Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda02g00925 ATGTACAGCTCATTGAATACCCCTCCCGAGCTAACTAGTTGGAGAAGCAGTAGCGGCGATCCCTGTACAGAGTCATGGAAAGGGATAACTTGTGAGGGTTCAGCCGTTGTTTCTATCGATATTTCTGGGTTAGGACTCCATGGAACAATGGGATATTTGCTCTCCGTCCTACACTCGTTGAAGAAACTCGACATGAGTAGGAATAACATCCAGGGCGAAATCCCTTATCAGTTACCTCCAAATCTGACTTCCCTAAATGTTGCAGGCAATAACTTACGTGGGAATCTTCCTTATTCCCTCTCCAACATCGTTTCTCTTGATTATCTGTCTTTGTTTGAGTGCAGAGATCTTTCTTCCAACAAATTTTCAGGAGATCTTCCCTATTCCATCAGTTCATTGTCCAATCTTTCTTCACTATATTTGGAGAACAATCAGTTGACTGGTTCTCTTAATAGTCTCTCAACTCTACCTTTGACGAATCTAAACGTTGCAAACAACCATTTCAGTGGATGGGTACCTCAAGAGCTTTATTCAATCCCAAACTTTGTTTATGGTGGAAACTCATTTGAGACGGGTCCTGCGCCTCCTCCGCCGCCGTATAGCACACCACCTCCGGGAAGACCTCGCAGAAGTACACCACCCAAGGATTTTGATGCTGGATCATTTCAGCCAGATGGAGGCTTGGCAATTGGAGCAATAGTAGGCATCATTGTCGGGACTGTGGTCGTTTCTCTCATTCTTCTAGTTGTGTTTGCCATTTGTGTTAGAAAGAATAAAAAGCAAAAAACCAGACCTAGGTCTTCCAGTGGGCAATTCCCCGTGGGTTTGGGGTCAAACAATGGTAGATTTCTTTTCTTCTCTGTAATACCCATGTTTCAACGTTCTTCTCTGTTTCTCATTTCTCATGTTTTAGCAGTAACTGCCGTCGCAGAAGAGCAGAGGATAAAGAGTGTGGCAGCTGTCGTAGATCGGAAGTCAACTCCAGCAGAAAACCCGGCATTAGAAAGTTTACATGGGAAAAATGGATCTGTTAAGAGAATAAAGTCTCCGATTACTGCCACTTCCTACACTTTTGCTTCTCTCCAAACAGCAACAAATAGCTTTAGCCAAGAACATCTGGTCGGTGAAGGTTCCCTCGGTCGGGTTTACAGAGCCGACTTCCCAAATGGAAAGACGATGGCGATAAAAAAGGTGGACAGTGCTGCTCTACCGTTACGGGAGGAAGACAATTTTCTTCAACTTGTCTCGAATATGTCTAGATTGAGGCATCCCAACATTGTCACCCTCGTCGGATATTGTGCAGAGCAGGGACAGCGTCTTCTAGTGTATGAATATCTTGGAAATGGTAGTAGTCTTCATGAAATGCTTCACTACACTGAAGATGGCTGGAAGACCCTCAGTTGGAATTCACGGGTTAGAGTCGCCATTGGCAGCGCACGAGCTCTCGAGTATTTGCACGAGGTGTGCTTACCAAGTATCGTGCATAGAAATTTCAAGTCAGCTAACATATTGCTTGACGAAGAGATGAATCCCCACTTGTCGGATTGTGGCTTGGCTGCTCTAGCACCCAACACAGAGCGGCAAATAACAACGCAGCTGGTTGGATCGTTTGGTTACAGTGCTCCGGAATTCGCATTGTCCGGACTATACACCGTCAAGAGTGATGTGTACAGCTTCGGGGTGGTGATGTTAGAGCTACTCACCGGTCGGAAACCTCTTGATAGTTCGAGAACGAGATCGGAACACTCCCTCGTGGGATGGGCCACTCCTCAACTTCATGATATAGATGCCTTGGCAAAAATGGTAGATCCTGCTCTCAATGGGATGTACCCTGCAAAGTCTCTCTCTCGTTTTGCAGACATTATTGCCCTCTGCATCAAGCCGGAGCCAGAACCTCGCCCTCCCATGTCGGAAGTAGTCCAGGCATTGGTACGGTTAGTTCAACGGTCCAGTTTGGTCAAAAGGCGTCCCAGCGATGAATCCAGTTTCGCGTGGAAGACCATAGATCAGGAGGCCATAGACGCATCGTTCTGA 2034 46.36 MYSSLNTPPELTSWRSSSGDPCTESWKGITCEGSAVVSIDISGLGLHGTMGYLLSVLHSLKKLDMSRNNIQGEIPYQLPPNLTSLNVAGNNLRGNLPYSLSNIVSLDYLSLFECRDLSSNKFSGDLPYSISSLSNLSSLYLENNQLTGSLNSLSTLPLTNLNVANNHFSGWVPQELYSIPNFVYGGNSFETGPAPPPPPYSTPPPGRPRRSTPPKDFDAGSFQPDGGLAIGAIVGIIVGTVVVSLILLVVFAICVRKNKKQKTRPRSSSGQFPVGLGSNNGRFLFFSVIPMFQRSSLFLISHVLAVTAVAEEQRIKSVAAVVDRKSTPAENPALESLHGKNGSVKRIKSPITATSYTFASLQTATNSFSQEHLVGEGSLGRVYRADFPNGKTMAIKKVDSAALPLREEDNFLQLVSNMSRLRHPNIVTLVGYCAEQGQRLLVYEYLGNGSSLHEMLHYTEDGWKTLSWNSRVRVAIGSARALEYLHEVCLPSIVHRNFKSANILLDEEMNPHLSDCGLAALAPNTERQITTQLVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLTGRKPLDSSRTRSEHSLVGWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCIKPEPEPRPPMSEVVQALVRLVQRSSLVKRRPSDESSFAWKTIDQEAIDASF 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 49467885 49470739 - Bda006370.1 Bda02g00925 3220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda02g00925 677 SUPERFAMILY L domain-like 11 181 - -
Bda02g00925 677 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00925 677 MobiDBLite consensus disorder prediction 188 218 - -
Bda02g00925 677 Gene3D Transferase(Phosphotransferase) domain 1 448 670 - -
Bda02g00925 677 MobiDBLite consensus disorder prediction 191 210 - -
Bda02g00925 677 PANTHER OS01G0253100 PROTEIN 1 672 IPR045271 GO:0004714|GO:0006468
Bda02g00925 677 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 1 672 - -
Bda02g00925 677 ProSiteProfiles Leucine-rich repeat profile. 135 157 IPR001611 GO:0005515
Bda02g00925 677 Gene3D Ribonuclease Inhibitor 1 195 IPR032675 -
Bda02g00925 677 CDD STKc_IRAK 374 646 - -
Bda02g00925 677 Pfam Leucine rich repeat N-terminal domain 2 31 IPR013210 -
Bda02g00925 677 SUPERFAMILY Protein kinase-like (PK-like) 347 643 IPR011009 -
Bda02g00925 677 Pfam Protein kinase domain 369 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda02g00925 677 Gene3D Phosphorylase Kinase; domain 1 333 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00925 Bda-Chr2:49467885 Bda13g00653 Bda-Chr13:7491609 6.03E-126 dispersed
Bda02g00925 Bda-Chr2:49467885 Bda09g01596 Bda-Chr9:47377168 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69518 PF00069 Pkinase 1.40E-40 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda02g00925 - - tcc:18597218 852.047