Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00574 ATGGCTGTAACTCTTCTCCTGATTCTCTTCTTCTTCTTCTTCTCAACCCCGCTTAGCGCACAGCCAGACTTCCGTTACCGCGTATGCATGGACGGCAATGGGAATTACACTGCCAACGACGCCTACAGCGCCAACCTCCACAACCTCCTCTCTTCCATTTTGACACTTGACTACGTCTACTACGGATTTTTCAATTTCTCTCTTGGCCAAAATTCCGACGCCGCCAACGCAATCGGGCTTTGCAGGGGCGACATCGATTCCGCTGCTTGCCGGAGCTGCCTAAACGACTCTTGGATCCTCCTCCCGCGGCTTTGTCCAAATCGGAAGGAAGCTATCGGGTGGTACGATACTTGCATGTTGAAATACTCCAATCGAAGCATATTTGGATTGATGGAGACGGATCCAGCTCATATTATATGGAATTTATTAAATGTTTCGGATCGGGATCAGTATTACAGAGATCTTCGGACATTGCTGGATGATTTGAAGGGTAAAGCTGCGGGCGGTAGCTCTCTATTAAAATATGGGGTAGGAAGTGCCTGGACGTCGAATTTCAGAACTATCTATGCCCTTCTACAGTGTACACCTGATTTGTCTGAGGAAGAATGCGACAAGTGCTTGACTACCTCGTATAGTAGAATTCCATCTTGTTGCTCTGGGAGTGTTATAGTGGGTTCACCTAGTTGTTATTTGAGATACGAAGAGTATCGGTTCTATCAGCCTTCTTTGCCGCAATCGCCGCCGTCTCTGCTATCCCCTCCCCCAGCAAGAATAGGCGAAGAAGGAGAACAAAGTAACAGAGCTAGAACCATCATTATCATTGTTGTCACCTCTGTTGCTGGATTGATCCTGATTGTCGCCATTTCTGTTGTCTTAATATTTAGAAAGAGAAGGCATGCAAATTCAATGGAGAGAGGAGAGAGTCTTCCTTTGCGAGAACGAGACGAGGATGGAATATTCACATCTGAGACGCTGCAATTTGACTTTGCTGTTATTAAGGCAGCAACAGATGATTTTTCTGTTGCAAACAAGCTTGGACAAGGTGGGTTCGGACCCGTTTATAAGGGTAAGCTATCTAACGGAGAAAGCATTGCCGTGAAGAGGCTTTCGAGGAACTCAGGCCAGGGAGACCTTGAATTTAAAAATGAAGTAGTCTTGGTCGGTAAGCTTCAACACCGGAACTTAGTCAGGCTCTTAGGATTCAGCTTGCAAGGAAATGAGAGGCTTCTTGTTTATGAATTTGTGCCCAATGCAAGCCTTGATCAATTTATATTTGATCCACAAAGACGGACAAATTTAGATTGGGACAGGAGATTCAAAATCATAGGTGGCATTGCTCGAGGACTACTCTATCTTCATGAAGACTCTCGGCTTAGAATTATTCATCGTGATCTCAAAGCCAGTAATATTCTGTTAGATGCAGAAATGAATGCCAAAATAGCAGATTTTGGAATGGCGAAACTGTTTGAAGTGGACGAGACGCAAGGGAACACTAGCAGGGTAGTGGGTACATATGGTTATATGTCACCAGAGTATGTCCTCCACGGACAGTTTTCAGTAAAATCTGATGTGTACAGCTTCGGCGTAATAATTCTTGAGATAATTAGCGGTCCAAAAGAACAATTGCTTCCGCAACGGAGAAAGAGTGGAAGACCTCTTGAGTTTTGTTTGGAACAGCTGGAGAGAAGGAAAAGGTTCAAACGTAATAGACCCAACACTGACTTCAGGCTCCAAAAATGA 1740 44.77 MAVTLLLILFFFFFSTPLSAQPDFRYRVCMDGNGNYTANDAYSANLHNLLSSILTLDYVYYGFFNFSLGQNSDAANAIGLCRGDIDSAACRSCLNDSWILLPRLCPNRKEAIGWYDTCMLKYSNRSIFGLMETDPAHIIWNLLNVSDRDQYYRDLRTLLDDLKGKAAGGSSLLKYGVGSAWTSNFRTIYALLQCTPDLSEEECDKCLTTSYSRIPSCCSGSVIVGSPSCYLRYEEYRFYQPSLPQSPPSLLSPPPARIGEEGEQSNRARTIIIIVVTSVAGLILIVAISVVLIFRKRRHANSMERGESLPLRERDEDGIFTSETLQFDFAVIKAATDDFSVANKLGQGGFGPVYKGKLSNGESIAVKRLSRNSGQGDLEFKNEVVLVGKLQHRNLVRLLGFSLQGNERLLVYEFVPNASLDQFIFDPQRRTNLDWDRRFKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNAKIADFGMAKLFEVDETQGNTSRVVGTYGYMSPEYVLHGQFSVKSDVYSFGVIILEIISGPKEQLLPQRRKSGRPLEFCLEQLERRKRFKRNRPNTDFRLQK 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 46575132 46577952 - Bda006000.1 Bda02g00574 2869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00574 579 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Bda02g00574 579 Gene3D Phosphorylase Kinase; domain 1 302 414 - -
Bda02g00574 579 Gene3D - 22 126 IPR038408 -
Bda02g00574 579 Gene3D - 134 238 IPR038408 -
Bda02g00574 579 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 544 - -
Bda02g00574 579 Gene3D Transferase(Phosphotransferase) domain 1 415 573 - -
Bda02g00574 579 Pfam Protein tyrosine and serine/threonine kinase 341 541 IPR001245 GO:0004672|GO:0006468
Bda02g00574 579 SUPERFAMILY Protein kinase-like (PK-like) 319 538 IPR011009 -
Bda02g00574 579 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 544 - -
Bda02g00574 579 Pfam Salt stress response/antifungal 146 236 IPR002902 -
Bda02g00574 579 Pfam Salt stress response/antifungal 29 124 IPR002902 -
Bda02g00574 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Bda02g00574 579 ProSiteProfiles Gnk2-homologous domain profile. 24 127 IPR002902 -
Bda02g00574 579 ProSiteProfiles Protein kinase domain profile. 339 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00574 579 SMART serkin_6 339 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00574 Bda-Chr2:46575132 Bda10g00812 Bda-Chr10:42479353 7.73E-87 dispersed
Bda09g01294 Bda-Chr9:44698601 Bda02g00574 Bda-Chr2:46575132 6.64E-64 dispersed
Bda13g00631 Bda-Chr13:7291328 Bda02g00574 Bda-Chr2:46575132 4.07E-36 dispersed
Bda02g00566 Bda-Chr2:46476793 Bda02g00574 Bda-Chr2:46575132 9.85E-78 proximal
Bda02g00574 Bda-Chr2:46575132 Bda02g00575 Bda-Chr2:46595495 9.06E-49 tandem
Bda08g00361 Bda-Chr8:3709811 Bda02g00574 Bda-Chr2:46575132 1.13E-119 transposed
Bda02g00574 Bda-Chr2:46575132 Bda09g01293 Bda-Chr9:44693880 3.70E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69503 PF07714 PK_Tyr_Ser-Thr 9.60E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00574 - - mnt:21389744 620.157