Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00774 ATGAACAAGAGGTCATTCAAGTATGCCTGGGTGTTGGACAAACTCAAGGCTGAGCGGGAGCGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACTGTCATCGATGCTCCTGGACATCGGGATTTTATCAAGAACATGATTACAGGCACCTCCCAAGCTGACTGTGCTGTGCTTATTATTGACTCCACCACCGGTGGTTTCGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAGCATGCTTTGCTTGCTTTCACTCTTGGTGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGATGCCACTACACCCAAGTACTCAAAGGCAAGGTATGATGAAATAGTGAAGGAAGTCTCATCTTATCTTAAAAAGGTGGGTTACAACCCGGAAAAGATTCCTTTTGTACCCATCTCTGGTTTTGAGGGAGACAACATGATTGAGAGGTCGACCAACCTCGACTGGTACAAGGGTCCTACCCTCCTGGACGCCCTTGACCTGATCTTGGAGCCGAAGAGGCCTTCAGACAAGCCTCTGCGTCTCCCTCTTCAGGATGTATACAAGATCGGTGGTATTGGAACTGTGCCCGTTGGACGTGTTGAGACTGGTGTTGTGAAGCCTGGAATGGTGGTGACTTTTGGCCCCACTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCATGAGGCTCTCCAGGAAGCTCTTCCAGGTGATAATGTGGGTTTCAACGTGAAGAACGTTGCTGTGAAGGATCTGAAGCGTGGTTTTGTTGCTTCCAACTCCAAGGATGATCCTGCCAGGGAAGCTGCCAACTTCACCTCTCAGGTGATCATCATGAACCATCCAGGCCAGATCGGCAACGGCTATGCACCAGTTCTTGATTGCCACACCTCCCACATTGCTGTGAAATTTGCCGAGATCTTGACCAAAATTGACAGACGATCTGGAAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAACGGTGACGCAGGAATGGTGAAGATGGTTCCGACCAAGCCCATGGTGGTGGAGACTTTCTCTGAGTACCCACCTCTTGGTCGTTTTGCTGTGAGAGACATGCGTCAGACTGTGGCCGTCGGAGTTATTAAGAGCGTGGAGAAGAAGGATCCATCTGGTGCCAAGGTCACCAAATCAGCAGCCAAGAAAGGTGGAAAATGA 1206 49.59 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLILEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48458204 48459512 - Bda006211.1 Bda02g00774 3069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00774 401 CDD EF1_alpha 1 179 - -
Bda02g00774 401 Pfam Elongation factor Tu GTP binding domain 9 176 IPR000795 GO:0003924|GO:0005525
Bda02g00774 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 201 IPR027417 -
Bda02g00774 401 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 182 IPR000795 GO:0003924|GO:0005525
Bda02g00774 401 Gene3D - 1 178 IPR027417 -
Bda02g00774 401 Pfam Elongation factor Tu C-terminal domain 274 381 IPR004160 -
Bda02g00774 401 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 278 381 IPR009001 -
Bda02g00774 401 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 3 385 IPR004539 GO:0003746|GO:0005525|GO:0006414
Bda02g00774 401 Gene3D Translation factors 275 382 - -
Bda02g00774 401 CDD EF1_alpha_II 182 272 - -
Bda02g00774 401 SUPERFAMILY Translation proteins 183 273 IPR009000 -
Bda02g00774 401 PANTHER TRANSLATION FACTOR 1 399 - -
Bda02g00774 401 PANTHER ELONGATION FACTOR 1-ALPHA 1 399 - -
Bda02g00774 401 CDD EF1_alpha_III 275 378 - -
Bda02g00774 401 Pfam Elongation factor Tu domain 2 200 265 IPR004161 GO:0005525
Bda02g00774 401 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Bda02g00774 401 PRINTS GTP-binding elongation factor signature 100 109 IPR000795 GO:0003924|GO:0005525
Bda02g00774 401 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Bda02g00774 401 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Bda02g00774 401 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 13 28 IPR031157 -
Bda02g00774 401 Gene3D Translation factors 181 268 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00774 Bda09g01471 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00774 Bda-Chr2:48458204 Bda11g00347 Bda-Chr11:3873899 0 dispersed
Bda02g00774 Bda-Chr2:48458204 Bda02g00775 Bda-Chr2:48461320 0 tandem
Bda14g00079 Bda-Chr14:613788 Bda02g00774 Bda-Chr2:48458204 1.60E-57 wgd
Bda15g00380 Bda-Chr15:6732927 Bda02g00774 Bda-Chr2:48458204 0 wgd
Bda02g00774 Bda-Chr2:48458204 Bda09g01471 Bda-Chr9:46517877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00774 K03231 - dct:110098184 790.03