Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00881 ATGGCCGCGGAGGCCACAGGGACGGCAACCAAGTTTCAAGGCCCGGACTTTCGGCCAGTCCCTCCTCCTCCTGATTTCAATCGCGAAGTTACGGTTTCTACTCACGATGGTCTCCGCTTCTGGCAATTCATGGTTGCAGGCTCGATCGCTGGATCGGTCGAGCACATGGCTATGTTTCCTGTTGACACGGTCAAGACTCATATGCAAGCCCTTAGATCATGTCCAATCAGATCTGTCGGCGTGCGACATGCCCTCCAGTCAATTTTGAAGTCCGAGGGACCTGCCGGTCTGTATCGCGGGATCGGGGCTATGGCTCTCGGTGCCGGTCCAGCCCACGCAGTGTATTTTTCAGTATACGAGTTTTGTAAGAAATTCTTCTCCAAAGGGCGCCCCGATAATTCGGCCGCCCATGCCATTTCCGGCGTGTTTGCTACGGTTGCGAGTGATGCAGTCTTTACGCCGATGGACATGGTGAAGCAGAGATTGCAGTTGGGTATAAGTTCCTACAATGGGGTCTTGGATTGTGTAAAGAGAGTTCTTCGGGAAGAAGGTTTCGGAGCATTCTATGCATCCTATAAGACGACTGTTCTGATGAATGCGCCATATACTGCTGTACATTTCGCAACTTATGAGGCTGCAAAGCGGGCTTTGATGGAAATTTCTCCTGAAAGTGCAAGTGATGAGCAGTGGGTTGTTCATGCCACTGCCGGAGCTGCTGCCGGTGCATCGGCAGCTGTCGTCACAACGCCACTGGACGTAGTTAAAACTCAATTACAGTGTCAGGGGGTATGTGGATGTGATAGATATAAAAATGGGTCAATAAGGGATGTGATTGGGAGTATAGTTAGCAAGGATGGAACAAGAGGGCTCATGAGGGGCTGGATTCCGAGGATGCTTTTCCATGCTCCTGCTGCAGCCATATGCTGGTCTACATATGAAGCCTCAAAATCCTTCTTCAAAGAGCTCAATGAGCGTTGA 978 50.82 MAAEATGTATKFQGPDFRPVPPPPDFNREVTVSTHDGLRFWQFMVAGSIAGSVEHMAMFPVDTVKTHMQALRSCPIRSVGVRHALQSILKSEGPAGLYRGIGAMALGAGPAHAVYFSVYEFCKKFFSKGRPDNSAAHAISGVFATVASDAVFTPMDMVKQRLQLGISSYNGVLDCVKRVLREEGFGAFYASYKTTVLMNAPYTAVHFATYEAAKRALMEISPESASDEQWVVHATAGAAAGASAAVVTTPLDVVKTQLQCQGVCGCDRYKNGSIRDVIGSIVSKDGTRGLMRGWIPRMLFHAPAAAICWSTYEASKSFFKELNER 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 49183777 49185604 + Bda006321.1 Bda02g00881 3176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00881 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Bda02g00881 325 PANTHER MITOFERRIN-1-RELATED 5 324 - -
Bda02g00881 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 324 - -
Bda02g00881 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Bda02g00881 325 SUPERFAMILY Mitochondrial carrier 36 313 IPR023395 -
Bda02g00881 325 MobiDBLite consensus disorder prediction 1 26 - -
Bda02g00881 325 Pfam Mitochondrial carrier protein 228 321 IPR018108 -
Bda02g00881 325 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Bda02g00881 325 Pfam Mitochondrial carrier protein 133 219 IPR018108 -
Bda02g00881 325 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Bda02g00881 325 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Bda02g00881 325 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Bda02g00881 325 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Bda02g00881 325 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Bda02g00881 325 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Bda02g00881 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Bda02g00881 325 Gene3D Mitochondrial carrier domain 133 325 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00881 Bda-Chr2:49183777 Bda09g01563 Bda-Chr9:47179361 0 dispersed
Bda02g00881 Bda-Chr2:49183777 Bda12g00204 Bda-Chr12:2014370 1.26E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00881 K15113 - csv:101215924 523.472