Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00770 ATGTTGATGGAAATTGATCTGAACCATGCAGTGATTGAGACGGAGAAGAACGCATTTTGCAATGGGACTTGTGAAGAAGGTGGCTGTGTTTGTTGTTTGTCCTCCTCGACTTCTTCTTGCTCTTCAAATTCATCTTCTACTCCTGCTTCTTCCTCTACTTATTTGGAGCTTTGGTATGCTTGTGCTGGTCCTCTCACTTCGCTACCCAAAAAAGGGAATGTGGTTGTCTATTTCCCTCAGGGTCATCTTGAACAGGCTGCCTCAAACTCTCCTTTCCCCCCCATGGAAATGCCCTCTTTTGATCTTCCCTCTCAGATCTTCTGCAGGGTTGTAAACAACCAGCTCCTTGCAAATAAAGATAATGACGAGGTCTATACGCAAGTTACTTTGCTTCCTCAACCAGAGTTGGTTGGTGAGAATTTAGGTGGAAAAGAGCTTGAAGAATTGAACATAGAAGGAGATGAGGGAGGAGGGCCACCCATTAGAACTACTCCTCACATGTTCTGTAAAACACTGACAGCTTCTGATACTAGCACTCATGGAGGTTTTTCTGTTCCTCGTCGAGCAGCCGAAGACTGTTTCCCTCCTCTGGATTACAATCAGCAGAGACCCTCTCAAGAGATTGTTACCAAAGATCTGCATGGAGTGGAGTGGAAGTTTCGACATATTTACAGAGGTCAGCCTAGGAGGCACTTGCTCACTACGGGGTGGAGTTCGTTTGTGAGCCAAAAAAATCTTGTTTCGGGGGATGCAGTTCTCTTTTTAAGAGGGGAAAATGGAGAGCTAATGTTGGGAATCAGAAGAGCTGTCCGACCTCAAAGCGGTCTTCCTGACACACTTTTTGGGAGTCATAATACATATCATAATATTATGTCTACGTTGGCTAAAGCGATATCCACCAAGAGCGCATTCCACGTATTCTACAGTCCAAGGGCAAGTCATGCACAATTTGTCATACCTTACCAGAAATATGTGAAAAGCATCATTAATTCGGTGAACATCGGAGCAAGATTTAAAATGAAATTTGAAATGGATGATTCACCTGAAAGAAGGTATAGTGGTGTTGTTACTCATATTGCTGACGCTGATCCCTTTCGTTGGCCAAACTCAAAGTGGAGATGCTTGATGGTTAGGTGGGATGAAGATATCACCAGTGGTCATCAAGAGCGCGTTTCACCATGGGAGATCGATACTTTCGTTTCTCTCCCGCCTTTGAGCATTCAATCTTCGCCGAGGATGAAGAAGCTGCGGACAAGTCTGCATGCCGTACCCCCACCTCCCCCGACCACTGGAGGAGGTGGTATTTTGGACTTTGAGGATTCTTTTAGATCCTCTAAGGTCTTGCAAGGTCAAGAAAATGTTAGTTTTACATCATCATCCTTCGACGGACGAAATAGCATTACTGCAAATCGTTCACTCAAGTTTGAGAGACGCTCCCAATTGAATCAAATGCAAATTCCAGATAAGATGGGAGGCGGTACTATTGGTGACTTTTTGAAGATTCACTCTACTCCTTACACAGGCTTTAAGGATTATCGCTATTATCCGAGGGTCTTGCAAGGTCAAGAAATATGCCCGTTGAGGATGTTAACATCGAAAGCAGATTCTTTTAACATGTTTCAATCACACCAGCTTTTATCAGAAGGCTCTAAAAACATGTATATTCCTTATCCTGAAATTTATAAGAGCAACCGGATTGACGATTTCTTGAGAGAAAAAGTCTTGTTTAACCCTTCTGTGGAGGCTATGGCTATCCGAAATGAAGTTGAAAGGGCAAGTCGACCATATGAGCAGAAGAAGCAAATGGAAGTTGTTTCTACAAATCTCTCTTCTGGGTCACTTCTAAGAAATTCAAATGAAGACAATGCTAATGGAACTACAAATGGCTGTAAACTTTTCGGGTTTCCCTTGACTGGGGAAGCAACTACAAATTCACAAAGCTCCGGGAAGAGAAGTTGTACAAAGGTTCACAAGCAAGGCAGCTTGGTAGGAAGAGCCATTGATCTCTCCAAACTGAATAGCTATTATGACCTGCTCACTGAGCTTGAGCGGTTGTTTAGCATGGAAGGCCTCTTAAGAGATCCCGAGAAAGGATGGCGGATATTATACACTGACAGTGAAGATGATGTGATGGTCGTAGGAGACGATCCATGGCATGAATTCTGCAGTGAAGTGTCCAAGATCCATATCTACACTCAAGAAGAAGTGGAAAAGATGACTGTAGGAATCCCAAGTGATGATACTCAAAGCTCTTTAGATCAGGCTCCACCCAATATGGAAGCCTCCAAATCCTCATCGGTCGGATAG 2307 43.65 