Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00522 ATGGCTGCGAAAAAAGATGGAAAGAGGAGGTACGAAAAAATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAGCAGAAGAAGAAGATACAGGTGAACTAGGGTTTGGAGAGGATGACGGGAAGAAGAAAGTCACGTTGACTACTTCGATCTCTTCAAAGAAAGGCTCATCAAGTGCAGGGGGGGCCTCGACGGCTTCGTGTTGTCAGGCAGATAATTGCAATGCCCATCTGAAAGATACCAAACCCTACTATAAACGACATAAGGTCTGTGAGTTCCATGCTAAGGTGGTCGCCGGTTCCCGGCAAAGGTTTTGCCAGCAATGTAGCAGGTTCCATGAACTATCAGAGTTCGACGACTCGAAGAGAAGTTGCAGAAGTCGTTTGGCCGGACACAACGAGCGGCGACGGAAAATATTACCGGAGTTTCATGGAGATGGCTCCACCAGGTACCAGATGTAA 462 48.48 MAAKKDGKRRYEKMEEEEEEEEEEEAEEEDTGELGFGEDDGKKKVTLTTSISSKKGSSSAGGASTASCCQADNCNAHLKDTKPYYKRHKVCEFHAKVVAGSRQRFCQQCSRFHELSEFDDSKRSCRSRLAGHNERRRKILPEFHGDGSTRYQM 153
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 46080039 46081421 - Bda005940.1 Bda02g00522 2817
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00522 153 MobiDBLite consensus disorder prediction 46 67 - -
Bda02g00522 153 MobiDBLite consensus disorder prediction 1 67 - -
Bda02g00522 153 Gene3D - 59 126 IPR036893 GO:0003677|GO:0005634
Bda02g00522 153 ProSiteProfiles Zinc finger SBP-type profile. 66 139 IPR004333 GO:0003677
Bda02g00522 153 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 15 142 IPR044817 GO:0003677
Bda02g00522 153 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 15 142 - -
Bda02g00522 153 MobiDBLite consensus disorder prediction 1 15 - -
Bda02g00522 153 SUPERFAMILY SBT domain 68 143 IPR036893 GO:0003677|GO:0005634
Bda02g00522 153 MobiDBLite consensus disorder prediction 16 35 - -
Bda02g00522 153 Pfam SBP domain 69 138 IPR004333 GO:0003677
Bda02g00522 153 Coils Coil 4 34 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda02g00522 Bda07g00989 CCT
Bda02g00522 Bda07g00989 ECH
Bda02g00522 Bda09g01248 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00522 Bda-Chr2:46080039 Bda09g00515 Bda-Chr9:6825956 5.43E-35 dispersed
Bda02g00522 Bda-Chr2:46080039 Bda09g01248 Bda-Chr9:43919626 1.48E-69 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15559 PF03110 SBP 2.20E-26 No_clan Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00522 - - zju:107425063 163.696