Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00791 ATGGAACATTCAGACAACTCGAACGCGAAGTCATCCTCCCACGTACCACCATTTTCGAGAGACTCCCGAGGTTCGCTTGAAGTTTTCAATCCTTCTACTTTCTCAGCCACATCCCGGCCGACGAACGCAGCCTTCCGGCCGAGCCCAACGTGGCAGAGCTGGGTCGAACCACGTGAAAGCTCGGAACCGGAAAATCTCAAGCTGTCATCCAAATCTAGTGGGACCAATGACGAGATCACCTCATGGATGGCTCTCAAAGACCCGACCACACATCAACAACCAGCATCACCATTAACTCACAAGACTATTGCTTCTATCATCAGCGACAAATCACCGGCGCCGGTTGCGAAACCAAGCGACGAAGTCGGCAACGCAGCTCAGCGAGCCGCCGAGTGGGGTCTGGTGCTGAAAACCGATACGGAGACCGGAAAGCCCCAAGGGGTAGCAGTGAGAACTTCCGGCGGAGATGAACCAAGCATCGGTAAAACGGAGAAACCGAGAAGAGATTCGAATAACTCAGTCAGAAGCTCCGGGGACATGTCGGATGACGGAGGTAGAGAACGAGGGTTTCTAAGAGTGTCGGATGATTTGAAGGATGCATTGTCAACCTTTCAGCAGACCTTCGTCGTCTCCGACGCGACGAAACCGGATTATCCAATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACACGTCCAGAGAGGTCATCGGAAGAAACTGTCGTTTCATGCAGGGTGCGGATACGGACCCGGAAGATGTGTCGAAGATTAGGGAGGCGCTGCAGGAGGGGACGAGTTACTGCGGGAGGCTACTGAATTATAAGAAAGACGGGACGCCTTTTTGGAATTTACTTACTATTGCGCCAATTAAGGATGAGGCTGGAAAAGTTCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAGGATAAGATGATGCGTCCCAATGGATTGCCTGAGTCCCTGATTAGATATGATGCTCGTCAAAAAGAGATGGCCAATAATTCAGTAACTGAGCTCGTTCAGGCCGTGAAGAGACCACGGTCTCTCAGCGAGTCGACAAATCAACGGCCTTTTAGAAAGTCAGGTGGAAGTGTGGAAGAGGACAAACCAGAACCTCCTGTGAGAAGGAAATCGGAGAGTGTTGCTCCGCCGGTACGAAACTCACAAGGCACTACTCGAAGATCGATGCAAAGTATAAGTGAATTGCCTGAGAAAAAACCAAGAAAATCCATCCGTCTTTCTTTCATGGGGAGATTCATACAGGTCGTTTTGCGTTCCTTGTTCCTCGCCGTACATAACTCAGTTCTGTTTCTGTTGCAGGATGATTCGGAAAAATCAACAGAACAAAGGCCTGACAGTTTGGATGACAAAGTTAGGCAGAGGCAAATGAGAAAGGGTCTTGATCTTGCTACAACCCTTGAACGAATTGAGAAGAACTTCGTCATTACTGATCCGAGGCTGCCTGATAATCCCATTATTTTTGCTTCTGATAGCTTCCTGGAGCTGACGGAGTACAGCCGAGAAGAAATCTTGGGCCGAAATTGCAGGTTCTTACAAGGGCCAGAGACTGATCCAGCGACTGTAAGGAAAATAAGAGAGGCCATTGACAATCACACTGAAGTTACTGTGCAGCTCATCAACTACACAAAGAGCGGGAAAAAATTCTGGAATCTATTTCATCTACAACCTATGCGTGACCAAAAGGGTGAAGTTCAGTACTTCATTGGAGTTCAATTAGATGGTAGTCAACACGTGGAGCCTCTTAAAAATTGTATTCCAGAGGATACAGCACAAGAGAGTGAAAAATTGGTGAGAGAAACCGCAGAAAATGTTGATGAGGCGGTCAGAGAACTTCCAGATGCCAACATGAAACCGGAAGATTTATGGATGAATCACTCCAAAGTTGTTCATCAAAAACCTCACCGGAGAGGAACTCCATCTTGGAAAGCTATACAGAAGATTCTAGATAGTGGTGAGGAGATAGGCTTGAAACATTTTAGGCCAGTTAAGCCTTTAGGATCTGGCGATACCGGCAGTGTGCATCTGGTGGAATTGTACGGTACTGGTCAGCTCTTTGCTATGAAGGCCATGGATAAGGGTGTTATGCTTAATCGAAACAAAGTGCATAGAGCTTGTGCAGAGAGAGAAATTCTCGACCTATTGGACCATCCGTTTCTTCCTGCTTTATATGCTTCTTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCCGGCGGAGAACTTTTCATGCTTCTGGACCGACAACCGGCAAAGGTTATAAAGGAAGATGCCGTCAGATTTTACGCTGCAGAAGTTGTTATTGCCTTGGAGTATCTCCACTGTATAATCTACAGGGACTTGAAGCCTGAAAATGTTCTACTCCAGGGTAATGGCCACGTCTCCTTGACGGATTTCGATTTGTCCTGTTTGACTTCCTGCAAACCTCAGCTTTTGATGCCTGCTCCAAATTTGAAGAAAAAGCATAAGAAAACTCAACAACCCCCTATCTTCATGGCCGAACCGATGAGAGCGTCTAATTCTTTCGTTGGCACGGAGGAATACATCGCTCCTGAAATCATAACTGGGGCAGGCCATACCAGTGCTGTGGACTGGTGGGCATTGGGTATTCTTCTATATGAGATGCTGTACGGATATACGCCATTTAGGGGTAAGACGAGGCAGAAAACGTTTGCCAACATTCTGCAGAAGGATATAAAATTTCCCAGAAGCATACAAGTTAGTCTCAGTTGCAAGCAGTTAATGTACAGATTATTACACAGGGATCCGAAAAATCGATTGGGTTCGAGGGAAGGAGCGAATGAAATAAAGTGTCACCCTTTCTTCCGCGATATAAATTGGGCACTCATTCGATCCATGAATCCTCCCGAGCTCGAGGCTCCGCATTTTGACTCAAAAGAAGCCGACAAGAATGTTAAAGACATTGATCCCGCGCTAGATGATCTACAAGTCAATGTTTTCTGA 3018 46.59 MEHSDNSNAKSSSHVPPFSRDSRGSLEVFNPSTFSATSRPTNAAFRPSPTWQSWVEPRESSEPENLKLSSKSSGTNDEITSWMALKDPTTHQQPASPLTHKTIASIISDKSPAPVAKPSDEVGNAAQRAAEWGLVLKTDTETGKPQGVAVRTSGGDEPSIGKTEKPRRDSNNSVRSSGDMSDDGGRERGFLRVSDDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSREVIGRNCRFMQGADTDPEDVSKIREALQEGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEAGKVLKFIGMQVEVSKHTEGYKDKMMRPNGLPESLIRYDARQKEMANNSVTELVQAVKRPRSLSESTNQRPFRKSGGSVEEDKPEPPVRRKSESVAPPVRNSQGTTRRSMQSISELPEKKPRKSIRLSFMGRFIQVVLRSLFLAVHNSVLFLLQDDSEKSTEQRPDSLDDKVRQRQMRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNHTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPEDTAQESEKLVRETAENVDEAVRELPDANMKPEDLWMNHSKVVHQKPHRRGTPSWKAIQKILDSGEEIGLKHFRPVKPLGSGDTGSVHLVELYGTGQLFAMKAMDKGVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPAKVIKEDAVRFYAAEVVIALEYLHCIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLMPAPNLKKKHKKTQQPPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILQKDIKFPRSIQVSLSCKQLMYRLLHRDPKNRLGSREGANEIKCHPFFRDINWALIRSMNPPELEAPHFDSKEADKNVKDIDPALDDLQVNVF 