Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00754 | ATGGCTGGAAGAGCTACTCCGACTACAACTACGTACTCTCCTTCTCCCACAACCCAAAAGACTAGGCATTCCTTCTACAATCAAAGTAACTCAACGCCGAATTTTGTAGTTTTCAAGACTGGCGCTGTAAATGCTGCATCAGGATCTGCTTATGCAGAGTTTGGAAATACCAAAGTCATTGTATCTGTATTTGGTCCAAGAGAAAGTAAGAAAGCAATGATGTACAGCGACATAGGTCGGCTTAATTGCAGTGTCAGCTATACAACATTTGCTACCCCTGTTCGAGGGCAGGGATCAGAACACAAAGAATTCTCCTCAATGCTTCATAAGTCTCTGGAGGGTGTAATAATACTGGAAACTTTCCCTAAGACAACCGTTGATGTATTTGCATTGGTTTTGGAGTCTGGTGGGAGTGATCTACCAGTGATTATATCATGCGCTAGTCTTGCCCTAGCCGATGCGGGGATTATGGTTTATGACCTTGTTCCCTCAGTATCCGTGTCTTGTTTTGGTAAGAATCTCGTTATTGATCCAATCTCGGAAGAAGAAAACTGCCAAGATGGAAGTCTAATGATAACTCTCATGCCATCTCGGTACGAGGTCACTCAACTCACAGTGACGGGGGAATGGTCGGCGCCTAAAATTGATGAGGCAATGCAGCTCTGCCTGGATGCTTGCTCAAAGCTTGCAACGATCATGAGAGTGCGTCTGAGAGAAGCTGTCGATCTCCATCGGAATAGAAAGTATATGCAGTCGCCATCTGGTTCAGAATTTTGTAGCTTCATCATGGGTTATCAAAATTCAAAACCTATAAGGTTTAGTTTCTTAATCTCAGTCATAATTGTGTTTAATTTGATCATTTCCATCTTTGAATTTGAAATGTTTCCTTCAGATTTCAAGAAGACTTCCAATTTTCAGGCCAGCTTAAACAGGAACATAGATGGCCTTCAATTGCCAGAGTCAATCGCCAAGAAAGCTAGAAAATCCTTGAAGGCTAAGGTTTTATCGAGAGTATTCTCTGAAGACTATGAACTAGTGAGGCGAAAAATATTGGACCCTCGAGGCCGAAATTTACGCAGATGGAACAAGATTTTCTTAGTGGCTTGTTTGGTTTCTCTGTTTGTAGACCCTTTATTCTTCTACTTGCCAGTTGTGTGGGATAAAATGTGCATTGAGATTGCAGTTAGTCTCGAAGTCGTTCTCACGGCGATAAGATCCATTGCCGATATCTTCTACATAATCCAGATTTTGATTAAGTTTCGAACGGCTTTTATCGCTCCTTATTCTCGTGTATTTGGGAGGGGAGAGCTCGTAATAGACCCTTCGAAAATCGCCTCGAGATATTTAGTTCATGGTTTCTGGATTGATCTTATGGCTGCTCTGCCTCTTCCTCAGGTTTTAGGAGCTTGTTGGTATCTATTATCGATCGAGCGAGAAGAAACGTATCTTCAATCTACAACAGTCCGATTAGAAGAGTGGAGGATAAAGAGAAGAGATACTGAACAATGGATGCATCACAGACAGCTTCCCCCGGAGCTGAGACAGTCGGTGAGAAAATATGATCAGTATAAATGGGTTGCGACTCGAGGAGTAGATGAAGAAGCTCTGCTTAAAGGCCTTCCGATGGATCTCCGACGAGACATTAAACGCCATCTCTGCCTCGACCTTGTTCGCAGAGTTCCTTTGTTCGATCAAATGGACGAGAGAACTCTGGATGCAATCTGCGAGAGGCTGAAGCCGGCGTTGACGTTTTTGGTTCGAGAAGGCGACCCAGTTAATGCAATGCTGTTTATAATCAGAGGAAACCTTGATTCCTACACCACTAATGGCGGACGAACTGGGTTTTTCAATTCATGCAGAATAGGCCCAGGGGATTTCTGCGGCGAAGAGTTGCTCACGTGGGCGCTGGACCCTCGGCCAGGCGTTGCCCTCCCTAGCTCCACTCGCACTGTGGAAGCCATCTCAGAATTCCGATTCTACTCGCATCAATGGCGGACGTGGGCGGCTTGTTTTGTGCAGGCCGCTTGGAGGCGTTACAAGAAACGCAAGGAAGCGGCGGAGCTGAGGGCTAGAGAGAGTCAACCGGAGGTGTACTCGCCTGAATTGCAGATTCCTGCTTCAGCCATTAGAAACGGCGGGAAGAACAGACCTGGGTCTGCGATTGTGACGTCGTTGCAGAAGCCGGAAGAACCAGATTTCTCTGTGGTCGATGAATGA | 2217 | 45.47 | MAGRATPTTTTYSPSPTTQKTRHSFYNQSNSTPNFVVFKTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFATPVRGQGSEHKEFSSMLHKSLEGVIILETFPKTTVDVFALVLESGGSDLPVIISCASLALADAGIMVYDLVPSVSVSCFGKNLVIDPISEEENCQDGSLMITLMPSRYEVTQLTVTGEWSAPKIDEAMQLCLDACSKLATIMRVRLREAVDLHRNRKYMQSPSGSEFCSFIMGYQNSKPIRFSFLISVIIVFNLIISIFEFEMFPSDFKKTSNFQASLNRNIDGLQLPESIAKKARKSLKAKVLSRVFSEDYELVRRKILDPRGRNLRRWNKIFLVACLVSLFVDPLFFYLPVVWDKMCIEIAVSLEVVLTAIRSIADIFYIIQILIKFRTAFIAPYSRVFGRGELVIDPSKIASRYLVHGFWIDLMAALPLPQVLGACWYLLSIEREETYLQSTTVRLEEWRIKRRDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCLDLVRRVPLFDQMDERTLDAICERLKPALTFLVREGDPVNAMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVALPSSTRTVEAISEFRFYSHQWRTWAACFVQAAWRRYKKRKEAAELRARESQPEVYSPELQIPASAIRNGGKNRPGSAIVTSLQKPEEPDFSVVDE | 738 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 48285764 | 48292146 | + | Bda006192.1 | Bda02g00754 | 3049 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00754 | 738 | Gene3D | Jelly Rolls | 560 | 671 | IPR014710 | - | |
Bda02g00754 | 738 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 36 | 156 | IPR020568 | - | |
Bda02g00754 | 738 | MobiDBLite | consensus disorder prediction | 707 | 738 | - | - | |
Bda02g00754 | 738 | Pfam | 3' exoribonuclease family, domain 1 | 38 | 156 | IPR001247 | - | |
Bda02g00754 | 738 | CDD | RNase_PH_MTR3 | 39 | 239 | - | - | |
Bda02g00754 | 738 | Pfam | 3' exoribonuclease family, domain 2 | 161 | 221 | IPR015847 | - | |
Bda02g00754 | 738 | ProSiteProfiles | IQ motif profile. | 665 | 694 | IPR000048 | GO:0005515 | |
Bda02g00754 | 738 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 467 | 656 | - | - | |
Bda02g00754 | 738 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 320 | 467 | - | - | |
Bda02g00754 | 738 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 656 | 737 | - | - | |
Bda02g00754 | 738 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 554 | 659 | IPR000595 | - | |
Bda02g00754 | 738 | PANTHER | - | 467 | 656 | - | - | |
Bda02g00754 | 738 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda02g00754 | 738 | CDD | CAP_ED | 562 | 656 | IPR000595 | - | |
Bda02g00754 | 738 | SUPERFAMILY | cAMP-binding domain-like | 492 | 632 | IPR018490 | - | |
Bda02g00754 | 738 | SUPERFAMILY | Ribonuclease PH domain 2-like | 159 | 240 | IPR036345 | - | |
Bda02g00754 | 738 | SMART | cnmp_10 | 562 | 686 | IPR000595 | - | |
Bda02g00754 | 738 | Gene3D | Helix hairpin bin | 489 | 553 | - | - | |
Bda02g00754 | 738 | Pfam | Ion transport protein | 360 | 469 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Bda02g00754 | 738 | Gene3D | - | 36 | 246 | IPR027408 | - | |
Bda02g00754 | 738 | SUPERFAMILY | Voltage-gated potassium channels | 352 | 469 | - | - | |
Bda02g00754 | 738 | PANTHER | - | 656 | 737 | - | - | |
Bda02g00754 | 738 | PANTHER | - | 320 | 467 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00754 | Bda-Chr2:48285764 | Bda12g00522 | Bda-Chr12:7998729 | 3.49E-36 | dispersed | |
Bda07g01104 | Bda-Chr7:12926171 | Bda02g00754 | Bda-Chr2:48285764 | 4.56E-24 | dispersed | |
Bda13g00772 | Bda-Chr13:9245920 | Bda02g00754 | Bda-Chr2:48285764 | 5.34E-06 | dispersed | |
Bda02g00754 | Bda-Chr2:48285764 | Bda15g00779 | Bda-Chr15:11637413 | 1.44E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00754 | K05391 | - | cit:102621236 | 431.409 |