Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda02g00767 | ATGAGCGTGATCGACATTCTATTCCGGGTCGACGCCATATGCAAGAGGTACGACAAGTACGATATTGAAAAACAGCGGGACCTCAATGCCTATGGCGATGACGCCTTTGCTAGACTCTACGCCGTCGTTGAAGCCGACATTGAATCAATTCTTCGGAAGTCGGCGATGGCTGCAGCTGATCAGAACAGGGCATCTGCGGCGGCGCTGAACGCAGAGATACGGTCGAAAAAGGCCCGATTGATGGATGAAGTTGTAAAGTTGAAGAAATTGAACCAGAAGAAGGTTAAGGGCCTGTCGAAAGAAGAACAGGCCATTCGTGAGGATTTGGTTCTTGCATTACCAGATAGAATCCAAGCAATCCGAGATGGAACGACCAATGCAGCCAAAATCTCTGGAGGATGGGCTTCTTCAACATCCCATAAAAATATCAAATTTGACTCCTCAGGTAAAGATCATTTTTTTTCTATGGATTCGGTTTTCTTAATCAATAGCTGTAGTCGATTAATTCGATCCGAAATAGGTGAATGTTTTGAGAGTGAATATTTCGAGCAATCCGAAGAAGCAAACCGGTTTAGGCAAGAGTATGAACTACGGAAAATGAAACAGGCATGTCTAGGCGTTATATCCGAAGGATTGGACACTTTGAAAAATCTGGCCCTTGATATGAACGAGGAAATGGATCGACAAGTTCCGTTGATTGATGAGATCGATACAAAGGTGGACAAAGTGACTTCTGATCTGAGAAATACGAATGTTAGGCTCAAGGAAAATCTCTTCAAGATGAGATCCAGCCGAAACTTCTGCATCGACATTATCCTGCTGTGTGTAATTCTGGGAATAGTTTCATACTTATACAAGTAA | 861 | 43.32 | MSVIDILFRVDAICKRYDKYDIEKQRDLNAYGDDAFARLYAVVEADIESILRKSAMAAADQNRASAAALNAEIRSKKARLMDEVVKLKKLNQKKVKGLSKEEQAIREDLVLALPDRIQAIRDGTTNAAKISGGWASSTSHKNIKFDSSGKDHFFSMDSVFLINSCSRLIRSEIGECFESEYFEQSEEANRFRQEYELRKMKQACLGVISEGLDTLKNLALDMNEEMDRQVPLIDEIDTKVDKVTSDLRNTNVRLKENLFKMRSSRNFCIDIILLCVILGIVSYLYK | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 48420942 | 48422360 | - | Bda006205.1 | Bda02g00767 | 3062 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda02g00767 | 286 | PANTHER | SYNTAXIN-73 | 1 | 153 | - | - | |
| Bda02g00767 | 286 | CDD | SNARE_Qc | 205 | 256 | - | - | |
| Bda02g00767 | 286 | Pfam | SNARE domain | 232 | 282 | IPR000727 | - | |
| Bda02g00767 | 286 | PANTHER | SYNTAXIN-73 | 170 | 285 | - | - | |
| Bda02g00767 | 286 | Coils | Coil | 70 | 90 | - | - | |
| Bda02g00767 | 286 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 195 | 257 | IPR000727 | - | |
| Bda02g00767 | 286 | SUPERFAMILY | SNARE fusion complex | 203 | 255 | - | - | |
| Bda02g00767 | 286 | PANTHER | SYNTAXIN | 170 | 285 | IPR045242 | - | |
| Bda02g00767 | 286 | PANTHER | SYNTAXIN | 1 | 153 | IPR045242 | - | |
| Bda02g00767 | 286 | Gene3D | - | 203 | 256 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda02g00767 | Bda-Chr2:48420942 | Bda08g00006 | Bda-Chr8:91241 | 1.33E-39 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda02g00767 | K08506 | - | vvi:100258712 | 348.206 |