Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00566 ATGGACGGTTTTGGCAAAAACCCAGTTAGTTCTTTTGCTTTGTCGTTGTTTTTCATTTTGCATTCTTCTATTCTTTTTTGCCATGGAGCGTTTTCAATCGCACAGGGCCAATTTTTAAGAGAAAGCCAAACCTTGATTTCTGAGAATCAGCACTTTGAACTAGGGTTTTTCAGCCCCAGTAATTCCTCTCTGAGATATGTTGGGATATGGTATCACAGTATTGAACAACAAACGGTGATATGGGTGGCAAACAGAGGAAATCCAATTTCTGATCGAGCTGGGGCTTTGACGGTCGGAGACGACGGTAATTTGATCGTTCTTGATGGAAATAACAACACAGTTTGGTCAAGTAATGCTTCGATTTCACTACCTAATTCTACGGAGGCCACACTCACGGACGCAGGAAATTTGATCCTCTCAACCGGAGCGAATCCAGGAAGGGATTACTGGAGCAGCTTCGAGCACCCTACAGACTCGTTTTTACCACGCATGAGAGTGCTCGTCAATGCTGCAACGGGAGAGAATCGAGTTTTCACTTCATGGAAATCCGAAAGCGATCCATCCGTCGGAAACTATACTTTAGGCGTTGATCCTCGAGGATCCCCTCAGATTGTGATTTGGGAGGAACGAACTAGAAGGTGGAGAAGCGGCCATTGGGATTCACAGAAATTTAATGGCGTTCCCAACATGAGTGCGAGCTTGTTGTATGGATTTGGACTGTCCCAACCTGATGAAGAAGGAAATAGGTATTTCACTTACACACCACTGAACAGTTCGGATTATTTAAGGTTTAAGATACACTGGAATGGACAAGAGGAGCAGCTGAGGTGGGAACAAAATCTGCAGCAATGGACTGTCATGCAAGAACAGCCTGCTAGTGAATGCGAGCTCTACAACCTGTGCGGGAATTTCGCTGTCTGCACTCAATCAAATTCGCCGAAATGCAGTTGTATCGATGGATTTGTACCTAAGAACTCTGATCAATGGAGCAATGGCAACTGGTCTGGTGGGTGTGTGAGGAGGACTCCATTGCTATGCCAGAGGAAAGATGGGTTTTCCACCATGAATGGCTTGAAATTGCCTGATTTTGTGGATTTGGTGGTTGTGGGTTATATGGAAACTTGCAGAGTCAAATGCTTGGCCAATTGTTCTTGTACTGCATATGCTGATGTTACGGGGATCGGGTGCATGATTTGGAGCGGGGACTTGATCGATATGCAGCATTTTGATAACGCCGGGAGCAGTCTTAATATTCGTCTTGCCCATTCTGAAATAGGAAATGAGAAGAAACGATCAAGCTCCGTCATTATAGCGATCTCCATAGCTGGAGCAGTCTTCCTAGCTATAGTCATTGGGTTATTGTGGAGATACAGGGAAAGACTGAAAGCGGCGAACTACCGATCTACGACATTAGCAAGAGCAGAGATATTTCGAAGGAGTTTTCAGGACCGTCTGATTTTGGCATCGATGGGGACGAAACAAACGGACCAGAACTGCAATTTTACAGCTTTCAATTCTGTAGCAGCCGCTACAGACAACTTTTCTGATAAAAGCAAGCTCGGACAGGGAGGGTTCGGCCCGGTATATAAGGGAATGCTTCCGGGCAGGAAGGAAATTGCAGTGAAGAGACTCTCAGTAAGATCTGGGCAAGGCCTTGAAGAGTTTAAGAATGAAATTGCTCTTATTGCCAAGTTACAACATAGAAATCTTGTTAGACTTTTAGGTTACTGTGTTCAAGGGGAAGAAAAGATGCTGCTTTATGAATACATGCCTAATAAAACAGATTCATCGCAGCAGGCACTACTGGATTGGTCAACCCGTTTCAAAATCATCGAAGGGATTGCCCGGGGGCTCCTTTACCTCCATCGCGATTCGAGGCTTAGAATAATTCATAGAGATCTAAAGGCAAGTAACATCTTGTTGGATGAAGACATGAATCCTAAGATATCGGACTTTGGAATGGCGAGAATATTTGGGGCAAACGAAGACGAAGCAAATACGAATCGCGTTGTAGGGCACATAGTGAGTACAAATTTTATTTGCAACTATTCCTTTCAATATTCTTATGGCTATATGGCTCCTGAATATGCAATGGAAGGTCTATTTTCGGTGAAATCAGACGTTTATAGCTTTGGCGTTTTGTTAGCTTGGCATCTATGGAACGAGAGAAAATCGATGGATCTTCTAGATTCTTCTATTCGGGAAGCGAGTTCGAGTTCGAGCGATGAAGTTTTGAGATGCATACACGTGGGAATGTTGTGCGTACAAGACTCCCCGCTCTTGAGACCGATGATGTCCTCCCGTCGGACTATCGCGATTTCTTTTTACCTACCTTTTTTCTTCCTCTTCTTCTTCTTCCCTTTGATTGCATTCTCTCTTGATACCTTGACTGCATTGGAATCGCTCCGGTTCAACCAGACGATCGTCTCCTCCTCCGACTTTTTCGAGCTCGGGTTTTTTCAACCTGGAAATTCCGGCTGGTATTTGGGACTTTGGTATAAGGATATTCCGGTTCGGACTATCGTCTGGGTTGCTAATAACGAGAGTCCTCTCTCGGATTCTTTAGGAGTTTTGAAATTTGGGGATGGGAAACTGGTTCTTCTTGATTCGGATGGTAATTCAACGTGGTCAGCGACCAACCAAACTTTGGGGAGTAATCCGATTCTGCAGCTTCTTGATTCGGGAAACCTGGTTATCAGGGAAGAAAATGACGACGACCCAGAAAATTATCTCTGGCAAAGCTTTGATTTTCCGACGGATACTTTGCTGCCGGGAATGAAGCTAGGATGGGATTTGAATACTGGTCAGGACAGATATATAACGTCATGGAAAAACTTCGATAACCCTTTTCCCGGCGACTATTCTTTCAAACTCGAATACAAAGGATTCCCGGAGATTTTCTTAACAGACAAAAACAAAAGGGTATATCGAAGCGGGCCATGGAATGGGCAGAGATTCAGCGGTGTGCCGGAAATGACACCGATCGACGGTTTATCCTTCAGTTTTGTAACGAATCAGGAAGAAGTTTACTACTCGTTTTCGACAACGAACGCTTCGTTACATTCGAGATTAACAGTGACCGGAACTGGAATGCTCCAACGCTATATATGGATTCACAGCACCCAAACATGGAATTTATTCTGGTACGCTCCGAAAGATCAATGCGATTATTACAGAGAGTGCGGTCCGTTTGGGATATGCGATTCGAACTCATCTCCAGTTTGCCAATGCGCAACTGGGTTTCAGCCCAAGAATTTGCAGGCGTGGAATCTGAGAGACGGGTCAGACGGTTGCGTGAGAAAAACCGAGTTGAACTGTTCAAACGACAAGTTTTTGCTAAGGACGAAGATGAAGCTGCCGGAGAGTACGACGGCGGTTGTGAATTCGAGTATGAATATCGACGATTGCCGGGAAGTTTGCCTGCAGAATTGCTCTTGCACTGCTTTCGCCAACACTAACATCAGCAATGGCGGAAGTGGCTGCGTGACCTGGAGCGGCGAGCTCTGGGATTTGAGGGTTTATGCTGAAGGTGGCCAAAATCTGTACTTAAGATTGGCTGCCTCTGATCTTGAAAATTCAATGAGTTTTTCAAAACTGATTCTAAACTCTGACCGTGCAGAAGATGACGGCGACGGGGGTTCTCGGCGAGGTTCAACGGGGAAGAAGAGAGTGATTATTATAGCTGTCGTCGTCTCTGTCTGCGTCGCCATTGTTTTGTCTGGAGTTGCTTTCTGTTTTCTGGGGAAGAAGAAGACGCCGAAGACTCTGTTGAATAACCAGGTGGTTATACAGAATAAGAGGGATTGCTCCGGTGAATGTGGGGAAGATGAACTTGATCTTCCTCTGTTTGACTTCGCCACCATTGCCATGGCCACCGATAGCTTCTCCGAGGAAAATAAACTCGGACAAGGAGGTTTTGGCGGCGTTTATAAGGGTAGGTTGGTTGAAGGTCAAGAAATAGCAGTGAAGAGGCTGTCGAAGACGTCAGTTCAAGGAACGGAAGAGTTCAAGAACGAGATGAAGTTGATAGCCAGGCTTCAACACAGAAATCTGCTTCATCTTTTTTCTGCAGATAAGGCGAAAAAGCCATTGCTGGACTGGCCTAAACGTTTCAATATAATATGTGGGATAGCTAGAGGCCTTCTTTATCTTCACCAAGATTCCAGGTTTAGAATCATCCACAGAGATCTCAAGGCAAGTAACATTCTTCTCGACGGGGAAATGAATCCCAAAATTTCAGATTTCGGAATGGCGAGAATTTTCGGAACTGATCAAACTGAAGCAAATACTAGGAAAGTTGTCGGAACATACGGGTACATGTCTCCGGAATATGCCATGGACGGCCTCTTCTCGGTGAAATCCGACGTCTTCAGCTTCGGAGTTTTGGTTTTGGAAATCATTGGCGGTAAAAAGAATAGGGGATTTTACTATGCAAATAATGAGCTAAACCTTCTAGGATATGCTTGGAAACTATGGAAAGAAAATAAGGTTTTGGAGGTGACAGATCCAACCATGGGTGATTCATATTCACCAACAGAAGTTCTGAGATGCATACAAGTAGGTCTTTTATGCGTTCAAGAACGGACCGAAGATCGGCCAACCATGGCTTCCGTCGTCCTAATGCTTAGCAGCGATACGGCCACAATGCCGCAGCCCAAAAGCCCGGGATACTGCGTCGGAAGAAACGAAACGGACTCGTCAACGAGTAGGGTAGATGAATCATGCACTGTAAACCAAGTTACAGTCACAATACTTGAAGCTAGGTAG 4767 45.02 