Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00797 ATGGGTAAAGGAGGGGAAGACTATGGGAGAAAGCAAAGCTCTGATGTCGACTCTTCCAGTCAAGAAAGTTTTGCTGCATGGGCAAAGGATGTTCGAGAATGCGAAGATAAGTACCAAGTGAATAGAAATTTCGGGTTATCGGCGGAGGAGGTAGTCAAACGGAGAGAGATATATGGTTGGAATGAATTGGAAAAACACGAAGGCACTTCAATTTTCAAATTAATTTTGGAACAGTTCAATGACACCCTTGTTAGAATATTGTTAGTTGCTGCAGTTGTATCTTTTATTCTTGCCTGGTATGATGGGGATGAAGGCGGTGAGATGGAGATTACTGCATTTGTGGAACCACTTGTAATTTTCTTGATCTTGATTGTAAATGCCATTGTGGGGGTTTGGCAGGAGAGCAATGCTGAGAAAGCATTAGAAGCTTTGAAAGAAATTCAGTCGGAACAGGCAACTGTGATTCGAGATGGTAAACGTTTGCCAAATTTTCCTGCAAAGGAACTTGTTCCTGGAGATATAGTGGAATTGAAGGTTGGGGATAAAGTGCCTGCTGATATGCGGGTTTTGAGTTTAATCAGCTCTACTTTCAGGATTGAACAAGGGTCATTGACAGGGGAGAGTGAAGCAGTCAACAAAACTGATAAGGTTGTGCCAGAAAATACTGATATTCAAGGTAAAAAATGTATGGTTTTTGCTGGGACAACTGTAGTGAATGGGAATGCCATATGCTTAGTTACCCAGATAGGGATGAATACTGAAATAGGAAAGGTGCATTCACAGATTCAAGAAGCATCATTAAATGAAGAAGATACTCCATTAAAGAAAAAGTTGAATGAGTTTGGAGAGCTTTTAACTATTATCATTGGAGTGATTTGTGCACTTGTTTGGCTTATCAATGTGAAATACTTTCTCACTTGGGAATACGTTGATGGATGGCCGCGGAACTTTAAGTTCTCCTTCGAGAAGTGCACATATTACTTTGAGATTGCTGTAGCATTGGCTGTTGCTGCTATTCCAGAAGGTCTACCCGCAGTTATAACAACATGCTTGGCACTTGGCACACGAAAAATGGCTCAAAAGAATGCACTTGTTCGGAAGCTGCCTAGTGTTGAAACTCTTGGTTGTACAACTGTCATTTGTTCTGACAAAACAGGTACTTTGACAACCAATCAGATGGCTGTGGCAAAACTTGTGGCTATTGGTTCTAGACCCGGTGCTATTCGGGACTTTGAGGTTGAAGGGACAACATATAATCCTTTTGATGGAAAAATACATGGCTGGCCAAATAAAATGGATGCTAATCTTCAAATGATTGCAAAGATTTCTGCTATCTGTAATGATGCTGGTGTTGAACAATCTGGAAATCATTTCGTTGCCAATGGCATGCCCACCGAAGCAGCATTGAAGGTTTTGGTGGAAAAAATGGGACTTCCTGAAGGAATTGGGTCTGGCTCACATTCTGCTGATGAGGATATTCTGCGGTGCTGTCAACAATGGAAAAAAATTGAACATAGGATTGCAACACTGGAGTTTGATCGAGATCGAAAATCTATGGGAGTAATTTCTTCTTCCAGCTCAGGAAAAAATTTATTACTGGTGAAGGGCGCAGTGGAAAATGTCTTGGAGCGAAGTTCATTCATTCAGTTGCTTGATGGCTCTGTAGCAGAACTGGATGATAATTCAAAAAATGTTATCTTAGAAAGCCTTCATGAAATGTCGACTGGTGCATTAAGATGCTTGGGTTTTGCGTATAAGGAAGAAATTGGCGAGTTTTCAAAATATAACGGAGATGAAGACCATCCTGCTCATGAGCTTTTACTTAACCCATCCAACTACTCCATGATTGAGAGTAATCTGATATTTGTTGGTTTAGTTGGGCTGAGGGATCCTCCTCGGAAAGAAGTACGTCAAGCTATCAAAGACTGCAAAGCTGCCGGAATTCGTGTCATGGTTATAACCGGAGACAACAAGAATACTGCCGAAGCTATTTGTCGTGAAATAGGTGTATTTGGATCTCATGAAAATATTGTCTCAAAAAGCTTAACTGGAAGAGAATTCATGGATATGAACCAACAAAGTCAGAAAATTTATTTGACACAAAGGGGAGGGCTCTTGTTCTCTAGGGCTGAACCTAGGCATAAACAAGAGATCGTGAGGTTGCTTAAAGAGGATGATGAAGTTGTTGCAATGACTGGAGATGGAGTCAATGATGCACCTGCCCTGAAATTGGCCGATATTGGGATAGCCATGGGCATTGCTGGGACTGAGGTTGCAAAGGAAGCCTCTGACATGGTGCTAGCAGATGATAATTTTAGCTCTATAGTCGCTGCAGTTGGTGAAGGAAGATCAATTTACAACAATATGAAGGCATTTATCAGTTTTCCTTGCATTCTCTCCCTTATCAATTGTAAACATTTTTGTAGGTATATGATTTCGTCAAATATCGGTGAGGTTGCCTCCATATTCTTGACAGCTGCTCTAGGCATTCCTGAAGGCATGATACCTGTTCAGCTTCTCTGGGTGAATCTTGTGACAGATGGGCCTCCGGCAACAGCACTCGGTTTCAATCCTCCAGACAAAGATATAATGAAGAAACCACCAAGAAGAAGCAATGATTCATTGATTACTGCTTGGATTTTATTCCGCTATCTGGTTATTGGACTCTACGTGGGGATAGCAACAGTGGGAGTGTTTGTCATCTGGTACACACATTCCTCATTCTTAGGCATTGACTTAAGTGGGGATGGTCATAGTCTTGTTACCTACTCTCAACTTGCAAGCTGGGATCAGTGCGCTTCTTGGGAAGGATTTTCCGCCTCGCCCTTTTCAGCTGGGAGCCAAGTCTTCAATTTCGACTCAAATCCGTGCGAATACTTCAAATCCGGTAAAATTAAGGCCTCTACACTCTCTCTTTCCGTCTTGGTAGCGATCGAGATGTTCAATTCCCTGAATGCACTTTCTGAAGATGGGAGTCTTCTTACAATGCCCCCTTGGGTTAACCCTTGGCTCCTTATCGCCATGTCCGTCTCATTTGGGCTGCACTTTCTCATCCTCTACGTGCCAATCCTTGCTCAAATATTTGGCATAGTCCCTCTCAGCTTGAACGAATGGCTCTTGGTGTTGGCGGTTTCTCTTCCCGTGATTCTAATCGATGAGATTTTGAAGCTTGTCGGAAGGTTTACGAGCGGATTCAGAAATTCAAGTTCGAGCAAGTCTTCAAAGCGAAAGTCGGAGTAA 3240 42.07 