Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00883 | ATGGCGGCTTCTTTTGGGAGCATAGACCCGCCTGCGAATTCCCATCCACACTTAACTTTCACCATACCCTCCTTCTCCGAGCTCTTGAGGTATGGTTCCGATGAGGTACAGCCAACCGGCAGTAATGGCCGCCTCGGATTGTCGGATCGAACAGCGGAACGAACCGGGTCGGGTGTGCCCAAGTTCAAGTCTTTTTCTCCACCGATACTGCCGTTGTCTCCACCTCCACTTTCTCCCTCTTCTTACTTCTCTATTCTTGCTGGGCTGAGCCCGGCTGAGCTCTTAGACTCCCCTGTTCTCTTTAACTCCTCTAACCATACTCTGCCATCACCGACGACGGGAGCATTTCCATTCCAATCGTTCAACTGGAAGAGTAATTCCGACTTCAGCCAACAGATGATTGAGCCCGCTAGCAAAAAATTGTCTGTTTTCTCCTTTCAAACGCAGCCAAAGCCTCCCTCAGCCAGCTCTAATCCTACTGTATGTGAAGAGAGTCGGATACAAAAATTTCTCAACTCTCAGCCTCAGCAACAGGCATGGAGCTCTCAAGAACCATCGAAGCAGAACGAATTTTCATTGGGAATGGATGCAAAACAGGGTGATTTCACATCGAAAAAGATAGTTCATCGTCCAAACAATGGAGTTATCCAATCGAATCACAGCAACCGCCAACAGGGTCAGTCAGTGAGCAGAGGCTCCGACGATGGTTACAACTGGAGAAAGTACGGCCAGAAAGAGGTGAAAGGAAGCGAAAATCCAAGAAGTTATTACAAATGCACATTCCCCAGTTGCCCCACTAAGAAGAAGGTGGAAAGGTCGTTAGACGGCCAAATTACTGAAATTGTCTACAAGGGCAGCCATAGCCATCCAAAACCTCAGCCTACCAGAAAATCCTCATCATCATCATTTTTAGCTCCTTTTCAGTCAATTCAAGCTTCTAATCTTGCTCTCAACGGCGCCCCTGAACTTTCATCTGCCTCCCACTCCGCTGCAACGCCTGAAAATTCCTCCATAACAATGGGGGAAGATGATTTTGACCAGAGCTCGCATAGCAGTAAACGGGAACGGAATGACTTTGACGAGGACGAACCAGATGCCAAAAGATGCAGTAAAATGGAGGGGGACAAAGAAGGAATGTCAGCAGTTGGATGCAGAACAGTGAGAGAGCCTAGAGTCGTGTTTCAAACCACTAGTGACAGAGATATCTTAGTCGATGGATACAGGTGGAAAAAATATGGGCAGAAAGTCGTGAAGGGAAACCCAAGTCCAAGGAGCTACTACAAGTGCACAAACCCAGAATGTCCTGTGAGAAAGCACGTAGAGAGAGCCTCGAATGATTTAAAATCAGTCATTACGACCTACGAGGGGAAGCACAATCACGATGTTCCAGCCGCTCGTGGAAGCGGCACTAATGCTGTAACCAGGCCATTACCCACGACAATCAAGCCTTTGTCTCTTAGCCATGGTCTAAGGCTACAGAGCTCTCACGGCCAAACACCATTCGACCTGGAAACGATGAGGAGCCCTCCAAGTTTTGGATTCTCCGAATCTCACAACATGTTGTGGCGAAGTAAGGAAGAGATAAAGGATGATGCTTTCTTCGAATCATTGCTACGTTGA | 1620 | 47.96 | MAASFGSIDPPANSHPHLTFTIPSFSELLRYGSDEVQPTGSNGRLGLSDRTAERTGSGVPKFKSFSPPILPLSPPPLSPSSYFSILAGLSPAELLDSPVLFNSSNHTLPSPTTGAFPFQSFNWKSNSDFSQQMIEPASKKLSVFSFQTQPKPPSASSNPTVCEESRIQKFLNSQPQQQAWSSQEPSKQNEFSLGMDAKQGDFTSKKIVHRPNNGVIQSNHSNRQQGQSVSRGSDDGYNWRKYGQKEVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHSHPKPQPTRKSSSSSFLAPFQSIQASNLALNGAPELSSASHSAATPENSSITMGEDDFDQSSHSSKRERNDFDEDEPDAKRCSKMEGDKEGMSAVGCRTVREPRVVFQTTSDRDILVDGYRWKKYGQKVVKGNPSPRSYYKCTNPECPVRKHVERASNDLKSVITTYEGKHNHDVPAARGSGTNAVTRPLPTTIKPLSLSHGLRLQSSHGQTPFDLETMRSPPSFGFSESHNMLWRSKEEIKDDAFFESLLR | 539 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 49193214 | 49195178 | - | Bda006323.1 | Bda02g00883 | 3178 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 209 | 240 | - | - | |
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 210 | 234 | - | - | |
Bda02g00883 | 539 | SUPERFAMILY | WRKY DNA-binding domain | 233 | 292 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 346 | 375 | - | - | |
Bda02g00883 | 539 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 39 | 493 | IPR044810 | GO:0003700 | |
Bda02g00883 | 539 | ProSiteProfiles | WRKY domain profile. | 398 | 463 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | Pfam | WRKY DNA -binding domain | 405 | 460 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | Pfam | WRKY DNA -binding domain | 234 | 290 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 33 | 60 | - | - | |
Bda02g00883 | 539 | Gene3D | WRKY domain | 218 | 293 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | Gene3D | WRKY domain | 388 | 464 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 324 | 375 | - | - | |
Bda02g00883 | 539 | ProSiteProfiles | WRKY domain profile. | 234 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | PANTHER | WRKY TRANSCRIPTION FACTOR WRKY24-LIKE | 39 | 493 | - | - | |
Bda02g00883 | 539 | SUPERFAMILY | WRKY DNA-binding domain | 395 | 463 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 283 | 303 | - | - | |
Bda02g00883 | 539 | MobiDBLite | consensus disorder prediction | 324 | 345 | - | - | |
Bda02g00883 | 539 | SMART | WRKY_cls | 403 | 462 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00883 | 539 | SMART | WRKY_cls | 233 | 291 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00883 | Bda-Chr2:49193214 | Bda12g00951 | Bda-Chr12:40590110 | 2.44E-88 | dispersed | |
Bda02g00883 | Bda-Chr2:49193214 | Bda09g01561 | Bda-Chr9:47169033 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15591 | PF03106 | WRKY | 8.90E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00883 | K13424 | - | qsu:112000434 | 573.548 |