Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00644 ATGTTTAGATTCTGTGGAAGGAGGATCCTTGAAGCCAATGAGGATGATCTTAAGGTGCCTTTAAATGGATCAATTCTCAATAACGTAGACAAACCTAAGGAAATCAATAACGATTTTCAGGAACAAGATATAGCAGTATGTCGACTAAGAATTAAAGGAATGACATGTACTACCTGTGCTGAATCTGTTGAAAGTGCCCTTCTAATGTATGAGGGAGTGAAAAAAGCAGCAGTTGGTTTAGCTTTGCAAGAAGCAAGGGTGCATTTTGATTCTAACCTCATCAATGCTGAGCAAGTTGCTCAGGCAGTCGAAGATGCTGGCTTTGGAGCTGAGATAATAAATTCTGGAAATGATGTTAACATAGCTCATCTAAAACTTCAAGGAATTAGTTCTCCAGTACATATGACCACTATAAAATCTTTGCTTGAAGTAGCTGTTGGTGTAGATCGTGTTGACATGGACTTGAAAGGACAAACGGTTGCCATCAGCTATGACCCAGACTTCACTGGTCCAAGGTCACTTATACAGTGCATAAGGGAATCAGGCCAAGGTCCAGACACTTTTGATGCAAACTTGTTTGCTCCTTCAAGACGAAGAGATACAGAGCAACTTCATGAAATTCAGACTTACAGAAACCAATTCCTGCTCAGCTGCCTGTTTTCTGCTCCTGTATTTTTATTTGCCATGGTGCTTCCCATGCTCCCCCCTTATGGAAATTGGTTAGGGTACAAGATTCATAACATGTTTACAGTTGGGATGCTTCTTAGATGGATTCTTTGCACACCTGTTCAGTTTATTGTTGGCCGAAGATTTTATGTGGGATCATACTATGCATTGAGGCGAAAATCTGCTAATATGGAAGTTCTAGTGGCATTAGGCACTAATGCTGCTTACTTTTATTCTGTATACACAGTAATGAAATCATGGGCCTCAGATGGGTTTGAAGGACAAGATTTCTTTGAAACTAGTTCCATGCTAATATCCTTTATTCTCTTGGGGAAATACTTGGAGGTAGTGGCTAGAGGAAAAACCTCCGATGCTTTAGCTAAGCTTGCGGATCTTGCTCCTGATGTAGCTCATTTGTTAAAATTAGACGATGATGGGAACGTCATCTTAGAGATGGAAATCGACACTCAATTGATACAGAGGAATGACATTATAAAGATTGTTCCAGGCGAAAAAGTTCCAGTTGACGGGATTGTTATGAATGGTCATAGTCATGTTAATGAGAGTATGATCACAGGAGAGGCTAGACCCACTTTTAAAAAAGCTGGTGACAAGGTTATTGGCGGCACTGTCAATGAAAATGGATGCTTATTGGTTAAAGCCACCCATGTGGGGTCTGATACTGCACTATCTCAAATTGTTCAACTTGTGGAGGCTGCTCAACTTGCTAGAGCACCTGTTCAGAAATTAGCTGACCAGATATCAAAATTTTTTGTTCCTGCTGTTGTTCTCGCAGCATTTCTAACATGGCTTGCGTGGTTCGTTTCTGGAGAAATGCATATATATCCTAGGCACTGGATACCAAAGGCCATGGATGGATTTGAGCTTGCATTTCAGTTTGGCATTTCTGTACTAGTGGTTGCCTGCCCATGCGCTCTTGGTCTAGCAACACCAACAGCAGTCATGGTTGCCTCAGGGAAAGGTGCTTCCCAAGGGGTGCTTATCAAAGGTGGAAGCGCTCTGGAAAAAGCACACAAGGTGAAAACTATTGTCTTTGATAAGACTGGAACACTAACGGTTGGCCGGCCAGTGGTAGTTAGTGCTGTGCTCTTCTCCAGTTTTTCAATGGAGGAATTCTGTAATATGACTGTAGCTACAGAGACAAATAGCGAACATCCATTAGCAAAAGCTGTGGTAGATCATGCAAAGAAGCTGAGGCAGAAATTTGGGTGCCAAAATGAATGCCTGACAGAGGTGAAGGACTTTGAGGTGCACCCAGGAGCAGGTGTTGGTGGAAAAGTTGGAGACAGATCAGTTTTTGTTGGAAACAAAAGACTCATGCATGCTTGTAATATTCCAATCGGTCTCGAAGTAGAGCAATATATGTCAGAACATGAGCAGCTTGCTCGAACATGTGTATTAGTTGCCATTAATGGAAAGATTGCTGGTGCTTTTGCTGTTACTGATCCTGTAAAGCCGGAGGCTGGGATTGTCATTTCCTTTCTTCGTTCGAGGGGCATCTCAAGCATCATGGTTACTGGTGACAACTGGTCTACAGCAACTGCGATTGCAAAGGAGGTGGGTATTGACAAAGTCTTTGCCGAGACAGATCCAATTGGAAAAGCTGATAAGATTAAAGATTTGCAGATGCAAGGGATTATTGTGGCAATGGTAGGGGATGGAATCAACGACTCACCTGCCTTAGTTGCAGCGGATGTTGGTATGGCAATTGGGGCCGGAACAGATATTGCTATAGAAGCAGCTGACATAGTTCTCATAAAAAGCAATTTGGAAGATGTTGTTACAGCTGTAGATCTTTCAAGAAAGACCATGTTTCGTATTCGGCTTAACTACATTTGGGCCCTCGGCTATAATATTCTTGGTATGCCAATTGCTGCTGGAATCTTATATCCCTTCACTGGGATAAGGTTGCCACCATGGTTAGCTGGTGCTTGCATGGCTGCTTCATCCCTAAGTGTAGTTTGTTCTTCTCTATTGTTGCAATCATACAAGAAGCCTCTGCATATTAAATCTACCTGA 2706 42.31 MFRFCGRRILEANEDDLKVPLNGSILNNVDKPKEINNDFQEQDIAVCRLRIKGMTCTTCAESVESALLMYEGVKKAAVGLALQEARVHFDSNLINAEQVAQAVEDAGFGAEIINSGNDVNIAHLKLQGISSPVHMTTIKSLLEVAVGVDRVDMDLKGQTVAISYDPDFTGPRSLIQCIRESGQGPDTFDANLFAPSRRRDTEQLHEIQTYRNQFLLSCLFSAPVFLFAMVLPMLPPYGNWLGYKIHNMFTVGMLLRWILCTPVQFIVGRRFYVGSYYALRRKSANMEVLVALGTNAAYFYSVYTVMKSWASDGFEGQDFFETSSMLISFILLGKYLEVVARGKTSDALAKLADLAPDVAHLLKLDDDGNVILEMEIDTQLIQRNDIIKIVPGEKVPVDGIVMNGHSHVNESMITGEARPTFKKAGDKVIGGTVNENGCLLVKATHVGSDTALSQIVQLVEAAQLARAPVQKLADQISKFFVPAVVLAAFLTWLAWFVSGEMHIYPRHWIPKAMDGFELAFQFGISVLVVACPCALGLATPTAVMVASGKGASQGVLIKGGSALEKAHKVKTIVFDKTGTLTVGRPVVVSAVLFSSFSMEEFCNMTVATETNSEHPLAKAVVDHAKKLRQKFGCQNECLTEVKDFEVHPGAGVGGKVGDRSVFVGNKRLMHACNIPIGLEVEQYMSEHEQLARTCVLVAINGKIAGAFAVTDPVKPEAGIVISFLRSRGISSIMVTGDNWSTATAIAKEVGIDKVFAETDPIGKADKIKDLQMQGIIVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLIKSNLEDVVTAVDLSRKTMFRIRLNYIWALGYNILGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLQSYKKPLHIKST 901
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 47405113 47412564 - Bda006075.1 Bda02g00644 2939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00644 901 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 286 889 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda02g00644 901 CDD HMA 49 111 IPR006121 GO:0046872
Bda02g00644 901 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 326 857 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda02g00644 901 Pfam Heavy-metal-associated domain 49 108 IPR006121 GO:0046872
Bda02g00644 901 ProSitePatterns E1-E2 ATPases phosphorylation site. 575 581 IPR018303 -
Bda02g00644 901 Pfam haloacid dehalogenase-like hydrolase 569 794 - -
Bda02g00644 901 SUPERFAMILY Calcium ATPase, transduction domain A 374 459 IPR008250 -
Bda02g00644 901 SUPERFAMILY HMA, heavy metal-associated domain 42 116 IPR036163 GO:0046872
