Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00714 ATGGGCGATAGTCGTAAATGGAGTCGTACTGATAAGCGGAGCTCTAAGAAGCAGAAAGTAATTCGGACGGCCGAAGAAGAGCTTGAGTCCAAACTAGGGTTTGATGTATTCTCCGAAGGCGAAAAAAGACTTGGATGGCTACTAACTTTCGCTTCCTCATCTTGGGAGGATCAGGACACCAAGAATGTCTATAGCTGTGTTGATTTATATTTTGTCACACAGGATGGCACCAGTTTTAAATCAAAATATAAATTCCGCCCGTATTTCTATGCAGCTACAAAGCATAAAATGGAAATGGATGTCGAAGCATATCTGAGGCGACGTTATGAAAGTCAAATTGCTGATATTGAAATTATAGAAAAAGAGGACCTTGATCTTAAAAACCATTTGTCTGGCTTGCGCAAGTTCTATCTAAAGCTATGTTTTGATACCATTCAAGATTTGATGAATGTGAAAAGTGAACTTATGCATGTCATTGAAAGAAATAGGGCAAAATCTGAAGCTGCAGAAGCATATGATTCAATTTTATCTGGAAAAAGAGAACAAAGACTTCAAGATTCTCTAGAATGTATTGTGGATCTTCGAGAGTATGATGTTCCTTACCATGTCCGTTTCGCTATTGATAATGATATACGATGTGGACAGTGGTATGATGTCAGCATATCCAGCTCTGGGGTTAAGCTTGAGAGAAGGACAGATCTTCTGCAACGCGCTGAAGTACACATATGTGCCTTTGATATTGAGACCACAAAACTTCCTTTGAAATTCCCAGATGCTGAATATGACAGCGTAATGATGATTTCATACATGGTTGATGGTCAAGGGTATCTGATCATCAACAGAGAGTGTGTTGGGGATGACATAGAGGATTTGGAATACACTCCAAAACCAGAATTTGAAGGGTTCTTTAAAGTGACGAATGTAAAAACCGAGGTAGAGCTTCTTAGACAGTGGTTCACCCATATGCAGGAGGTGAAGCCTGGCATCTACGTCACATATAATGGTGATTATTTTGATTGGCCATTCCTAGAAACCAGAGCCGCTTTTCATGGATTTAGAATGAGTGATGAATTAGGATTTCAATGTGACAAGAATCAGGGAGAATGCCGTGCAAAATTTGCTTGTCATTTGGATTGCTTTGCATGGGTAAAGCGGGATAGTTATCTTCCTCAAGGTAGCCAAGGCCTGAAGGCTGTTACTAAGGCAAAATTGGGATATGATCCCCTTGAGGTTAATCCTGAAGATATGATGATGGCCTCTTATTCCGTATCTGATGCTGTTGCCACATACTACTTGTATATGACCTACGTCCATCCTTTCATTTTTTCTCTAGCTACCATTATTCCAATGTCACCTGATGAGGTTTTGCGCAAGGGTAGTGGGACTCTATGTGAAATGCTTCTTATGGTTCAGGCTTACAAAGCAAATGTTATATGTCCTAACAAGCATCAGAATGATCCAGAGAAGTTCTATAACAATCGGCTCCTTGAGAGTGAAACATATATAGGAGGCCATGTGGAATGCCTTGAGAGTGGTGTTTTTAGATCTGACCTTCCTACCAGTTTTAGACTCGATCCAGAAGCTTATGATCTGCTGATAAAAAACTTGGATAGAGATCTGCATTATGCCATACGAGTAGAAGGTAAGATGGACTTAGAACTAGTGTCAAATTATGAAGAAGTGAAGACAGCTATTATGGAAAAGCTTGTGAGGTTACGGGACGACCCTATACATGAAGAATGCCCTCTTATATATCATCTTGATGTAGCTGCCATGTATCCAAATATTATTCTTACAAACAGGCTTCAGCCACCATCAATAGTTATAGATGAGGTTTGTACTGCTTGTGATTTCAACCGGCCTGGAAAAACTTGTCTGAGAAAACTTGAATGGGTTTGGCGTGGTGAGGTCTTCATGGCTAAAAAAAGCGATTATTATCACTTGAAGAAACAAATTGAGTCAGAGTTTGTTGATAATGGCGACAATAAATTTTCAAAATCTTTTCTTGACTTGCCTAAAATGGAGCAGCAAGTAAAGCTTAAAGAGCGTTTAAAGAAATATTGTCAAAAGGCTTATAAAAGAGTGCTTGACAAGCCAGTCACTGAACTTCGTGAAGCAGGGATCTGTATGAGAGAAAATTCCTTTTACGTTGACACTGTCCGCAGCTTTCGAGATAGGAGGTATGAATACAAAGGACTAAATAAGACTTGGAAGGGGAAGCTGTCTGAAGCCAAAGCTAGTGGAAATTCTATTAAGATCCAGGAAGCACAAGATATGGTAGTTCTATATGATTCGTTACAGCTAGCTCACAAATGTATACTTAACTCCTTCTATGGATATGTCATGCGGAAGGGAGCAAGATGGTACTCTATGGAAATGGCTGGGGTTGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCGTTTACTAATTGAAAAAATTGGAAAACCACTTGAACTTGACACAGATGGTATTTGGTGTGCACTCCCTGGATCTTTTCCTGAGAACTTTACTTTCAAAACAAAAGATCTGACGAAGAAGCTCACGATCTCATATCCATGTGTGATGCTTAATGTTGACGTGGCATTGAACAATACAAATGATCAATATCAGGTTCTCACAGACCCTGTCAGTAAAATATACTCAACTCATAGTGAATGCTCCATCGAGTTTGAAGTGGATGGACCATACAAGGCAATGATTCTTCCTGCTTCAAAGGAAGAGGGTATTTTGATTAAGAAGAGATATGCTGTGTTTAATGATGATGGGACCCTTGCTGAGCTGAAAGGTTTTGAGATCAAACGAAGAGGCGAGCTCAAGCTCATCAAAGTTTTTCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGGTCAACTTTGGAGGAATGCTATTCAGCTGTTGCAGCGGTTGCAAATCGATGGCTTGATCTTCTAGATAATCAAGGAAAAGACGTTGCTGATAGCGAGTTGCTTGATTACATATCAGAATCAAGTACAATGAGCAAGTCTTTGGCAGAATATGGTGAACAAAAATCATGCTCTGTGACGACTGCTCGACGTCTTGCTGATTTTCTCGGGGATACAATGGTCAAAGATAAAGGCCTACGTTGTGCATACATCGTTGCATGTGAACCAAAGGGAACACCTGTAAGTGAACGTGCTGTTCCTGTAGCTATTTTTGAGACTGATGCAGATATCATGAAGTTTTACATACGAAAATGGTGCAAGATTTCATCAGAAGTTGCCATTAGATTCATTATTGATTGGTCTTATTACAAGCAACGGCTCTCTTCAGCAATTCAAAAAATCGTAACAATTCCTGCTGCCATGCAAAAGGTACAGTTTGTTGTGGTCTATCTGAGTTGTCTGGTTTTTCATCTGATAATCAGTAAAATTTTCCAGGTTGCTAACCCTGTCCCTAGAGTAGTTCATCCTGATTGGCTGTATAAAAAGGTTCGTGAGAAGGAGGACAAATTTCGGCAACGGAAGCTTGTTGATATATTCAACACCTCGAGGAGGGATACCTTTTCCAAAAAGGATGGTGTTTCAACCTTCACCAATCATGTTATTAATGAAGAGAAGGCCGACGATATAGAAGATTTCCAAAAGAAAATAGACTCTGTAGATAGACCAAGACCCATAGTTCATTGCCATAAAAATAATGCCGTGAGAAATCCAGTCAATGGAAGTGTACAGATGGATTCCCTGGAGCAGAAGAGACATAAAGTGCATGAACCAACTTCACCAAGACATCTAAAAAATGTTGACAGAAAGTTAGATTACCAGGGGTGGCTTGAAACTGAGAAAGTCAGGTGGAAGAATACTTTGGACAGGAGGAAGAAGCAGAGATTGGCAAATTCAAGGATTCCACTTCATGCTGATGGGGTTGGTCGGGAGCTGGGGAATTCTATGAGTCAAAAAGAAGGTCAAGGAAGAAAAGGAGTTAGTTCATATTTTAAGAGGCATGATATAGCCTTAACAAATTGCTATTGGCAGGTTTTACAGCTCGTTCCTGGTTCAAAGAGTGGACAGTTTTTTGCATGGGTTGTTGTTGAAGGAGTCATGCTTAAAGTTTCCATTACTGTTCCTAGAATGTTTTACCTCAACTCCAAGGCTCCTATAGCAGAAACATTTGTAGCAAGGCCTGTTAACAAGATCCTTCCTCATGGAAGGCATAACAATAATCTCTATGAGGTTGTTATTGATGAAAGCCAATTTAAGACGCAAAGCCACAAGCTTGCAGCTCTTCTTGCGGATCCCAAAGTTGAGGGGATTTATGAAACCAAACTACCATTGGACTATAATTCCATCCTCCACCTTGGTTGTGTCTGTAAACCTGATAAAACTGCTAAGAAACAGACTTTTCAGGACGAGTGGAATCTGAATGAACTGCACATGAAGACTACAGCAGAATGCAATTATTTGGAAAAATCCATCTCTTTCTTCTACTTGTATAATAGCATCTCAGAGGGACGGGCTTTGTATATTATATACTTTCCTGCCTCAAGATCGATATATGTAGTGGTGGCTAATCCATATCAAAACAAGGATTTGTCACCAGCTTTTCTGGAAAAACAATTTCGTGAAGCTTGCCAAGTGTTCTCTATTCCACCTCCAGTCAATGGTACCATCTTCAAGGTTGACTATGTTGGACGCGTCAAAGATGCTGAAATATTAATGCAGCGAGCAATAACTGAGCACAGACATGAACATCATGGACCTACAATAGCTGTTATTGAGAGTCCAATTGCTCATCTGCTTAAGTCAGGCATACGAGCTCTAGATGACTTTCCTTGTGTGAACATTCCATCCAATGCTCGTGATAGCCAATATCAGGTTCTTGGTTGGCAACAAGTGGCTGCGAAAATTGGAATGCAACGTTGTTCTGCTTCATGCCAGTGGTTGAATGAACGGATTTCTCTCGCCAGATATGCTCATGTGCCATTGGGAAATTTTGAACTTGATTGGCTAATATTTACGGCAGATATCTTCTTTTCCAGAGCATTACGAGATAAGCAACAGGTACTTTGGATATCAAATGATGGGGTTCCAGATCTAGGGGGTATTAGTGAAGAAGATACGTGTTTTGTTGATGAGGTTCAGCAGCCTGTCCTGATATATCCTGGAGCATACAGAAAAGTTGTCCTGGAGCTTAAAATTCATCACCTAGCTGTTGATGCTCTTCTAAAAAGCAACCAAATAAATGAGTTGGAAGGAGGTGTTTTATTTGGATTTGAGCAGGACGTGAATTCAGGATCACAAAGTTTGCATGAACAAGGTGGATTTGATGAGGCTGCCTCATGTGCACCAGTATTCCGAGTTCTTAAACAGTTCGTGCAGAGATGCCTTGCTGATGCAGTAACATCTGGAAATGTGTATGCTGATGCAATACTCCAGCACCTATATAGATGGATTTGCAGTCCCCAGTCAAAACTTCATGACCCAGCTATTCATCGTACACTTCATAAGGTAATCATGCAAAAAGTTTTTGCTTTATTCTTGGCTGAGTTACGCAAATTGGGTGCTACTATCATTTTTGCCAACTTCTCAAGGGTAATCATAGACACAGGAAAGTTAGATCTCTCAGCTGCCAAAGCTTACTGTGACAGCGTGCTTAAAACATTGCAAACTAGAGATCTATTTGAATGGATTGAACTGGAACCAGTGCAATTTTGGCATTCGTTGTTGTTTATGGATCAGTACAATTATGGAGGAATCCCCGCAAAAGATAATGAAACCGTTCAGGATGAATCACAAGTGGATATTGTATCTAGCTGGAATATTGCTGAATACTTACCAAAGAAAATTCAGGATCATTTTGTTTTTATTATCTCTCAATTTTTATACATTCCCTGGAAATATTCTACAAAACAAGCTTCTATTAGAACATCTTTGCAGCATAGTGACTCATGCACGCCATCTATCACAGTTGTGGCTGCCGAATCCTTTGAGTCACATATGACGGATTATCTAAAGGGGCAGATTAGCTCCTACTTCACAGAAAAACTTCTTGAAATAGTTCGTGATATTGTTCGTCATATGAAGGGTATCAATAAAACAGATAGTGATCAACATAGTTTGCCTGGGATTCCACAACTTTCTGGTAGCAGCCACAAAGGGGATGCTGCTCTGGAGTTCATTAAGCATACCTGTGCTGTTTTGGCGCTAGATCAAACAGTTCAGCATGATGTTCTGGTGCTAAGAAAGAATTTGCTGAAATACGTTCATGTAAGGGAGTTTGCTCCAGAAGCTGAGTTTTTTTATCCCTGCTCGTCCTTCATCCTTTCAAATGTCATTTGCAGCTATTGCAACGACTGTCGGGATCTGGACCTGTGTCGCGACTCAGCTTTGCAGACGCAGGATTGGTGCTGTGCCGTGCCACAATGCGGCCAACCCTACAACCGGGAGGTGATGGAGAATGCTCTTCTTCAAATTGTAAGGCAGAGAGAGCGTGCATTTCACCTACAGGACCTTGTATGTATCAGGTGTAAGCAGGTCAAAGCTGCTCATTTAGCTGAGCAATGCGCTTGTGCTGGCTCATTTAAATGCAGGGAAGATGTGACAGATTTTCAAAGCAAGATGAAGATTTTCTTCGGCATTGCTGTTCGTCAGAAATTTCAACTTCTCCAAGAGTGTACTTCATGGATTTTAGAAGGTCGCTGA 6663 40.49 MGDSRKWSRTDKRSSKKQKVIRTAEEELESKLGFDVFSEGEKRLGWLLTFASSSWEDQDTKNVYSCVDLYFVTQDGTSFKSKYKFRPYFYAATKHKMEMDVEAYLRRRYESQIADIEIIEKEDLDLKNHLSGLRKFYLKLCFDTIQDLMNVKSELMHVIERNRAKSEAAEAYDSILSGKREQRLQDSLECIVDLREYDVPYHVRFAIDNDIRCGQWYDVSISSSGVKLERRTDLLQRAEVHICAFDIETTKLPLKFPDAEYDSVMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGFFKVTNVKTEVELLRQWFTHMQEVKPGIYVTYNGDYFDWPFLETRAAFHGFRMSDELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQNDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPEAYDLLIKNLDRDLHYAIRVEGKMDLELVSNYEEVKTAIMEKLVRLRDDPIHEECPLIYHLDVAAMYPNIILTNRLQPPSIVIDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDNGDNKFSKSFLDLPKMEQQVKLKERLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLTKKLTISYPCVMLNVDVALNNTNDQYQVLTDPVSKIYSTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDVADSELLDYISESSTMSKSLAEYGEQKSCSVTTARRLADFLGDTMVKDKGLRCAYIVACEPKGTPVSERAVPVAIFETDADIMKFYIRKWCKISSEVAIRFIIDWSYYKQRLSSAIQKIVTIPAAMQKVQFVVVYLSCLVFHLIISKIFQVANPVPRVVHPDWLYKKVREKEDKFRQRKLVDIFNTSRRDTFSKKDGVSTFTNHVINEEKADDIEDFQKKIDSVDRPRPIVHCHKNNAVRNPVNGSVQMDSLEQKRHKVHEPTSPRHLKNVDRKLDYQGWLETEKVRWKNTLDRRKKQRLANSRIPLHADGVGRELGNSMSQKEGQGRKGVSSYFKRHDIALTNCYWQVLQLVPGSKSGQFFAWVVVEGVMLKVSITVPRMFYLNSKAPIAETFVARPVNKILPHGRHNNNLYEVVIDESQFKTQSHKLAALLADPKVEGIYETKLPLDYNSILHLGCVCKPDKTAKKQTFQDEWNLNELHMKTTAECNYLEKSISFFYLYNSISEGRALYIIYFPASRSIYVVVANPYQNKDLSPAFLEKQFREACQVFSIPPPVNGTIFKVDYVGRVKDAEILMQRAITEHRHEHHGPTIAVIESPIAHLLKSGIRALDDFPCVNIPSNARDSQYQVLGWQQVAAKIGMQRCSASCQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALRDKQQVLWISNDGVPDLGGISEEDTCFVDEVQQPVLIYPGAYRKVVLELKIHHLAVDALLKSNQINELEGGVLFGFEQDVNSGSQSLHEQGGFDEAASCAPVFRVLKQFVQRCLADAVTSGNVYADAILQHLYRWICSPQSKLHDPAIHRTLHKVIMQKVFALFLAELRKLGATIIFANFSRVIIDTGKLDLSAAKAYCDSVLKTLQTRDLFEWIELEPVQFWHSLLFMDQYNYGGIPAKDNETVQDESQVDIVSSWNIAEYLPKKIQDHFVFIISQFLYIPWKYSTKQASIRTSLQHSDSCTPSITVVAAESFESHMTDYLKGQISSYFTEKLLEIVRDIVRHMKGINKTDSDQHSLPGIPQLSGSSHKGDAALEFIKHTCAVLALDQTVQHDVLVLRKNLLKYVHVREFAPEAEFFYPCSSFILSNVICSYCNDCRDLDLCRDSALQTQDWCCAVPQCGQPYNREVMENALLQIVRQRERAFHLQDLVCIRCKQVKAAHLAEQCACAGSFKCREDVTDFQSKMKIFFGIAVRQKFQLLQECTSWILEGR 2220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 47962866 47999935 - Bda006152.1 Bda02g00714 3009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00714 2220 Gene3D DNA Polymerase, chain B, domain 1 55 231 - -
Bda02g00714 2220 Gene3D - 237 458 IPR036397 GO:0003676
Bda02g00714 2220 MobiDBLite consensus disorder prediction 1 20 - -
Bda02g00714 2220 CDD POLBc_epsilon 493 1112 - -
Bda02g00714 2220 SUPERFAMILY DNA/RNA polymerases 459 1105 IPR043502 -
Bda02g00714 2220 Pfam DNA polymerase family B 749 1055 IPR006134 GO:0000166|GO:0003677
Bda02g00714 2220 Pfam DNA polymerase family B, exonuclease domain 73 399 IPR006133 -
Bda02g00714 2220 Pfam Domain of unknown function (DUF1744) 1542 1906 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bda02g00714 2220 SUPERFAMILY Ribonuclease H-like 65 480 IPR012337 -
Bda02g00714 2220 Gene3D Palm domain of DNA polymerase 569 927 IPR023211 -
Bda02g00714 2220 CDD DNA_polB_epsilon_exo 239 434 - -
Bda02g00714 2220 SMART DUF1744_2 1522 1906 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bda02g00714 2220 SMART polmehr3 238 832 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bda02g00714 2220 Gene3D - 931 1116 IPR042087 -
Bda02g00714 2220 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1131 2217 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bda02g00714 2220 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 31 1114 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00714 K02324 - qsu:111996722 3640.51