MDGFGKNPVSSFALSLFFILHSSILFCHGAFSIAQGQFLRESQTLISENQHFELGFFSPSNSSLRYVGIWYHSIEQQTVIWVANRGNPISDRAGALTVGDDGNLIVLDGNNNTVWSSNASISLPNSTEATLTDAGNLILSTGANPGRDYWSSFEHPTDSFLPRMRVLVNAATGENRVFTSWKSESDPSVGNYTLGVDPRGSPQIVIWEERTRRWRSGHWDSQKFNGVPNMSASLLYGFGLSQPDEEGNRYFTYTPLNSSDYLRFKIHWNGQEEQLRWEQNLQQWTVMQEQPASECELYNLCGNFAVCTQSNSPKCSCIDGFVPKNSDQWSNGNWSGGCVRRTPLLCQRKDGFSTMNGLKLPDFVDLVVVGYMETCRVKCLANCSCTAYADVTGIGCMIWSGDLIDMQHFDNAGSSLNIRLAHSEIGNEKKRSSSVIIAISIAGAVFLAIVIGLLWRYRERLKAANYRSTTLARAEIFRRSFQDRLILASMGTKQTDQNCNFTAFNSVAAATDNFSDKSKLGQGGFGPVYKGMLPGRKEIAVKRLSVRSGQGLEEFKNEIALIAKLQHRNLVRLLGYCVQGEEKMLLYEYMPNKTDSSQQALLDWSTRFKIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGMARIFGANEDEANTNRVVGHIVSTNFICNYSFQYSYGYMAPEYAMEGLFSVKSDVYSFGVLLAWHLWNERKSMDLLDSSIREASSSSSDEVLRCIHVGMLCVQDSPLLRPMMSSRRTIAISFYLPFFFLFFFFPLIAFSLDTLTALESLRFNQTIVSSSDFFELGFFQPGNSGWYLGLWYKDIPVRTIVWVANNESPLSDSLGVLKFGDGKLVLLDSDGNSTWSATNQTLGSNPILQLLDSGNLVIREENDDDPENYLWQSFDFPTDTLLPGMKLGWDLNTGQDRYITSWKNFDNPFPGDYSFKLEYKGFPEIFLTDKNKRVYRSGPWNGQRFSGVPEMTPIDGLSFSFVTNQEEVYYSFSTTNASLHSRLTVTGTGMLQRYIWIHSTQTWNLFWYAPKDQCDYYRECGPFGICDSNSSPVCQCATGFQPKNLQAWNLRDGSDGCVRKTELNCSNDKFLLRTKMKLPESTTAVVNSSMNIDDCREVCLQNCSCTAFANTNISNGGSGCVTWSGELWDLRVYAEGGQNLYLRLAASDLENSMSFSKLILNSDRAEDDGDGGSRRGSTGKKRVIIIAVVVSVCVAIVLSGVAFCFLGKKKTPKTLLNNQVVIQNKRDCSGECGEDELDLPLFDFATIAMATDSFSEENKLGQGGFGGVYKGRLVEGQEIAVKRLSKTSVQGTEEFKNEMKLIARLQHRNLLHLFSADKAKKPLLDWPKRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDGEMNPKISDFGMARIFGTDQTEANTRKVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIIGGKKNRGFYYANNELNLLGYAWKLWKENKVLEVTDPTMGDSYSPTEVLRCIQVGLLCVQERTEDRPTMASVVLMLSSDTATMPQPKSPGYCVGRNETDSSTSRVDESCTVNQVTVTILEAR 1588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 46476793 46485682 + Bda005988.1 Bda02g00566 2861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00566 1588 SMART egf_5 294 339 IPR000742 -
Bda02g00566 1588 SMART egf_5 1054 1099 IPR000742 -
Bda02g00566 1588 Pfam Protein kinase domain 1296 1359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00566 1588 Pfam Protein kinase domain 515 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00566 1588 Gene3D Transferase(Phosphotransferase) domain 1 588 772 - -
Bda02g00566 1588 CDD PAN_AP_plant 342 421 - -
Bda02g00566 1588 ProSiteProfiles Protein kinase domain profile. 1295 1549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00566 1588 ProSiteProfiles Protein kinase domain profile. 514 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00566 1588 ProSiteProfiles PAN/Apple domain profile. 1106 1186 IPR003609 -
Bda02g00566 1588 Pfam Protein tyrosine and serine/threonine kinase 1362 1540 IPR001245 GO:0004672|GO:0006468
Bda02g00566 1588 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Bda02g00566 1588 ProSiteProfiles PAN/Apple domain profile. 346 421 IPR003609 -
Bda02g00566 1588 ProSiteProfiles Bulb-type lectin domain profile. 793 912 IPR001480 -
Bda02g00566 1588 MobiDBLite consensus disorder prediction 1551 1572 - -
Bda02g00566 1588 CDD B_lectin 37 156 IPR001480 -
