Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00522 | ATGGCTGCGAAAAAAGATGGAAAGAGGAGGTACGAAAAAATGGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAGCAGAAGAAGAAGATACAGGTGAACTAGGGTTTGGAGAGGATGACGGGAAGAAGAAAGTCACGTTGACTACTTCGATCTCTTCAAAGAAAGGCTCATCAAGTGCAGGGGGGGCCTCGACGGCTTCGTGTTGTCAGGCAGATAATTGCAATGCCCATCTGAAAGATACCAAACCCTACTATAAACGACATAAGGTCTGTGAGTTCCATGCTAAGGTGGTCGCCGGTTCCCGGCAAAGGTTTTGCCAGCAATGTAGCAGGTTCCATGAACTATCAGAGTTCGACGACTCGAAGAGAAGTTGCAGAAGTCGTTTGGCCGGACACAACGAGCGGCGACGGAAAATATTACCGGAGTTTCATGGAGATGGCTCCACCAGGTACCAGATGTAA | 462 | 48.48 | MAAKKDGKRRYEKMEEEEEEEEEEEAEEEDTGELGFGEDDGKKKVTLTTSISSKKGSSSAGGASTASCCQADNCNAHLKDTKPYYKRHKVCEFHAKVVAGSRQRFCQQCSRFHELSEFDDSKRSCRSRLAGHNERRRKILPEFHGDGSTRYQM | 153 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 46080039 | 46081421 | - | Bda005940.1 | Bda02g00522 | 2817 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00522 | 153 | MobiDBLite | consensus disorder prediction | 46 | 67 | - | - | |
Bda02g00522 | 153 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Bda02g00522 | 153 | Gene3D | - | 59 | 126 | IPR036893 | GO:0003677|GO:0005634 | |
Bda02g00522 | 153 | ProSiteProfiles | Zinc finger SBP-type profile. | 66 | 139 | IPR004333 | GO:0003677 | |
Bda02g00522 | 153 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 15 | 142 | IPR044817 | GO:0003677 | |
Bda02g00522 | 153 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 | 15 | 142 | - | - | |
Bda02g00522 | 153 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Bda02g00522 | 153 | SUPERFAMILY | SBT domain | 68 | 143 | IPR036893 | GO:0003677|GO:0005634 | |
Bda02g00522 | 153 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
Bda02g00522 | 153 | Pfam | SBP domain | 69 | 138 | IPR004333 | GO:0003677 | |
Bda02g00522 | 153 | Coils | Coil | 4 | 34 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda02g00522 | Bda07g00989 | CCT | |
Bda02g00522 | Bda07g00989 | ECH | |
Bda02g00522 | Bda09g01248 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00522 | Bda-Chr2:46080039 | Bda09g00515 | Bda-Chr9:6825956 | 5.43E-35 | dispersed | |
Bda02g00522 | Bda-Chr2:46080039 | Bda09g01248 | Bda-Chr9:43919626 | 1.48E-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15559 | PF03110 | SBP | 2.20E-26 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00522 | - | - | zju:107425063 | 163.696 |