Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00832 ATGGGCGACATCTGCTGCGGTGTTTTTACAGACGGCGACAACTCCTCTCGCCGCGACTCCAGCTCTCGTTTGGCTAGGCGGCGGAGGATGGTGATCAGAAAGGTTAAGCTTATACCGCCATCGGAGGCGGAGAGAGAGCGTAAACGTCCGAAGCTTGAGATTTGTGCCGGATCGTCGTCTAGGGACTGCCATCGCCCAGCGGAGAGCTGTGTTTTCGAGCATGGAAAGCGGAACAAGTTGGTAGGGACTAGACGAATGGGGACTAAGGAGATCTCATGTTCTGGTGAGTCATACACCTTTCAAGTGCCGATGACGCGTCAATCTTGCTCCGAACTTCTTAACCCGAAAAATCCCAACGACTCTCCAAAGTTCTGGACTGCTTCGGTGTGTGGAAGGCGGAGAGAAATGGAGGACGCTGTGACTATTCACCCTTCCTTTTTCCGGCGAGACCACGAAAAGATATCTTCTTCGTTTCACTATTTTGGTGTGTATGACGGCTATGGATGCTCACACGTTTCTACCAGGTGCCGAGAACGACTCCATCAGCTGGTGAAAGAAGAGCTGGAAAAAACGGAACCACCGGTAAAGGAGTGGACAAATATCATGGAGAGGAGCTTCCTGCGAATGGATAAGGAGGTAGTTGTGTCAAATAATAATAGTAGTGCAGCTACCAAATGCAGATGCGCGCTTCAGTGGCCGCAGTGCGATGCGGTCGGATCTACGGCTGTTGTTTCGATTCTTACTCCCGATAAGATCATTGTGGCGAACTGCGGCGACTCGAGAGCAGTGCTTTGTCGAAACGGACAACCCATACCTCTATCTTCCGATCACAAACCGGATCGTCCAGACGAACTGAGTCGAATCAGTGCCGCGGGTGGACGAGTAATCTATTGGGACGGTCCTCGAGTTCTCGGAGTTCTAGCCATGTCCAGGGCTATAGGTGAGCTGGTGAATCATGATTCGAAAGCTCTCGATTTTTACGCTAGTGCAGGCGATAACCACCTCAAGCCATACGTGATCTGTGAGCCAGAAGTAACGTCGACCGAACGGAAGGAGGACGACGAGTGCCTTATTCTAGGCAGCGACGGGCTGTGGGACGTGGTGTCGAACGAGATGGCGTGCAGGATGGTGCTCATGTGCTTGCGAGGGAAGAAGGACGAGGAAAAGAGCGACGGCGGGGGAGAGACGGCGGACGAGGCATGTACTGAAGCATCCATGGTGCTTACGAAGCTGGCTTTGGGGAGGGGAAGCTCGGACAATGTCAGCGTGGTGGTGGTGGATCTGAGGACGGACACGTGGGATAACAAGAACGTTTCTTGTCGCTGA 1326 53.02 MGDICCGVFTDGDNSSRRDSSSRLARRRRMVIRKVKLIPPSEAERERKRPKLEICAGSSSRDCHRPAESCVFEHGKRNKLVGTRRMGTKEISCSGESYTFQVPMTRQSCSELLNPKNPNDSPKFWTASVCGRRREMEDAVTIHPSFFRRDHEKISSSFHYFGVYDGYGCSHVSTRCRERLHQLVKEELEKTEPPVKEWTNIMERSFLRMDKEVVVSNNNSSAATKCRCALQWPQCDAVGSTAVVSILTPDKIIVANCGDSRAVLCRNGQPIPLSSDHKPDRPDELSRISAAGGRVIYWDGPRVLGVLAMSRAIGELVNHDSKALDFYASAGDNHLKPYVICEPEVTSTERKEDDECLILGSDGLWDVVSNEMACRMVLMCLRGKKDEEKSDGGGETADEACTEASMVLTKLALGRGSSDNVSVVVVDLRTDTWDNKNVSCR 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48900353 48902026 + Bda006271.1 Bda02g00832 3127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00832 441 Pfam Protein phosphatase 2C 128 421 IPR001932 -
Bda02g00832 441 SUPERFAMILY PP2C-like 121 429 IPR036457 -
Bda02g00832 441 PANTHER PROTEIN PHOSPHATASE 2C 37 330 431 - -
Bda02g00832 441 SMART PP2C_4 111 426 IPR001932 -
Bda02g00832 441 CDD PP2Cc 127 416 IPR001932 -
Bda02g00832 441 Gene3D - 115 435 IPR036457 -
Bda02g00832 441 ProSiteProfiles PPM-type phosphatase domain profile. 123 428 IPR001932 -
Bda02g00832 441 PANTHER PROTEIN PHOSPHATASE 2C 37 71 315 - -
Bda02g00832 441 PANTHER ALPHABET, ISOFORM E-RELATED 71 315 - -
Bda02g00832 441 PANTHER ALPHABET, ISOFORM E-RELATED 330 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00832 Bda07g00571 CCT
Bda02g00832 Bda07g00571 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00832 Bda-Chr2:48900353 Bda03g00136 Bda-Chr3:1182055 4.35E-76 dispersed
Bda14g00146 Bda-Chr14:997516 Bda02g00832 Bda-Chr2:48900353 2.38E-116 wgd
Bda02g00832 Bda-Chr2:48900353 Bda07g00571 Bda-Chr7:7048753 2.64E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00832 K14497 - jre:108998487 458.373