Bda02g00566 1588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1392 1404 IPR008271 GO:0004672|GO:0006468
Bda02g00566 1588 Gene3D - 29 153 IPR036426 -
Bda02g00566 1588 Gene3D - 789 915 IPR036426 -
Bda02g00566 1588 SMART ntp_6 1106 1185 IPR003609 -
Bda02g00566 1588 SMART ntp_6 347 420 IPR003609 -
Bda02g00566 1588 Pfam Domain of unknown function (DUF3403) 1544 1588 IPR021820 GO:0004674
Bda02g00566 1588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Bda02g00566 1588 CDD PAN_AP_plant 1102 1186 - -
Bda02g00566 1588 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 187 IPR036426 -
Bda02g00566 1588 SMART blect_4 799 918 IPR001480 -
Bda02g00566 1588 SMART blect_4 36 156 IPR001480 -
Bda02g00566 1588 PANTHER - 16 767 - -
Bda02g00566 1588 PANTHER - 778 1587 - -
Bda02g00566 1588 ProSiteProfiles EGF-like domain profile. 291 327 IPR000742 -
Bda02g00566 1588 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 767 - -
Bda02g00566 1588 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 778 1587 - -
Bda02g00566 1588 Gene3D Phosphorylase Kinase; domain 1 480 587 - -
Bda02g00566 1588 CDD B_lectin 800 918 IPR001480 -
Bda02g00566 1588 SUPERFAMILY Protein kinase-like (PK-like) 1280 1542 IPR011009 -
Bda02g00566 1588 SMART serkin_6 514 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00566 1588 SMART serkin_6 1295 1542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00566 1588 Gene3D Transferase(Phosphotransferase) domain 1 1354 1546 - -
Bda02g00566 1588 CDD EGF_CA 294 325 - -
Bda02g00566 1588 Gene3D Transferase(Phosphotransferase) domain 1 1282 1353 - -
Bda02g00566 1588 Pfam S-locus glycoprotein domain 976 1085 IPR000858 GO:0048544
Bda02g00566 1588 Pfam S-locus glycoprotein domain 214 325 IPR000858 GO:0048544
Bda02g00566 1588 Pfam PAN-like domain 346 406 IPR003609 -
Bda02g00566 1588 Pfam PAN-like domain 1106 1171 IPR003609 -
Bda02g00566 1588 SUPERFAMILY Protein kinase-like (PK-like) 501 800 IPR011009 -
Bda02g00566 1588 SUPERFAMILY alpha-D-mannose-specific plant lectins 827 982 IPR036426 -
Bda02g00566 1588 Pfam D-mannose binding lectin 78 182 IPR001480 -
Bda02g00566 1588 Pfam D-mannose binding lectin 840 944 IPR001480 -
Bda02g00566 1588 ProSitePatterns Protein kinases ATP-binding region signature. 1301 1323 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00566 Bda-Chr2:46476793 Bda15g00939 Bda-Chr15:17293773 1.99E-147 dispersed
Bda02g00566 Bda-Chr2:46476793 Bda02g00574 Bda-Chr2:46575132 9.85E-78 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69502 PF00069 Pkinase 1.30E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00566 - - tcc:18596995 1395.18