MGKGGEDYGRKQSSDVDSSSQESFAAWAKDVRECEDKYQVNRNFGLSAEEVVKRREIYGWNELEKHEGTSIFKLILEQFNDTLVRILLVAAVVSFILAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEQATVIRDGKRLPNFPAKELVPGDIVELKVGDKVPADMRVLSLISSTFRIEQGSLTGESEAVNKTDKVVPENTDIQGKKCMVFAGTTVVNGNAICLVTQIGMNTEIGKVHSQIQEASLNEEDTPLKKKLNEFGELLTIIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAIGSRPGAIRDFEVEGTTYNPFDGKIHGWPNKMDANLQMIAKISAICNDAGVEQSGNHFVANGMPTEAALKVLVEKMGLPEGIGSGSHSADEDILRCCQQWKKIEHRIATLEFDRDRKSMGVISSSSSGKNLLLVKGAVENVLERSSFIQLLDGSVAELDDNSKNVILESLHEMSTGALRCLGFAYKEEIGEFSKYNGDEDHPAHELLLNPSNYSMIESNLIFVGLVGLRDPPRKEVRQAIKDCKAAGIRVMVITGDNKNTAEAICREIGVFGSHENIVSKSLTGREFMDMNQQSQKIYLTQRGGLLFSRAEPRHKQEIVRLLKEDDEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFISFPCILSLINCKHFCRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSNDSLITAWILFRYLVIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHSLVTYSQLASWDQCASWEGFSASPFSAGSQVFNFDSNPCEYFKSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLIAMSVSFGLHFLILYVPILAQIFGIVPLSLNEWLLVLAVSLPVILIDEILKLVGRFTSGFRNSSSSKSSKRKSE 1079
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48657146 48662279 - Bda006236.1 Bda02g00797 3092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00797 1079 Gene3D - 391 631 IPR023299 GO:0000166
Bda02g00797 1079 PRINTS P-type cation-transporting ATPase superfamily signature 756 768 - -
Bda02g00797 1079 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Bda02g00797 1079 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Bda02g00797 1079 PRINTS P-type cation-transporting ATPase superfamily signature 732 751 - -
Bda02g00797 1079 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Bda02g00797 1079 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Bda02g00797 1079 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1078 - -
Bda02g00797 1079 SUPERFAMILY Calcium ATPase, transduction domain A 149 260 IPR008250 -
Bda02g00797 1079 Pfam haloacid dehalogenase-like hydrolase 378 746 - -
Bda02g00797 1079 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Bda02g00797 1079 Pfam E1-E2 ATPase 147 361 - -
Bda02g00797 1079 SFLD p-type atpase 362 784 IPR044492 -
Bda02g00797 1079 SFLD Haloacid Dehalogenase 362 784 - -
Bda02g00797 1079 Gene3D - 45 263 - -
Bda02g00797 1079 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Bda02g00797 1079 Pfam Cation transporting ATPase, C-terminus 832 1058 IPR006068 -
Bda02g00797 1079 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda02g00797 1079 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 231 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda02g00797 1079 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 706 803 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda02g00797 1079 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1078 - -
Bda02g00797 1079 SUPERFAMILY HAD-like 379 851 IPR036412 -
Bda02g00797 1079 MobiDBLite consensus disorder prediction 1 21 - -
Bda02g00797 1079 Gene3D - 77 1060 - -
Bda02g00797 1079 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Bda02g00797 1079 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 1061 IPR023298 -
Bda02g00797 1079 Gene3D - 378 777 IPR023214 -
Bda02g00797 1079 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 628 IPR023299 GO:0000166
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00797 Bda09g01488 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00797 Bda-Chr2:48657146 Bda12g01035 Bda-Chr12:42089457 4.56E-106 dispersed
Bda08g01381 Bda-Chr8:54563505 Bda02g00797 Bda-Chr2:48657146 0 transposed
Bda02g00797 Bda-Chr2:48657146 Bda09g01488 Bda-Chr9:46698681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00797 K01537 - tcc:18590783 1779.61