MLMEIDLNHAVIETEKNAFCNGTCEEGGCVCCLSSSTSSCSSNSSSTPASSSTYLELWYACAGPLTSLPKKGNVVVYFPQGHLEQAASNSPFPPMEMPSFDLPSQIFCRVVNNQLLANKDNDEVYTQVTLLPQPELVGENLGGKELEELNIEGDEGGGPPIRTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQEIVTKDLHGVEWKFRHIYRGQPRRHLLTTGWSSFVSQKNLVSGDAVLFLRGENGELMLGIRRAVRPQSGLPDTLFGSHNTYHNIMSTLAKAISTKSAFHVFYSPRASHAQFVIPYQKYVKSIINSVNIGARFKMKFEMDDSPERRYSGVVTHIADADPFRWPNSKWRCLMVRWDEDITSGHQERVSPWEIDTFVSLPPLSIQSSPRMKKLRTSLHAVPPPPPTTGGGGILDFEDSFRSSKVLQGQENVSFTSSSFDGRNSITANRSLKFERRSQLNQMQIPDKMGGGTIGDFLKIHSTPYTGFKDYRYYPRVLQGQEICPLRMLTSKADSFNMFQSHQLLSEGSKNMYIPYPEIYKSNRIDDFLREKVLFNPSVEAMAIRNEVERASRPYEQKKQMEVVSTNLSSGSLLRNSNEDNANGTTNGCKLFGFPLTGEATTNSQSSGKRSCTKVHKQGSLVGRAIDLSKLNSYYDLLTELERLFSMEGLLRDPEKGWRILYTDSEDDVMVVGDDPWHEFCSEVSKIHIYTQEEVEKMTVGIPSDDTQSSLDQAPPNMEASKSSSVG 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48437939 48445751 + Bda006208.1 Bda02g00770 3065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00770 768 ProSiteProfiles B3 DNA-binding domain profile. 168 270 IPR003340 GO:0003677
Bda02g00770 768 MobiDBLite consensus disorder prediction 743 768 - -
Bda02g00770 768 SUPERFAMILY CAD & PB1 domains 651 730 - -
Bda02g00770 768 Pfam B3 DNA binding domain 168 269 IPR003340 GO:0003677
Bda02g00770 768 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 33 763 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bda02g00770 768 CDD B3_DNA 166 268 IPR003340 GO:0003677
Bda02g00770 768 Pfam Auxin response factor 295 375 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bda02g00770 768 MobiDBLite consensus disorder prediction 742 768 - -
Bda02g00770 768 Gene3D - 647 740 - -
Bda02g00770 768 ProSiteProfiles PB1 domain profile. 651 733 IPR000270 GO:0005515
Bda02g00770 768 SUPERFAMILY DNA-binding pseudobarrel domain 164 278 IPR015300 -
Bda02g00770 768 SMART B3_2 168 270 IPR003340 GO:0003677
Bda02g00770 768 Gene3D - 166 270 IPR015300 -
Bda02g00770 768 PANTHER AUXIN RESPONSE FACTOR 33 763 - -
Bda02g00770 768 Gene3D - 331 403 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00770 Bda09g01469 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00757 Bda-Chr2:48348964 Bda02g00770 Bda-Chr2:48437939 4.97E-78 dispersed
Bda02g00770 Bda-Chr2:48437939 Bda11g01574 Bda-Chr11:48941667 5.42E-29 dispersed
Bda02g00507 Bda-Chr2:45982922 Bda02g00770 Bda-Chr2:48437939 2.91E-139 transposed
Bda03g00281 Bda-Chr3:2465183 Bda02g00770 Bda-Chr2:48437939 2.48E-19 transposed
Bda09g00878 Bda-Chr9:22884781 Bda02g00770 Bda-Chr2:48437939 1.60E-115 transposed
Bda09g01238 Bda-Chr9:43825008 Bda02g00770 Bda-Chr2:48437939 2.78E-129 transposed
Bda11g00093 Bda-Chr11:1081549 Bda02g00770 Bda-Chr2:48437939 1.38E-19 transposed
Bda11g00123 Bda-Chr11:1687260 Bda02g00770 Bda-Chr2:48437939 7.00E-36 transposed
Bda12g00280 Bda-Chr12:3024876 Bda02g00770 Bda-Chr2:48437939 4.79E-19 transposed
Bda02g00770 Bda-Chr2:48437939 Bda09g01469 Bda-Chr9:46511418 9.68E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15581 PF02362 B3 4.90E-23 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00770 - - qsu:112032972 1028.47