Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00646 ATGGAATCGTCGCCGGCGATTTCACCGGACCTAGACTTGGACAATCTCAGAGTCCTCAAGGTTCTAGGCAAAGGAGCTATGGGCACGGTATTCCTCGTTCACGACTCGGAAACTGACCCCTCTGCCGGGTCTCCCTTCGCTCTCAAGGTCGTTGAGAAGGAAGCCTCCATCCACTCGAAGGGGAAGGTTGATGTTGAACGCAGGGCCCGATGGGAAATCCAGGTTCTCGGCCGATTTTCCGATCCGAAACCTCATCCTTTTCTTTCCTTTATTCTTGGCTCATTTGACTCCGACGAGCTCATTGGCTGGGCCATACCCTACTGCTCTGGTGGCGATCTTAACGTGCTCCGATACCGACAAACAGACCACGTTTTTTCACCGTCTGTAATCCGGTTTTACTTGGCTGAGATCATCTGCGCTCTCGACCATCTACATAATATGGGTATCGTCTACCGCGATTTAAAGCCGGAAAACGTTTTGATACAGCAATCTGGCCACGTTACTCTCACAGACTTCGACCTTTCGCGTAATTTAGCTCCGATGTCCGTTAAAACCATAATTCAAGCCGATATTTTGCCGGAGATTCGGCAGAAAAACCGCCGTAAACTGACCCGTTGGCTGACTGCCGGTCCAGATAGGAAAAAAGGTTTGAAAAAGACGAAGTCTGCTCGGGTCAGCCCAGTGAGCCGAAGAAAACCGAGTTTTTGCAAAGGCGAGCGTTCCAACTCGTTCGTCGGCACAGAAGAGTACGTTTCTCCGGAGGTTGTTCGCGGTGACGGACACGAATTCTCCGTCGACTGGTGGGCGCTCGGAGTTTTGACGTACGAGATGCTTTACGGCAAGACACCGTTCAAGGGGAAGAATCGAAAAGAAACGTTTCGTAACATTCTCTTCAAAGCTCCAGAATTCATCGGGAAGCTCACAGACTTAACGGATTTGATCGAACGGCTGTTAGAGAAGGACCCCACCAAGCGTCTGGGCTACCTAAATGGCGCAAAAGAGATCAGAGACCACGTTTTCTTCAAAGGCGTGAAGTGGGACCTTTTAACAGACGTTTCCCGCCCGCCCTTTATTCCATCAAGGGACGAGAAAGATTTCCCGGCGAGCTCCCCGGCCGGATGTGTCACCGTAAAAGAGTATTATCAGAACTTAAAGATGCCGTCCTCGATTCCACCGTCACCGTCAGCATCACTCTCGATTGACTGTCAAAGAAGCGTCTCTTTGACGGAGTTCTGA 1236 50.73 MESSPAISPDLDLDNLRVLKVLGKGAMGTVFLVHDSETDPSAGSPFALKVVEKEASIHSKGKVDVERRARWEIQVLGRFSDPKPHPFLSFILGSFDSDELIGWAIPYCSGGDLNVLRYRQTDHVFSPSVIRFYLAEIICALDHLHNMGIVYRDLKPENVLIQQSGHVTLTDFDLSRNLAPMSVKTIIQADILPEIRQKNRRKLTRWLTAGPDRKKGLKKTKSARVSPVSRRKPSFCKGERSNSFVGTEEYVSPEVVRGDGHEFSVDWWALGVLTYEMLYGKTPFKGKNRKETFRNILFKAPEFIGKLTDLTDLIERLLEKDPTKRLGYLNGAKEIRDHVFFKGVKWDLLTDVSRPPFIPSRDEKDFPASSPAGCVTVKEYYQNLKMPSSIPPSPSASLSIDCQRSVSLTEF 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 47436941 47438176 + Bda006078.1 Bda02g00646 2941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00646 411 Gene3D Phosphorylase Kinase; domain 1 14 107 - -
Bda02g00646 411 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00646 411 PANTHER FLIPPASE KINASE 1-RELATED 11 388 - -
Bda02g00646 411 Gene3D Transferase(Phosphotransferase) domain 1 239 360 - -
Bda02g00646 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Bda02g00646 411 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00646 411 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Bda02g00646 411 SUPERFAMILY Protein kinase-like (PK-like) 13 396 IPR011009 -
Bda02g00646 411 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 388 - -
Bda02g00646 411 Pfam Protein kinase domain 18 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00646 411 Pfam Protein kinase domain 239 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00646 411 Gene3D Transferase(Phosphotransferase) domain 1 108 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00646 Bda-Chr2:47436941 Bda10g00634 Bda-Chr10:40377022 3.18E-95 dispersed
Bda02g00646 Bda-Chr2:47436941 Bda04g00641 Bda-Chr4:55169062 6.45E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69506 PF00069 Pkinase 1.90E-28 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00646 - K08286 jre:108998699 568.155