Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00643 | ATGACATGTACTACCTGTGCTGAATCTGTTGAATGTGCCCTTCTAATGTTTGAGGGAGTGAAAAAAGCAGCAGTTGGTTTAGCTTTGGAAGAAGCAAGGGTGCATTTTGATTCTAACCTCATCAATGCTGAGCAAGTTGCTCAGGCAGTAGAAGATGCTGGCTTTGGAGCTGAGATAATAAATTCTGGAAATGATGTTAACTTAGCTCATCTAAAACTTCAAGGAATTAGTTCTCCAGCAGATATGACCGCTATAAAATCTTTGCTTGAAATAGCTGTTGGTGTAGATTGTGTTGACATGGACTTGAAAGGACAAACGGTTGCCATCAGCTATGACCCAGACCTCACCGGTCCAAGGTCACTCATACAGTGCATAAGGGAATCAGGCCAACCACACACTTTTGATGCAAACTTGTATGCTCCTCCAAGACGAAGAGATACAGAGCAACTTCAGGAAATTCAGACTTACAGAAACCAATTCCTGCTCAGCTGCCTGTTTTCTGCTCCTGTAATTTTATTTTCCATGGTACTTCCCAAGCTTCCCCCTTATGGAAATTGGTTAGGGTACAAGATTCACAACATGTTTACTGTTGGGATGCTTCTTAGATGGATTCTTTGTACACCTGTTCAGTTTATTATTGGCCGAAGATTTTATGTGGGATCATACTATGCATTGAGGCGAAAATCTGCCAATATGGAAGTTCTAGTGGCATTAGGCACTAATGCTGCTTACTTTTATTCTGTATACATAGTAATAAAATCAATGGCCTCAGATGGGTTTGAAGGACAAGATTTCTTTGAAACTAGTTCCATGCTAATATCCTTTATTCTCTTGGGGAAATACTTGGAGGTAGTGGCTAGAGGAAAAACCTCCGATGCTTTAGCTAAGCTTGCGGATCTTTCTCCCGATGTAGCTCATCTGTTAAAGTTAGACGATGATGGGAACGTTATCTTAGAGATGGAAATCGACACTCAATTGATACAGAGGAATGACATTATCAAGATTGTTCCAGGAGAAAAAGTTCCAGTTGACGGGATTGTTATGAATGGTCATAGTCATGTTAACGAGAGTATGATCACAGGAGAGGCTAGACCAACTTTTAAAAAAGTTGGTGACAAGGTTATTGGCGGTACTGTTAATGAAAATGGATGCTTATTGGTTAGAGCCACCCATGTGGGGTCTGATACTGCACTATCGCAAATTGTTCAACTTGTTGAGGATGCGCAACTTGCTAGAGCTCCTGTTCAAAAATTAGCTGACCAGATATCAAAATTTTTTGTTCCTGCTGTTGTTCTCGCAGCATTTCTAACATGGCTTGCGTGGTTTGTTTCTGGAGAAACGCATATATATCCTAGCCAATGGATACCAAAGGACATGGATGGATTTGAGCTTGCATTGCAGTTTGGCATTTCTGTACTAGTGGTTGCCTGCCCATGCGCTCTTGGTCTAGCAACACCAACAGCAGTCATGGTTGCCTCAGGGAAAGGTGCTTCTCAAGGGGTGCTTATCAAAGGTGGAAACGCCTTGGAAAAAGCACACAAGGTGAAAACTATTGTCTTTGATAAGACTGGAACACTAACAGTTGGCCGGCCGGTGGTAGTTAGTGCTGTGCTCTTCTCCCGTTTTTCAATGGAGGAATTCTGTGATATGACTGTAGCTACAGAGGCAAATAGCGAACATCCATTAGCAAAAGCTGTGGTAGAACATGCAAAGAAGCTGAGGCAGAGATTTGGGTGCCAAAATGAATGCCTGACAGAGGTGAAGGACTTTGAGGTGCACCCAGGAGCAGGTGTTGGTGGAAAGGTTGGAGACAGATCAGTTTTTGTGGGAAACAAAAGACTCATGCATGCTTGTAATATTCCAATCGTTCTCGAAGTAGAGGAATATATTTCAGAACATGAGCAGCTTGCTCGAACATGTGTACTAGTTGCCATTGATGGAAAGATTGCTGGTGCTTTTGCTGTTACTGATCCTGTAAAGCCTGAGGCTGGGATTGTTATATCCTTTCTTCGTTCGAAGGGTATCTCAAGCATCATGGTCACTGGTGACAACTGGTCTACAGCAACAGCGATTGCAAAGGAGGTGGGCATTGACAAAGTCTTTGCCGAGACTGATCCAATTGGAAAAGCGGACAAGATTAAAGATTTGCAGATGCAAGGGATCATAGTGGCAATGGTAGGGGATGGAATCAATGACTCACCTGCCTTAGTTGCAGCGGATGTTGGTATGGCAATTGGGGCCGGAACAGATATTGCAATAGAAGCAGCTGACATAGTTCTCATAAAGAGCAATTTGGAAGATGTTGTTACAGCTGTAGATCTTTCAAGAAAGACCATGTCTCGTATTTGGCTTAACTACATTTGGGCCCTCGGCTATAATATTCTTGGTATGCCAATTGCTGCTGGAATCTTATACCCCTTCACTGGAATAAGGTTGCCACCATGGTTAGCTGGTGCTTGCATGGCTGCTTCATCCCTAACTGTTGTTTGTTCTTCTCTATTGTTGCAATCATACAAGAAGCCTCTGCATATTGAATCTACCTGA | 2544 | 42.73 | MTCTTCAESVECALLMFEGVKKAAVGLALEEARVHFDSNLINAEQVAQAVEDAGFGAEIINSGNDVNLAHLKLQGISSPADMTAIKSLLEIAVGVDCVDMDLKGQTVAISYDPDLTGPRSLIQCIRESGQPHTFDANLYAPPRRRDTEQLQEIQTYRNQFLLSCLFSAPVILFSMVLPKLPPYGNWLGYKIHNMFTVGMLLRWILCTPVQFIIGRRFYVGSYYALRRKSANMEVLVALGTNAAYFYSVYIVIKSMASDGFEGQDFFETSSMLISFILLGKYLEVVARGKTSDALAKLADLSPDVAHLLKLDDDGNVILEMEIDTQLIQRNDIIKIVPGEKVPVDGIVMNGHSHVNESMITGEARPTFKKVGDKVIGGTVNENGCLLVRATHVGSDTALSQIVQLVEDAQLARAPVQKLADQISKFFVPAVVLAAFLTWLAWFVSGETHIYPSQWIPKDMDGFELALQFGISVLVVACPCALGLATPTAVMVASGKGASQGVLIKGGNALEKAHKVKTIVFDKTGTLTVGRPVVVSAVLFSRFSMEEFCDMTVATEANSEHPLAKAVVEHAKKLRQRFGCQNECLTEVKDFEVHPGAGVGGKVGDRSVFVGNKRLMHACNIPIVLEVEEYISEHEQLARTCVLVAIDGKIAGAFAVTDPVKPEAGIVISFLRSKGISSIMVTGDNWSTATAIAKEVGIDKVFAETDPIGKADKIKDLQMQGIIVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLIKSNLEDVVTAVDLSRKTMSRIWLNYIWALGYNILGMPIAAGILYPFTGIRLPPWLAGACMAASSLTVVCSSLLLQSYKKPLHIEST | 847 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 47391153 | 47397501 | - | Bda006074.1 | Bda02g00643 | 2938 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00643 | 847 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 232 | 835 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bda02g00643 | 847 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 521 | 527 | IPR018303 | - | |
Bda02g00643 | 847 | PRINTS | P-type cation-transporting ATPase superfamily signature | 673 | 683 | - | - | |
Bda02g00643 | 847 | PRINTS | P-type cation-transporting ATPase superfamily signature | 355 | 369 | - | - | |
Bda02g00643 | 847 | PRINTS | P-type cation-transporting ATPase superfamily signature | 651 | 662 | - | - | |
Bda02g00643 | 847 | PRINTS | P-type cation-transporting ATPase superfamily signature | 519 | 533 | - | - | |
Bda02g00643 | 847 | PRINTS | P-type cation-transporting ATPase superfamily signature | 749 | 761 | - | - | |
Bda02g00643 | 847 | PRINTS | P-type cation-transporting ATPase superfamily signature | 726 | 745 | - | - | |
Bda02g00643 | 847 | Gene3D | - | 530 | 659 | IPR023299 | GO:0000166 | |
Bda02g00643 | 847 | PANTHER | ATP7, ISOFORM B | 1 | 844 | - | - | |
Bda02g00643 | 847 | SFLD | Haloacid Dehalogenase | 501 | 778 | - | - | |
