Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00760 ATGGCGAAAGAAGTGGAAGTTGCAGAGCAGGGAGATTACGCGAGAAAAGACTACCAGGACCCTCCTCCGGCGCCACTGATAGATATGGAGGAGCTTACTCTTTGGTCATTTTACAGAGCTCTGATCGCGGAGTTCATCGCGACGCTTCTGTTCCTCTACGTCACGATTTTGACTGTGATCGGATATAAGAGCTCCACTGTGCCAACTAATAACCCCTGCGATGGAGTTGGTGTTCTCGGTATTGCCTGGGCCTTCGGAGGAATGATTTTTGTCCTTGTCTACTGCACTGCCGGAATCTCTGGAGGGCACATAAACCCGGCTGTTACACTTGGGCTGTTTCTGGCGAGGAAGGTGTCGCTGGTGAGGGCCTTAATGTATATGGTCGCGCAGTGTTTGGGCGCGATCTGCGGGTGTGGATTGGTGAAAGCCTTCCAAAAGTCATATTACGACAGGTATGGAGGTGGCGCCAACGAGCTACAGCCCGGCTACAGCGTAGGCACTGGATTGGGCGCAGAGATCATCGGTACTTTCGTTCTCGTCTATACCGTCTTCTCAGCCACTGATCCTAAGCGAAGTGCTCGAGACTCCCATGTTCCTGTTTTGGCTCCTCTGCCAATTGGGTTTGCTGTTTTCATGGTTCACTTGGCCACCATTCCAGTGACTGGAACTGGTATCAACCCAGCCAGAAGTTTAGGAGCTGCTGTTATCTACAACGAGAAGGAAGCCTGGGATGATCAATGGATTTTTTGGGTTGGTCCTTTTGTTGGAGCTGCCATTGCTGCTTTCTACCACCAGTATATTCTCAGAGCGGCCGCCATTAAAGCTCTTGGATCTTTCAGGAGCAATGCTTGA 852 51.06 MAKEVEVAEQGDYARKDYQDPPPAPLIDMEELTLWSFYRALIAEFIATLLFLYVTILTVIGYKSSTVPTNNPCDGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKVSLVRALMYMVAQCLGAICGCGLVKAFQKSYYDRYGGGANELQPGYSVGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNEKEAWDDQWIFWVGPFVGAAIAAFYHQYILRAAAIKALGSFRSNA 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48365973 48367085 + Bda006198.1 Bda02g00760 3055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00760 283 CDD MIP 39 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 PANTHER AQUAPORIN PIP2-4-RELATED 1 283 - -
Bda02g00760 283 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Bda02g00760 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 283 IPR034294 -
Bda02g00760 283 Pfam Major intrinsic protein 32 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda02g00760 283 Gene3D Glycerol uptake facilitator protein. 24 283 IPR023271 -
Bda02g00760 283 SUPERFAMILY Aquaporin-like 29 269 IPR023271 -
Bda02g00760 283 TIGRFAM MIP: MIP family channel proteins 43 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00760 Bda09g01459 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00760 Bda-Chr2:48365973 Bda15g01030 Bda-Chr15:19294203 1.40E-151 dispersed
Bda14g00620 Bda-Chr14:4659157 Bda02g00760 Bda-Chr2:48365973 2.60E-121 dispersed
Bda01g00291 Bda-Chr1:27748217 Bda02g00760 Bda-Chr2:48365973 9.63E-125 wgd
Bda15g00387 Bda-Chr15:6795935 Bda02g00760 Bda-Chr2:48365973 3.83E-178 wgd
Bda02g00760 Bda-Chr2:48365973 Bda03g00743 Bda-Chr3:6309940 8.66E-166 wgd
Bda02g00760 Bda-Chr2:48365973 Bda09g01459 Bda-Chr9:46436180 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00760 K09872 - pvy:116105008 505.753