Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00925 | ATGTACAGCTCATTGAATACCCCTCCCGAGCTAACTAGTTGGAGAAGCAGTAGCGGCGATCCCTGTACAGAGTCATGGAAAGGGATAACTTGTGAGGGTTCAGCCGTTGTTTCTATCGATATTTCTGGGTTAGGACTCCATGGAACAATGGGATATTTGCTCTCCGTCCTACACTCGTTGAAGAAACTCGACATGAGTAGGAATAACATCCAGGGCGAAATCCCTTATCAGTTACCTCCAAATCTGACTTCCCTAAATGTTGCAGGCAATAACTTACGTGGGAATCTTCCTTATTCCCTCTCCAACATCGTTTCTCTTGATTATCTGTCTTTGTTTGAGTGCAGAGATCTTTCTTCCAACAAATTTTCAGGAGATCTTCCCTATTCCATCAGTTCATTGTCCAATCTTTCTTCACTATATTTGGAGAACAATCAGTTGACTGGTTCTCTTAATAGTCTCTCAACTCTACCTTTGACGAATCTAAACGTTGCAAACAACCATTTCAGTGGATGGGTACCTCAAGAGCTTTATTCAATCCCAAACTTTGTTTATGGTGGAAACTCATTTGAGACGGGTCCTGCGCCTCCTCCGCCGCCGTATAGCACACCACCTCCGGGAAGACCTCGCAGAAGTACACCACCCAAGGATTTTGATGCTGGATCATTTCAGCCAGATGGAGGCTTGGCAATTGGAGCAATAGTAGGCATCATTGTCGGGACTGTGGTCGTTTCTCTCATTCTTCTAGTTGTGTTTGCCATTTGTGTTAGAAAGAATAAAAAGCAAAAAACCAGACCTAGGTCTTCCAGTGGGCAATTCCCCGTGGGTTTGGGGTCAAACAATGGTAGATTTCTTTTCTTCTCTGTAATACCCATGTTTCAACGTTCTTCTCTGTTTCTCATTTCTCATGTTTTAGCAGTAACTGCCGTCGCAGAAGAGCAGAGGATAAAGAGTGTGGCAGCTGTCGTAGATCGGAAGTCAACTCCAGCAGAAAACCCGGCATTAGAAAGTTTACATGGGAAAAATGGATCTGTTAAGAGAATAAAGTCTCCGATTACTGCCACTTCCTACACTTTTGCTTCTCTCCAAACAGCAACAAATAGCTTTAGCCAAGAACATCTGGTCGGTGAAGGTTCCCTCGGTCGGGTTTACAGAGCCGACTTCCCAAATGGAAAGACGATGGCGATAAAAAAGGTGGACAGTGCTGCTCTACCGTTACGGGAGGAAGACAATTTTCTTCAACTTGTCTCGAATATGTCTAGATTGAGGCATCCCAACATTGTCACCCTCGTCGGATATTGTGCAGAGCAGGGACAGCGTCTTCTAGTGTATGAATATCTTGGAAATGGTAGTAGTCTTCATGAAATGCTTCACTACACTGAAGATGGCTGGAAGACCCTCAGTTGGAATTCACGGGTTAGAGTCGCCATTGGCAGCGCACGAGCTCTCGAGTATTTGCACGAGGTGTGCTTACCAAGTATCGTGCATAGAAATTTCAAGTCAGCTAACATATTGCTTGACGAAGAGATGAATCCCCACTTGTCGGATTGTGGCTTGGCTGCTCTAGCACCCAACACAGAGCGGCAAATAACAACGCAGCTGGTTGGATCGTTTGGTTACAGTGCTCCGGAATTCGCATTGTCCGGACTATACACCGTCAAGAGTGATGTGTACAGCTTCGGGGTGGTGATGTTAGAGCTACTCACCGGTCGGAAACCTCTTGATAGTTCGAGAACGAGATCGGAACACTCCCTCGTGGGATGGGCCACTCCTCAACTTCATGATATAGATGCCTTGGCAAAAATGGTAGATCCTGCTCTCAATGGGATGTACCCTGCAAAGTCTCTCTCTCGTTTTGCAGACATTATTGCCCTCTGCATCAAGCCGGAGCCAGAACCTCGCCCTCCCATGTCGGAAGTAGTCCAGGCATTGGTACGGTTAGTTCAACGGTCCAGTTTGGTCAAAAGGCGTCCCAGCGATGAATCCAGTTTCGCGTGGAAGACCATAGATCAGGAGGCCATAGACGCATCGTTCTGA | 2034 | 46.36 | MYSSLNTPPELTSWRSSSGDPCTESWKGITCEGSAVVSIDISGLGLHGTMGYLLSVLHSLKKLDMSRNNIQGEIPYQLPPNLTSLNVAGNNLRGNLPYSLSNIVSLDYLSLFECRDLSSNKFSGDLPYSISSLSNLSSLYLENNQLTGSLNSLSTLPLTNLNVANNHFSGWVPQELYSIPNFVYGGNSFETGPAPPPPPYSTPPPGRPRRSTPPKDFDAGSFQPDGGLAIGAIVGIIVGTVVVSLILLVVFAICVRKNKKQKTRPRSSSGQFPVGLGSNNGRFLFFSVIPMFQRSSLFLISHVLAVTAVAEEQRIKSVAAVVDRKSTPAENPALESLHGKNGSVKRIKSPITATSYTFASLQTATNSFSQEHLVGEGSLGRVYRADFPNGKTMAIKKVDSAALPLREEDNFLQLVSNMSRLRHPNIVTLVGYCAEQGQRLLVYEYLGNGSSLHEMLHYTEDGWKTLSWNSRVRVAIGSARALEYLHEVCLPSIVHRNFKSANILLDEEMNPHLSDCGLAALAPNTERQITTQLVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLTGRKPLDSSRTRSEHSLVGWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCIKPEPEPRPPMSEVVQALVRLVQRSSLVKRRPSDESSFAWKTIDQEAIDASF | 677 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 49467885 | 49470739 | - | Bda006370.1 | Bda02g00925 | 3220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00925 | 677 | SUPERFAMILY | L domain-like | 11 | 181 | - | - | |
Bda02g00925 | 677 | ProSiteProfiles | Protein kinase domain profile. | 368 | 646 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00925 | 677 | MobiDBLite | consensus disorder prediction | 188 | 218 | - | - | |
Bda02g00925 | 677 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 670 | - | - | |
Bda02g00925 | 677 | MobiDBLite | consensus disorder prediction | 191 | 210 | - | - | |
Bda02g00925 | 677 | PANTHER | OS01G0253100 PROTEIN | 1 | 672 | IPR045271 | GO:0004714|GO:0006468 | |
Bda02g00925 | 677 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 | 1 | 672 | - | - | |
Bda02g00925 | 677 | ProSiteProfiles | Leucine-rich repeat profile. | 135 | 157 | IPR001611 | GO:0005515 | |
Bda02g00925 | 677 | Gene3D | Ribonuclease Inhibitor | 1 | 195 | IPR032675 | - | |
Bda02g00925 | 677 | CDD | STKc_IRAK | 374 | 646 | - | - | |
Bda02g00925 | 677 | Pfam | Leucine rich repeat N-terminal domain | 2 | 31 | IPR013210 | - | |
Bda02g00925 | 677 | SUPERFAMILY | Protein kinase-like (PK-like) | 347 | 643 | IPR011009 | - | |
Bda02g00925 | 677 | Pfam | Protein kinase domain | 369 | 641 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda02g00925 | 677 | Gene3D | Phosphorylase Kinase; domain 1 | 333 | 445 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00925 | Bda-Chr2:49467885 | Bda13g00653 | Bda-Chr13:7491609 | 6.03E-126 | dispersed | |
Bda02g00925 | Bda-Chr2:49467885 | Bda09g01596 | Bda-Chr9:47377168 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69518 | PF00069 | Pkinase | 1.40E-40 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00925 | - | - | tcc:18597218 | 852.047 |