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48624228 48631594 + Bda006230.1 Bda02g00791 3086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00791 1005 SMART serkin_6 675 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00791 1005 MobiDBLite consensus disorder prediction 136 189 - -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 66 106 - -
Bda02g00791 1005 Pfam Protein kinase domain 678 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00791 1005 SUPERFAMILY Protein kinase-like (PK-like) 657 983 IPR011009 -
Bda02g00791 1005 SUPERFAMILY PYP-like sensor domain (PAS domain) 490 589 IPR035965 -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 370 385 - -
Bda02g00791 1005 Gene3D PAS domain 462 627 - -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 391 407 - -
Bda02g00791 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Bda02g00791 1005 Gene3D PAS domain 207 364 - -
Bda02g00791 1005 SUPERFAMILY PYP-like sensor domain (PAS domain) 214 306 IPR035965 -
Bda02g00791 1005 CDD PAS 220 309 IPR000014 -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 8 59 - -
Bda02g00791 1005 ProSiteProfiles PAS repeat profile. 193 265 IPR000014 -
Bda02g00791 1005 ProSiteProfiles PAC domain profile. 267 321 IPR000700 -
Bda02g00791 1005 TIGRFAM sensory_box: PAS domain S-box protein 220 313 IPR000014 -
Bda02g00791 1005 TIGRFAM sensory_box: PAS domain S-box protein 499 589 IPR000014 -
Bda02g00791 1005 Gene3D Transferase(Phosphotransferase) domain 1 759 980 - -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 158 172 - -
Bda02g00791 1005 Gene3D Phosphorylase Kinase; domain 1 674 989 - -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 351 369 - -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 351 415 - -
Bda02g00791 1005 SMART pac_2 270 312 IPR001610 -
Bda02g00791 1005 SMART pac_2 551 593 IPR001610 -
Bda02g00791 1005 MobiDBLite consensus disorder prediction 1 106 - -
Bda02g00791 1005 ProSiteProfiles Protein kinase domain profile. 675 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00791 1005 ProSiteProfiles PAC domain profile. 548 602 IPR000700 -
Bda02g00791 1005 Pfam PAS domain 497 589 IPR000014 -
Bda02g00791 1005 Pfam PAS domain 214 310 IPR000014 -
Bda02g00791 1005 ProSiteProfiles PAS repeat profile. 474 547 IPR000014 -
Bda02g00791 1005 CDD PAS 489 589 IPR000014 -
Bda02g00791 1005 Coils Coil 606 626 - -
Bda02g00791 1005 PANTHER FLIPPASE KINASE 1-RELATED 141 1005 - -
Bda02g00791 1005 CDD STKc_phototropin_like 673 980 - -
Bda02g00791 1005 ProSitePatterns Protein kinases ATP-binding region signature. 681 704 IPR017441 GO:0005524
Bda02g00791 1005 SMART pas_2 195 265 IPR000014 -
Bda02g00791 1005 SMART pas_2 476 545 IPR000014 -
Bda02g00791 1005 PANTHER PHOTOTROPIN-1 141 1005 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00791 Bda-Chr2:48624228 Bda06g00455 Bda-Chr6:6582510 1.59E-27 dispersed
Bda15g00404 Bda-Chr15:6952390 Bda02g00791 Bda-Chr2:48624228 3.27E-51 dispersed
Bda02g00791 Bda-Chr2:48624228 Bda09g01486 Bda-Chr9:46684330 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69513 PF00069 Pkinase 5.50E-60 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00791 K20715 - jre:108989640 1560.81