Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00791 | ATGGAACATTCAGACAACTCGAACGCGAAGTCATCCTCCCACGTACCACCATTTTCGAGAGACTCCCGAGGTTCGCTTGAAGTTTTCAATCCTTCTACTTTCTCAGCCACATCCCGGCCGACGAACGCAGCCTTCCGGCCGAGCCCAACGTGGCAGAGCTGGGTCGAACCACGTGAAAGCTCGGAACCGGAAAATCTCAAGCTGTCATCCAAATCTAGTGGGACCAATGACGAGATCACCTCATGGATGGCTCTCAAAGACCCGACCACACATCAACAACCAGCATCACCATTAACTCACAAGACTATTGCTTCTATCATCAGCGACAAATCACCGGCGCCGGTTGCGAAACCAAGCGACGAAGTCGGCAACGCAGCTCAGCGAGCCGCCGAGTGGGGTCTGGTGCTGAAAACCGATACGGAGACCGGAAAGCCCCAAGGGGTAGCAGTGAGAACTTCCGGCGGAGATGAACCAAGCATCGGTAAAACGGAGAAACCGAGAAGAGATTCGAATAACTCAGTCAGAAGCTCCGGGGACATGTCGGATGACGGAGGTAGAGAACGAGGGTTTCTAAGAGTGTCGGATGATTTGAAGGATGCATTGTCAACCTTTCAGCAGACCTTCGTCGTCTCCGACGCGACGAAACCGGATTATCCAATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACACGTCCAGAGAGGTCATCGGAAGAAACTGTCGTTTCATGCAGGGTGCGGATACGGACCCGGAAGATGTGTCGAAGATTAGGGAGGCGCTGCAGGAGGGGACGAGTTACTGCGGGAGGCTACTGAATTATAAGAAAGACGGGACGCCTTTTTGGAATTTACTTACTATTGCGCCAATTAAGGATGAGGCTGGAAAAGTTCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAGGATAAGATGATGCGTCCCAATGGATTGCCTGAGTCCCTGATTAGATATGATGCTCGTCAAAAAGAGATGGCCAATAATTCAGTAACTGAGCTCGTTCAGGCCGTGAAGAGACCACGGTCTCTCAGCGAGTCGACAAATCAACGGCCTTTTAGAAAGTCAGGTGGAAGTGTGGAAGAGGACAAACCAGAACCTCCTGTGAGAAGGAAATCGGAGAGTGTTGCTCCGCCGGTACGAAACTCACAAGGCACTACTCGAAGATCGATGCAAAGTATAAGTGAATTGCCTGAGAAAAAACCAAGAAAATCCATCCGTCTTTCTTTCATGGGGAGATTCATACAGGTCGTTTTGCGTTCCTTGTTCCTCGCCGTACATAACTCAGTTCTGTTTCTGTTGCAGGATGATTCGGAAAAATCAACAGAACAAAGGCCTGACAGTTTGGATGACAAAGTTAGGCAGAGGCAAATGAGAAAGGGTCTTGATCTTGCTACAACCCTTGAACGAATTGAGAAGAACTTCGTCATTACTGATCCGAGGCTGCCTGATAATCCCATTATTTTTGCTTCTGATAGCTTCCTGGAGCTGACGGAGTACAGCCGAGAAGAAATCTTGGGCCGAAATTGCAGGTTCTTACAAGGGCCAGAGACTGATCCAGCGACTGTAAGGAAAATAAGAGAGGCCATTGACAATCACACTGAAGTTACTGTGCAGCTCATCAACTACACAAAGAGCGGGAAAAAATTCTGGAATCTATTTCATCTACAACCTATGCGTGACCAAAAGGGTGAAGTTCAGTACTTCATTGGAGTTCAATTAGATGGTAGTCAACACGTGGAGCCTCTTAAAAATTGTATTCCAGAGGATACAGCACAAGAGAGTGAAAAATTGGTGAGAGAAACCGCAGAAAATGTTGATGAGGCGGTCAGAGAACTTCCAGATGCCAACATGAAACCGGAAGATTTATGGATGAATCACTCCAAAGTTGTTCATCAAAAACCTCACCGGAGAGGAACTCCATCTTGGAAAGCTATACAGAAGATTCTAGATAGTGGTGAGGAGATAGGCTTGAAACATTTTAGGCCAGTTAAGCCTTTAGGATCTGGCGATACCGGCAGTGTGCATCTGGTGGAATTGTACGGTACTGGTCAGCTCTTTGCTATGAAGGCCATGGATAAGGGTGTTATGCTTAATCGAAACAAAGTGCATAGAGCTTGTGCAGAGAGAGAAATTCTCGACCTATTGGACCATCCGTTTCTTCCTGCTTTATATGCTTCTTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCCGGCGGAGAACTTTTCATGCTTCTGGACCGACAACCGGCAAAGGTTATAAAGGAAGATGCCGTCAGATTTTACGCTGCAGAAGTTGTTATTGCCTTGGAGTATCTCCACTGTATAATCTACAGGGACTTGAAGCCTGAAAATGTTCTACTCCAGGGTAATGGCCACGTCTCCTTGACGGATTTCGATTTGTCCTGTTTGACTTCCTGCAAACCTCAGCTTTTGATGCCTGCTCCAAATTTGAAGAAAAAGCATAAGAAAACTCAACAACCCCCTATCTTCATGGCCGAACCGATGAGAGCGTCTAATTCTTTCGTTGGCACGGAGGAATACATCGCTCCTGAAATCATAACTGGGGCAGGCCATACCAGTGCTGTGGACTGGTGGGCATTGGGTATTCTTCTATATGAGATGCTGTACGGATATACGCCATTTAGGGGTAAGACGAGGCAGAAAACGTTTGCCAACATTCTGCAGAAGGATATAAAATTTCCCAGAAGCATACAAGTTAGTCTCAGTTGCAAGCAGTTAATGTACAGATTATTACACAGGGATCCGAAAAATCGATTGGGTTCGAGGGAAGGAGCGAATGAAATAAAGTGTCACCCTTTCTTCCGCGATATAAATTGGGCACTCATTCGATCCATGAATCCTCCCGAGCTCGAGGCTCCGCATTTTGACTCAAAAGAAGCCGACAAGAATGTTAAAGACATTGATCCCGCGCTAGATGATCTACAAGTCAATGTTTTCTGA | 3018 | 46.59 | MEHSDNSNAKSSSHVPPFSRDSRGSLEVFNPSTFSATSRPTNAAFRPSPTWQSWVEPRESSEPENLKLSSKSSGTNDEITSWMALKDPTTHQQPASPLTHKTIASIISDKSPAPVAKPSDEVGNAAQRAAEWGLVLKTDTETGKPQGVAVRTSGGDEPSIGKTEKPRRDSNNSVRSSGDMSDDGGRERGFLRVSDDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSREVIGRNCRFMQGADTDPEDVSKIREALQEGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEAGKVLKFIGMQVEVSKHTEGYKDKMMRPNGLPESLIRYDARQKEMANNSVTELVQAVKRPRSLSESTNQRPFRKSGGSVEEDKPEPPVRRKSESVAPPVRNSQGTTRRSMQSISELPEKKPRKSIRLSFMGRFIQVVLRSLFLAVHNSVLFLLQDDSEKSTEQRPDSLDDKVRQRQMRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNHTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPEDTAQESEKLVRETAENVDEAVRELPDANMKPEDLWMNHSKVVHQKPHRRGTPSWKAIQKILDSGEEIGLKHFRPVKPLGSGDTGSVHLVELYGTGQLFAMKAMDKGVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPAKVIKEDAVRFYAAEVVIALEYLHCIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLMPAPNLKKKHKKTQQPPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILQKDIKFPRSIQVSLSCKQLMYRLLHRDPKNRLGSREGANEIKCHPFFRDINWALIRSMNPPELEAPHFDSKEADKNVKDIDPALDDLQVNVF | 1005 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 48624228 | 48631594 | + | Bda006230.1 | Bda02g00791 | 3086 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00791 | 1005 | SMART | serkin_6 | 675 | 960 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 136 | 189 | - | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 66 | 106 | - | - | |
Bda02g00791 | 1005 | Pfam | Protein kinase domain | 678 | 960 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00791 | 1005 | SUPERFAMILY | Protein kinase-like (PK-like) | 657 | 983 | IPR011009 | - | |
Bda02g00791 | 1005 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 490 | 589 | IPR035965 | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 370 | 385 | - | - | |
Bda02g00791 | 1005 | Gene3D | PAS domain | 462 | 627 | - | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 391 | 407 | - | - | |
Bda02g00791 | 1005 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 794 | 806 | IPR008271 | GO:0004672|GO:0006468 | |
Bda02g00791 | 1005 | Gene3D | PAS domain | 207 | 364 | - | - | |
Bda02g00791 | 1005 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 214 | 306 | IPR035965 | - | |
