Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00824 ATGGCGGTCTTTGTAGCATCCCTAGCATGCCTTGTATCATTAATGTGGGTAGCTGAAGGAAGAATTCCTGGCGTTTACAATGGTGGAGCATGGGAGAGCGCTCATGCTACATTCTATGGAGGTTCTGATGCTTCTGGTACAATGGGAGGAGCTTGTGGGTACGGAAATCTGTACAGCCAAGGCTACGGAGTGAACACGGCGGCGCTTAGTACAGCGCTGTTCAACAGTGGCCTGAGATGCGGCGCATGCTTCGAGATAAAGTGCGCAAACGATCGACAGTGGTGTCATTCCGGAAGCCCATCCATCTTCATTACCGCTACTAACTTTTGTCCACCCAACTACGCTCTTCCAAACGACCATGGCGGTTGGTGCAACCCCCCTCGCCCTCACTTCGACCTCGCCATGCCTATGTTTCTCAAGATCGCCGAATACCGCGCCGGAATCGTTCCCGTCGCTTACCGCCGAGTCCCATGCCGGAAACAGGGAGGGATGAGATTTACGATAAACGGATTCCGGTACTTCAACTTGATTCTGATCTCGAACGTCGCGGGTGCAGGGGATTTAGTGAGGGTGAGCGTGAAAGGGACGAAGACTGGTTGGATGAGCATGAGCAGAAACTGGGGTCAAAACTGGCAGTCAAACGCACTTCTGGTAGGGCAGTCATTGTCATTCAGGGTGACAGGCAGTGACAGAAGAACCTCCACCTCCTGGAACATCGTCCCATCCCATTGGCAGTTCGGTCAAACTTTCATCGGCAAGAACTTCAGAGTCTGA 774 52.71 MAVFVASLACLVSLMWVAEGRIPGVYNGGAWESAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLRCGACFEIKCANDRQWCHSGSPSIFITATNFCPPNYALPNDHGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGMRFTINGFRYFNLILISNVAGAGDLVRVSVKGTKTGWMSMSRNWGQNWQSNALLVGQSLSFRVTGSDRRTSTSWNIVPSHWQFGQTFIGKNFRV 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48835106 48836083 - Bda006264.1 Bda02g00824 3119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00824 257 Gene3D - 17 159 IPR036908 -
Bda02g00824 257 Pfam Lytic transglycolase 66 153 IPR009009 -
Bda02g00824 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Bda02g00824 257 SUPERFAMILY Barwin-like endoglucanases 10 181 IPR036908 -
Bda02g00824 257 SMART dpbb_1 66 153 IPR007112 -
Bda02g00824 257 Gene3D - 164 255 IPR036749 -
Bda02g00824 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bda02g00824 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Bda02g00824 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bda02g00824 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Bda02g00824 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Bda02g00824 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bda02g00824 257 SUPERFAMILY PHL pollen allergen 160 251 IPR036749 -
Bda02g00824 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Bda02g00824 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Bda02g00824 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Bda02g00824 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 163 IPR007112 -
Bda02g00824 257 PANTHER EXPANSIN-A15 7 256 IPR002963 GO:0009664
Bda02g00824 257 PANTHER EXPANSIN 7 256 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00824 Bda09g01508 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00226 Bda-Chr1:26088656 Bda02g00824 Bda-Chr2:48835106 3.99E-129 dispersed
Bda02g00824 Bda-Chr2:48835106 Bda15g00345 Bda-Chr15:6303251 1.54E-152 dispersed
Bda03g00726 Bda-Chr3:6128899 Bda02g00824 Bda-Chr2:48835106 6.66E-112 dispersed
Bda15g00228 Bda-Chr15:4971370 Bda02g00824 Bda-Chr2:48835106 5.98E-161 wgd
Bda15g00354 Bda-Chr15:6419088 Bda02g00824 Bda-Chr2:48835106 2.79E-152 wgd
Bda02g00824 Bda-Chr2:48835106 Bda03g00784 Bda-Chr3:6554733 1.13E-159 wgd
Bda02g00824 Bda-Chr2:48835106 Bda05g00964 Bda-Chr5:58134678 5.91E-170 wgd
Bda02g00824 Bda-Chr2:48835106 Bda09g01508 Bda-Chr9:46841799 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00824 - - qsu:112016081 498.434