Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00820 ATGGGTAACGGCGTTGGAAAGCTTAGCGCTTGTTTTACCGGGGAAGTGGATGGTCGCCGGAGACCGTATATATCTGTTTTGTTCTCGGATCCTCTCGACGAGGGTTTGGGCCATTCGTTTTGCTACGTGCGTCCCGATCCCTCTCTGCTTTCTTCTTCCAAGGTTCATTCGGATGAAGCCACCACTTTCAGAGCAATCTCTGGTGCTTCTGTTAGTGCTAACACGTCTACTCCTCTCTCTACATCTTTGATTGATCTGTATTCCTACCCCAGTATTGATCGAGCTGCGGCCTTCGAGAGCTCGACTTCTTTCGCTTCAATTCCTCTTCAGCCGGTAAATTCTGGGCCGATTTATGGGAACAACTACTATGGTGGAGTTTCTGCCTCTGGACCTCTTGAAAGAGGATTTCTATCGGGTCCGATTGAGCGAGGAATTATGTCGGGTCCGCTGGATCGTGGTATTTTTTCGGGTCCTCTGGAGAAGGCTTGCTCTAATGACTTTCAGAGGAGCTTCTCTCATGGAGGTTTTGCTTCTAGATCCAGATCGAAAACTAGCCGACTTATTGGGATTCTTCGTAGAGCACTGTCGAAGACCGTCTCTCGAGGACAGAACTCCATAGTCGCGCCGATTAAAGGAATGAAAGAACCGGATTGGATAATCGGACCGGAGAAGCACAACGAGAATTTGACGGTGAGTAGTTTAAATTTAAGCAGCGATGGTAGCTTGGAGGAGGAAGATTCTATGGAGAGCCAGAATCTTCAGTGGGCTCAAGGTAAAGCCGGAGAGGATCGAGTTCACGTGGTTGTCTCGGAGGAGCATGGCTGGGTTTTCGTCGGAATCTATGACGGCTTCAACGGCCCTGATGCACCCGATTACCTTCTAACAAACTTGTACTCTGCCGTACACAAGGAGCTCAAAGGATTATTATGGGACGAAAAGTCATCAATTCCCCTGCTTCGATCTGAAAATCCCCTTTCAGAAACGGCAGATTCTGCACCGGTTTGTGACGGCGATTCTGTGAGGAATCAGACGGCCGGGGCTTGCAGTGGGACAGGAACTTTCGATTCGAATTCAAGAAGACGAAAGGGAAGAAATTCAAGAGGAAAATACCGTGGAGCAGCCAAGAAGTGGGAGGATAATCAGAGAAGATGGAAGTGCGAGTGGGACAGAGAGAGACAAGAACTTGATCGTAGGTTGAAAGAACAGCTAAATCGATCTGATTCCGACTGTCTTAGATCGATCAATCACTCAGATGTGTTGAAAGCGCTGTCTCAAGCGCTGAGAAAGACAGAGGAGTCTTACTTAGATATTGCAGATAAGATGCTTGTGGAAAATCCTGAGCTAGCTCTAATGGGATCTTGTGTGCTCGTAATGCTCATGAAAGGAGACGACGTTTATGTAATGAATGTGGGCGATAGTCGGGCCGTTCTAGCTCAGAAAGAACCCGATTATTGGCTCGGAAGAATCTCAAACGACCTGGAAAAGATAAATGAAGAAACAATGTATGATCTCGAAGCAGTAGATGCTGATCGAACCTATACAGTTTGCAATTTAACTGCCACTCAACTTTCCATGGATCACAGCACAAGTGTAGAAGAGTTCAGAGGATTAAAAAACAAACACCCGGACGATGCTTGTGCGGTGATGAACGATCGGGTGAAAGGCTCGTTGAAGGTCACCCGAGCATTTGGGGCTGGATTTCTCAAACAGCCAAAATGGAATAATGCACTTCTAGAGGCGTTCAGAATAGACTACATAGGAACATCCCCATATATCACTTGTTCTCCATCTCTCTACCACCATAGACTTGGCTCCAAAGACAGGTTTTTGATATTATCTTCTGATGGCCTCTACCAATACTTCACAAATGAGGAAGCTGTTTCAGAAGTTGAACTTTTCATCCAATTACAACCCGAAGGAGACCCGGCTCAGCATCTCGTAGAGGAAGTCCTCTTTCGGGCTGCAAAAAAAGCAGGCATGGATTTTCACGAATTGCTTGAAATCCCGCAAGGTGACCGGAGGAGATATCACGATGACGTTTCGATCATTGTAATTTCCTTAGAGGGAAGGATTTGGAGATCCTGCGTATAA 2091 46.68 MGNGVGKLSACFTGEVDGRRRPYISVLFSDPLDEGLGHSFCYVRPDPSLLSSSKVHSDEATTFRAISGASVSANTSTPLSTSLIDLYSYPSIDRAAAFESSTSFASIPLQPVNSGPIYGNNYYGGVSASGPLERGFLSGPIERGIMSGPLDRGIFSGPLEKACSNDFQRSFSHGGFASRSRSKTSRLIGILRRALSKTVSRGQNSIVAPIKGMKEPDWIIGPEKHNENLTVSSLNLSSDGSLEEEDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLTNLYSAVHKELKGLLWDEKSSIPLLRSENPLSETADSAPVCDGDSVRNQTAGACSGTGTFDSNSRRRKGRNSRGKYRGAAKKWEDNQRRWKCEWDRERQELDRRLKEQLNRSDSDCLRSINHSDVLKALSQALRKTEESYLDIADKMLVENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKEPDYWLGRISNDLEKINEETMYDLEAVDADRTYTVCNLTATQLSMDHSTSVEEFRGLKNKHPDDACAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEAFRIDYIGTSPYITCSPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFIQLQPEGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48798373 48800967 - Bda006261.1 Bda02g00820 3115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00820 696 ProSiteProfiles PPM-type phosphatase domain profile. 245 687 IPR001932 -
Bda02g00820 696 CDD PP2Cc 392 687 IPR001932 -
Bda02g00820 696 SMART PP2C_4 246 685 IPR001932 -
Bda02g00820 696 Gene3D - 223 692 IPR036457 -
Bda02g00820 696 PANTHER - 12 696 - -
Bda02g00820 696 MobiDBLite consensus disorder prediction 346 373 - -
Bda02g00820 696 SUPERFAMILY PP2C-like 259 688 IPR036457 -
Bda02g00820 696 PANTHER PROTEIN PHOSPHATASE 2C 12 696 IPR015655 GO:0004722|GO:0006470
Bda02g00820 696 Pfam Protein phosphatase 2C 409 651 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00820 Bda-Chr2:48798373 Bda06g01285 Bda-Chr6:43426806 8.00E-174 dispersed
Bda02g00820 Bda-Chr2:48798373 Bda03g00781 Bda-Chr3:6534109 0 wgd
Bda02g00820 Bda-Chr2:48798373 Bda09g01506 Bda-Chr9:46826262 1.70E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00820 - - csv:101222644 1084.32