHAPMKESMKNESCDLDCGDLMRDDHSVGLSNAQNRSKRGRGDSEQGRGKKWQRQTNNSKTHYTRQVNKASVKSNQGLRRVGQGSHAQGGRGRRTIRKRRAENTDKALLGQINKHVLQSIGDASKDFSLDWDGDEKINTDIRKEEDDIDNIDAIDSDDDARVAGYGGGNWDVRSEGPSSTWKEDAMEGSDEDVDAFEDDNVVEEAGNEDSEGEADLSEDGSDGMENGVGNGEGGDSSVSEDYSD 1737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 46028137 46038359 + Bda005931.1 Bda02g00512 2807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00512 1737 Pfam HB1, ASXL, restriction endonuclease HTH domain 729 797 IPR007759 GO:0006355
Bda02g00512 1737 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 934 978 IPR028942 -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1479 1505 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1 38 - -
Bda02g00512 1737 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Bda02g00512 1737 SMART testlast3 547 606 IPR018501 -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 387 414 - -
Bda02g00512 1737 ProSiteProfiles HARE-type HTH domain profile. 729 798 IPR007759 GO:0006355
Bda02g00512 1737 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1483 1505 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1680 1713 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1518 1597 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1544 1575 - -
Bda02g00512 1737 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT1 5 1737 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 831 871 - -
Bda02g00512 1737 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 1737 IPR044977 GO:0006357
Bda02g00512 1737 Pfam DDT domain 548 603 IPR018501 -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1026 1061 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 855 869 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 831 850 - -
Bda02g00512 1737 CDD homeodomain 32 87 IPR001356 GO:0003677
Bda02g00512 1737 Pfam Homeodomain 30 86 IPR001356 GO:0003677
Bda02g00512 1737 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1117 1189 IPR028941 -
Bda02g00512 1737 Coils Coil 394 474 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1642 1737 - -
Bda02g00512 1737 MobiDBLite consensus disorder prediction 97 135 - -
Bda02g00512 1737 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Bda02g00512 1737 MobiDBLite consensus disorder prediction 1037 1061 - -
Bda02g00512 1737 Gene3D - 14 89 - -
Bda02g00512 1737 SMART HOX_1 29 91 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00512 Bda-Chr2:46028137 Bda06g00392 Bda-Chr6:6122310 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15556 PF15613 WSD 5.00E-14 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00512 - - jre:108984176 1931.76