Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00813 ATGGCTGGTAAGGGTGATGGACCGGCGATTGGAATTGACTTGGGAACGACGTACTCGTGTGTCGGTGTCTGGCAGCACGATCGCGTTGAGATCATAGCCAATGATCAGGGAAACAGAACAACGCCTTCTTATGTTGCGTTTACTGATACGGAGAGGTTGATTGGAGATGCAGCTAAGAATCAGGTTGCAATGAACCCAGTCAATACTGTTTTCGATGCTAAACGTCTAATTGGAAGGCGATTTAGCGATGCTCCAGTGCAGGGTGATATGAAATTGTGGCCCTTCAAGGTGATTCCTGGTCCTGGCGATAAGCCCATGATTGTTGTTACTTACAAAGGCGAGGAAAAACAGTTTTCGGCCGAGGAGATATCTTCAATGGTTCTTATTAAGATGAAGGAAATTGCGGAGGCCTACCTCGGGACAACTATTAAGAATGCAGTTGTTACCGTTCCTGCATATTTCAATGATTCTCAAAGACAAGCCACAAAGGACGCCGGAGTAATTGCTGGCCTGAACGTTATGCGTATCATCAATGAACCAACTGCTGCTGCCATTGCCTACGGACTTGATAAAAAGGCAGGGAGTTCCGGCGAGAAGAACGTGCTTATCTTTGATCTAGGTGGTGGCACTTTTGATGTTTCCCTTCTGACCATCGAAGAGGGTATTTTTGAGGTGAAAGCTACCGCAGGAGATACGCATTTGGGAGGTGAAGATTTTGACAATAGGATGGTGAACCATTTCGTCCAGGAGTTTAAGAGGAAGAACAAAAAGGACATCAGTGGTAATCCCAGGTCCTTGAGAAGGTTGAGAACTGCTTGTGAGAGGGCTAAGAGGACTCTCTCATCAACCGCTCAGACAACGATAGAGATTGATTCTTTGTATGAAGGTATTGATTTCTACACAACGATAACACGAGCAAGATTTGAGGAGTTGAATATGGATCTCTTCCGGAAATGTATGGAGCCAGTTGAAAAGTGTTTGAGAGATGCCAAGATGGACAAAAGTAGTGTCCACGATGTAGTTTTGGTGGGGGGATCTACCAGAATTCCAAAAGTTCAACAATTGCTGCAGGATTTCTTCAACGGGAAGGAGCTTTGCAAGAGCATTAACCCTGATGAGGCAGTTGCTTATGGAGCTGCGGTTCAGGCTGCTATTTTGAGCGGTGAGGGCAATGAGAAGGTGCAGGATCTGTTGTTGCTGGATGTTACACCCCTCTCCCTTGGCCTGGAAACTGCTGGAGGTGTCATGACAGTATTGATTCCTCGAAATACTACTATTCCCACCAAGAAAGAGCAGGTATTCTCCACCTACTCAGACAACCAACCAGGTGTGTTAATTCAGGTATACGAGGGGGAGCGAACAAGAACTCGAGACAACAATTTGCTTGGAAAGTTCGAACTCTCTGGCATTCCACCTGCTCCTAGAGGAGTTCCCCAGATCACTGTGTGTTTCGACATTGACGCCAATGGTATTCTGAATGTATCTGCCGAAGATAAAACCACCGGACAGAAGAACAAGATTACAATCACCAATGACAAAGGCAGACTATCAAAGGAGGAGATCGAGAAGATGGTACAGGAAGCTGAGAAGTACAAGTCAGAGGATGAGGAGCACAAGAAAAAGGTAGAGGCCAAAAACGCCTTGGAGAATTACGCATACAACATGAGGAACACAATTAAGGACGAAAAGATTGCTTCAAAACTCCCTGCTGCCGACAAGAAAAAGATAGAGGATGCAGTTGAACAAGCCATCCAGTGGCTCGAAGCAAACCAGCTTGCTGAGGCAGACGAGTTTGAGGATAAGATGAAAGAGCTAGAGAGCCTCTGCAACCCAATTATCGCCAAAATGTACCAAGGAGCCGGCGGCGACATGGGCAGCGGCATGGATGAAGATGGTCCCTCATATGGAGCGGGAGGCGGTGCTGGTTCAGGAGCGGGGCCAAAAATTGAGGAGGTTGATTAA 1962 46.64 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDAPVQGDMKLWPFKVIPGPGDKPMIVVTYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKAGSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAVEQAIQWLEANQLAEADEFEDKMKELESLCNPIIAKMYQGAGGDMGSGMDEDGPSYGAGGGAGSGAGPKIEEVD 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48756502 48758883 + Bda006254.1 Bda02g00813 3108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00813 653 MobiDBLite consensus disorder prediction 621 653 - -
Bda02g00813 653 Gene3D - 545 619 IPR029048 -
Bda02g00813 653 Coils Coil 588 608 - -
Bda02g00813 653 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Bda02g00813 653 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Bda02g00813 653 Coils Coil 521 541 - -
Bda02g00813 653 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Bda02g00813 653 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bda02g00813 653 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Bda02g00813 653 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Bda02g00813 653 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Bda02g00813 653 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Bda02g00813 653 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Bda02g00813 653 Gene3D - 192 366 - -
Bda02g00813 653 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Bda02g00813 653 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Bda02g00813 653 Gene3D - 71 126 - -
Bda02g00813 653 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
Bda02g00813 653 Gene3D Actin; Chain A, domain 4 235 318 - -
Bda02g00813 653 Gene3D - 10 384 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 209 219 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 58 66 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 36 48 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 396 415 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 146 166 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 369 389 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 477 493 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 8 21 - -
Bda02g00813 653 PRINTS 70kDa heat shock protein signature 337 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00813 Bda-Chr2:48756502 Bda08g00658 Bda-Chr8:6863907 0 dispersed
Bda09g00902 Bda-Chr9:25240003 Bda02g00813 Bda-Chr2:48756502 0 transposed
Bda11g00572 Bda-Chr11:5898803 Bda02g00813 Bda-Chr2:48756502 6.70E-87 transposed
Bda14g00118 Bda-Chr14:808053 Bda02g00813 Bda-Chr2:48756502 0 wgd
Bda15g00221 Bda-Chr15:4939002 Bda02g00813 Bda-Chr2:48756502 0 wgd
Bda02g00813 Bda-Chr2:48756502 Bda03g00776 Bda-Chr3:6509888 0 wgd
Bda02g00813 Bda-Chr2:48756502 Bda05g00971 Bda-Chr5:58206516 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00813 K03283 - twl:119990582 1212.98