Bda02g00791 | 1005 | CDD | PAS | 220 | 309 | IPR000014 | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 8 | 59 | - | - | |
Bda02g00791 | 1005 | ProSiteProfiles | PAS repeat profile. | 193 | 265 | IPR000014 | - | |
Bda02g00791 | 1005 | ProSiteProfiles | PAC domain profile. | 267 | 321 | IPR000700 | - | |
Bda02g00791 | 1005 | TIGRFAM | sensory_box: PAS domain S-box protein | 220 | 313 | IPR000014 | - | |
Bda02g00791 | 1005 | TIGRFAM | sensory_box: PAS domain S-box protein | 499 | 589 | IPR000014 | - | |
Bda02g00791 | 1005 | Gene3D | Transferase(Phosphotransferase) domain 1 | 759 | 980 | - | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 158 | 172 | - | - | |
Bda02g00791 | 1005 | Gene3D | Phosphorylase Kinase; domain 1 | 674 | 989 | - | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 351 | 369 | - | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 351 | 415 | - | - | |
Bda02g00791 | 1005 | SMART | pac_2 | 270 | 312 | IPR001610 | - | |
Bda02g00791 | 1005 | SMART | pac_2 | 551 | 593 | IPR001610 | - | |
Bda02g00791 | 1005 | MobiDBLite | consensus disorder prediction | 1 | 106 | - | - | |
Bda02g00791 | 1005 | ProSiteProfiles | Protein kinase domain profile. | 675 | 960 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00791 | 1005 | ProSiteProfiles | PAC domain profile. | 548 | 602 | IPR000700 | - | |
Bda02g00791 | 1005 | Pfam | PAS domain | 497 | 589 | IPR000014 | - | |
Bda02g00791 | 1005 | Pfam | PAS domain | 214 | 310 | IPR000014 | - | |
Bda02g00791 | 1005 | ProSiteProfiles | PAS repeat profile. | 474 | 547 | IPR000014 | - | |
Bda02g00791 | 1005 | CDD | PAS | 489 | 589 | IPR000014 | - | |
Bda02g00791 | 1005 | Coils | Coil | 606 | 626 | - | - | |
Bda02g00791 | 1005 | PANTHER | FLIPPASE KINASE 1-RELATED | 141 | 1005 | - | - | |
Bda02g00791 | 1005 | CDD | STKc_phototropin_like | 673 | 980 | - | - | |
Bda02g00791 | 1005 | ProSitePatterns | Protein kinases ATP-binding region signature. | 681 | 704 | IPR017441 | GO:0005524 | |
Bda02g00791 | 1005 | SMART | pas_2 | 195 | 265 | IPR000014 | - | |
Bda02g00791 | 1005 | SMART | pas_2 | 476 | 545 | IPR000014 | - | |
Bda02g00791 | 1005 | PANTHER | PHOTOTROPIN-1 | 141 | 1005 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00791 | Bda-Chr2:48624228 | Bda06g00455 | Bda-Chr6:6582510 | 1.59E-27 | dispersed | |
Bda15g00404 | Bda-Chr15:6952390 | Bda02g00791 | Bda-Chr2:48624228 | 3.27E-51 | dispersed | |
Bda02g00791 | Bda-Chr2:48624228 | Bda09g01486 | Bda-Chr9:46684330 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69513 | PF00069 | Pkinase | 5.50E-60 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00791 | K20715 | - | jre:108989640 | 1560.81 |