Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00600 ATGGCTATAGCAGCCCCAGGGCAGCTCAACCTCAACGAGTCCCCTTCTTGGGGATCTAGAAGTGTCGATTGCTTTGAAAAATTAGAGCAGATCGGCGAGGGAACTTATGGGCAAGTTTATATGGCAAAAGAAATAAAGACAGGTGAAATTGTTGCTTTGAAGAAAATACGAATGGACAATGAAAGAGAGGGGTTTCCAATAACAGCCATTCGAGAAATCAAAATTTTAAAGAAGCTGCATCATGAGAATGTTATCAAATTGAAAGAGATTGTAACATCTCCAGGTATTCTTTGTTGCTGTTCGTGGGATGCAGATGGCAACAAGTATAAGGGTGGCATCTACATGGTATTTGAGTATATGGACCATGATCTAACCGGACTTGCAGATCGTCCTGGTATGAGATTTTCAGTACCACAAATCAAGTGTTACATGAAACAGCTTTTGACTGGACTTTATTATTGTCACGTGAACCAAGTACTACACCGAGACATCAAAGGGTCTAACCTTCTCATCGACAATGAAGGAAATTTGAAGCTTGCTGATTTTGGGCTTGCACGATCATTCTCTAATGATCACAATGCAAATCTTACAAATCGTGTAATTACCTTATGGTATAGACCTCCAGAATTGCTGCTTGGAGCAACAAAATATGGTCCAGCAGTTGATATGTGGTCTGTCGGTTGTATTTTTGCTGAACTTTTACACGGGAAGCCAATTTTCCCGGGAAAGGATGAGCCAGAGCAATTGAATAAGATTTTTGAGTTATGCGGTGCTCCCGATGAAGTTAATTGGCCTGGGGTTTCTAAGATTCCTTGGTATAACAATTTCAAACCAACAAGGCCAATGAAGAGGCGAATTAGGGAGGTTTTCAGGCACTTTGACCGGCATGCTTTAGAGCTATTAGAGAGGATGCTCACTCTTGATCCCTCTCAGAGGATATCTGCAAAGGATGCGCTTGATGCCGAGTATTTTTGGACTGATCCCTTGCCCTGTGATCCGAAGAGTTTACCCAAGTATGAATCATCCCACGAGTTTCAAACAAAGAAAAAACGGCAGCAGCAACGACAGCATGAAGAGACTGCAAAACGTCAGAAACTGCAACACCCACCACAACATAATCGCCTCCCTCCCATCCAGCAGTCTGGGCAGGCTCATGCTCAGATACGACCAGGAGCCAACCAGCCTGGCCATGGCTCTCAACAGCCAGTTGCTGCAGGCCCCAGCCATCATTTTGGGAAGCCTCGTGGCCCCTCGGGAGGTGGTCCTGGCAGGTACCCGGGGGGTGGTAATCCTGCAGGGGGATACAACCATCCCAACCGGGGAGGCCAAGGAGGAGGAGGAGGTGGAGGCTACAGCAGTGGGCAGTATCCGCAAGGGCGAGGCCCACCGTATGGGTCTAGTGGCATGTCCAATGCTGCTCCTCGGGGAGGCGGAGGTAGTGGTTATGGAGTCCCTCCAAACTATCCGCAGGGAGGAGGGCCGTATGGTAGCTCTGGCACTGGTCGTGGGTCTAACATGATGGGCGGAAGCCGCAATCAACAATATGGATGGCAGCAGTGA 1560 47.69 MAIAAPGQLNLNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGILCCCSWDADGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMKQLLTGLYYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPPQHNRLPPIQQSGQAHAQIRPGANQPGHGSQQPVAAGPSHHFGKPRGPSGGGPGRYPGGGNPAGGYNHPNRGGQGGGGGGGYSSGQYPQGRGPPYGSSGMSNAAPRGGGGSGYGVPPNYPQGGGPYGSSGTGRGSNMMGGSRNQQYGWQQ 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 46856943 46866020 - Bda006029.1 Bda02g00600 2895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00600 519 MobiDBLite consensus disorder prediction 373 401 - -
Bda02g00600 519 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 454 - -
Bda02g00600 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bda02g00600 519 PANTHER CELL DIVISION PROTEIN KINASE 5 454 - -
Bda02g00600 519 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00600 519 MobiDBLite consensus disorder prediction 335 519 - -
Bda02g00600 519 CDD STKc_CDK9_like 25 324 - -
Bda02g00600 519 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Bda02g00600 519 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Bda02g00600 519 MobiDBLite consensus disorder prediction 337 366 - -
Bda02g00600 519 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00600 519 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00600 519 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Bda02g00600 519 MobiDBLite consensus disorder prediction 493 519 - -
Bda02g00600 519 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02188 Bda-Chr1:57847805 Bda02g00600 Bda-Chr2:46856943 1.61E-94 dispersed
Bda02g00600 Bda-Chr2:46856943 Bda03g00348 Bda-Chr3:2930185 9.34E-122 dispersed
Bda14g00385 Bda-Chr14:2781591 Bda02g00600 Bda-Chr2:46856943 2.83E-87 dispersed
Bda15g00140 Bda-Chr15:3843627 Bda02g00600 Bda-Chr2:46856943 8.93E-87 dispersed
Bda15g00504 Bda-Chr15:8133713 Bda02g00600 Bda-Chr2:46856943 8.64E-77 dispersed
Bda02g00600 Bda-Chr2:46856943 Bda11g00934 Bda-Chr11:9121454 1.62E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69504 PF00069 Pkinase 1.20E-74 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00600 K08819 - mnt:21403150 873.233