Bda02g00644 901 CDD P-type_ATPase_Cu-like 214 876 - -
Bda02g00644 901 Gene3D - 564 830 IPR023214 -
Bda02g00644 901 SUPERFAMILY HMA, heavy metal-associated domain 117 185 IPR036163 GO:0046872
Bda02g00644 901 ProSiteProfiles Heavy-metal-associated domain profile. 46 112 IPR006121 GO:0046872
Bda02g00644 901 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 36 898 - -
Bda02g00644 901 SFLD p-type atpase 555 832 IPR044492 -
Bda02g00644 901 SUPERFAMILY Calcium ATPase, transmembrane domain M 318 565 IPR023298 -
Bda02g00644 901 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Bda02g00644 901 PRINTS P-type cation-transporting ATPase superfamily signature 803 815 - -
Bda02g00644 901 PRINTS P-type cation-transporting ATPase superfamily signature 780 799 - -
Bda02g00644 901 PRINTS P-type cation-transporting ATPase superfamily signature 573 587 - -
Bda02g00644 901 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Bda02g00644 901 PRINTS P-type cation-transporting ATPase superfamily signature 409 423 - -
Bda02g00644 901 Gene3D - 584 713 IPR023299 GO:0000166
Bda02g00644 901 Gene3D - 40 118 - -
Bda02g00644 901 SUPERFAMILY HAD-like 571 886 IPR036412 -
Bda02g00644 901 Gene3D - 341 463 - -
Bda02g00644 901 SFLD Haloacid Dehalogenase 555 832 - -
Bda02g00644 901 ProSitePatterns Heavy-metal-associated domain. 51 80 IPR017969 GO:0046872
Bda02g00644 901 PANTHER ATP7, ISOFORM B 36 898 - -
Bda02g00644 901 PRINTS Copper-transporting ATPase 1 signature 101 121 - -
Bda02g00644 901 PRINTS Copper-transporting ATPase 1 signature 249 269 - -
Bda02g00644 901 PRINTS Copper-transporting ATPase 1 signature 46 71 - -
Bda02g00644 901 PRINTS Copper-transporting ATPase 1 signature 214 235 - -
Bda02g00644 901 PRINTS Copper-transporting ATPase 1 signature 72 95 - -
Bda02g00644 901 PRINTS Copper-transporting ATPase 1 signature 269 294 - -
Bda02g00644 901 ProSiteProfiles Heavy-metal-associated domain profile. 121 187 IPR006121 GO:0046872
Bda02g00644 901 Pfam E1-E2 ATPase 373 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00638 Bda-Chr2:47308779 Bda02g00644 Bda-Chr2:47405113 0 dispersed
Bda02g00644 Bda-Chr2:47405113 Bda09g00041 Bda-Chr9:615048 9.26E-16 dispersed
Bda02g00643 Bda-Chr2:47391153 Bda02g00644 Bda-Chr2:47405113 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00644 K17686 - csin:114270619 1350.5