Bda02g00643 | 847 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 264 | 511 | IPR023298 | - | |
Bda02g00643 | 847 | SFLD | p-type atpase | 501 | 778 | IPR044492 | - | |
Bda02g00643 | 847 | PRINTS | Copper-transporting ATPase 1 signature | 48 | 68 | - | - | |
Bda02g00643 | 847 | PRINTS | Copper-transporting ATPase 1 signature | 160 | 181 | - | - | |
Bda02g00643 | 847 | PRINTS | Copper-transporting ATPase 1 signature | 19 | 42 | - | - | |
Bda02g00643 | 847 | PRINTS | Copper-transporting ATPase 1 signature | 195 | 215 | - | - | |
Bda02g00643 | 847 | PRINTS | Copper-transporting ATPase 1 signature | 215 | 240 | - | - | |
Bda02g00643 | 847 | ProSiteProfiles | Heavy-metal-associated domain profile. | 68 | 134 | IPR006121 | GO:0046872 | |
Bda02g00643 | 847 | CDD | HMA | 1 | 58 | IPR006121 | GO:0046872 | |
Bda02g00643 | 847 | SUPERFAMILY | HAD-like | 517 | 832 | IPR036412 | - | |
Bda02g00643 | 847 | Pfam | haloacid dehalogenase-like hydrolase | 515 | 740 | - | - | |
Bda02g00643 | 847 | SUPERFAMILY | HMA, heavy metal-associated domain | 1 | 63 | IPR036163 | GO:0046872 | |
Bda02g00643 | 847 | Pfam | E1-E2 ATPase | 319 | 498 | - | - | |
Bda02g00643 | 847 | Gene3D | - | 287 | 409 | - | - | |
Bda02g00643 | 847 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 1 | 844 | - | - | |
Bda02g00643 | 847 | Gene3D | - | 510 | 776 | IPR023214 | - | |
Bda02g00643 | 847 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 272 | 803 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda02g00643 | 847 | Pfam | Heavy-metal-associated domain | 1 | 55 | IPR006121 | GO:0046872 | |
Bda02g00643 | 847 | CDD | P-type_ATPase_Cu-like | 160 | 836 | - | - | |
Bda02g00643 | 847 | SUPERFAMILY | Calcium ATPase, transduction domain A | 320 | 405 | IPR008250 | - | |
Bda02g00643 | 847 | Gene3D | - | 1 | 62 | - | - | |
Bda02g00643 | 847 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 59 | IPR006121 | GO:0046872 | |
Bda02g00643 | 847 | SUPERFAMILY | HMA, heavy metal-associated domain | 64 | 132 | IPR036163 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00643 | Bda-Chr2:47391153 | Bda09g00041 | Bda-Chr9:615048 | 2.70E-14 | dispersed | |
Bda02g00638 | Bda-Chr2:47308779 | Bda02g00643 | Bda-Chr2:47391153 | 0 | proximal | |
Bda02g00643 | Bda-Chr2:47391153 | Bda02g00644 | Bda-Chr2:47405113 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00643 | K17686 | - | csin:114270619 | 1347.8 |