Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda02g00620 | ATGACTTCTTCAGTCCTCGTCATTGTTGGTGAAGAATTAGTTGATGCTCTTCACTCTGTATCTATTCAAGATCAGGGAAAAGTACAAACTAAGGTAGAGATGCAACAAGTACGGAGTGGGGATCATGGAGGAGTTTGTGCAATATGCTTGAATAAGATAAATCTTCAAGAAACTGCTCTTGTCAAAGGTTGCGAGCATGCCTACTGTGTAAACTGCATCCTTCAGTGGGCTTCTTACAGTCAGAAACAAGCTTGCAAGTGCCCTCAATGTAAACATCCGTTCGAGTTCCTCAATGTCCATAGAACGCTTGATGGAAGCATCCAAGATTTCATGTTTGAGGAGAGTGTGTGCCTACTTCTGAGAGCTTCATGGTTCAAGCCGTTGATCGTGGAGGATCAACAGGAAGAAGCTTATGATGACTACGAAGATTATTTTCCGTACGAAGACGAGGAGGATGAAATCGAAGAAGTTTACTTTAGGTCGATCGTCTGCAAGTCTCCGAATTGGCAATAG | 513 | 42.88 | MTSSVLVIVGEELVDALHSVSIQDQGKVQTKVEMQQVRSGDHGGVCAICLNKINLQETALVKGCEHAYCVNCILQWASYSQKQACKCPQCKHPFEFLNVHRTLDGSIQDFMFEESVCLLLRASWFKPLIVEDQQEEAYDDYEDYFPYEDEEDEIEEVYFRSIVCKSPNWQ | 170 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 47137650 | 47140381 | - | Bda006050.1 | Bda02g00620 | 2915 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda02g00620 | 170 | SUPERFAMILY | RING/U-box | 45 | 97 | - | - | |
| Bda02g00620 | 170 | ProSitePatterns | Zinc finger RING-type signature. | 64 | 73 | IPR017907 | - | |
| Bda02g00620 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 46 | 91 | IPR001841 | - | |
| Bda02g00620 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 115 | IPR013083 | - | |
| Bda02g00620 | 170 | PANTHER | - | 3 | 161 | - | - | |
| Bda02g00620 | 170 | Pfam | Ring finger domain | 46 | 91 | IPR001841 | - | |
| Bda02g00620 | 170 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 3 | 161 | - | - | |
| Bda02g00620 | 170 | SMART | ring_2 | 46 | 90 | IPR001841 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda02g00620 | - | - | cit:102609827 | 198.749 |