Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda02g00927 | ATGTTTGGCGACTTCCATTTTCCTATTAAACTCCGTCTCCCACGAGAACAAGCTCACCCGCCTTCGGATGATAATCGGATGGTTGTCGATGAGCACGACTTCTTCTCCGTTAAGACAAGCGTCGCTGAACACCACGAACCACGTGGTAATTCTTGCAAACCCACCGGAGTTACCGTGAAAAGAGAACAGTGCAACTTTGAGCCGCCGCGGTCCGACTTGGCTGTAAATACTGGATTGCACCTGCTAATTGCCAACACTGGAAGCGATCAGTCAGCGGTGGACGATGGGATCTCATCGGAAGGCGGTCATGTCCACGAGCAAGATAAGAATGAGCTGCTTCAATTGCAAGGGGAACTTGGTCGAATGAACGAGGAGAATTATAAATTGAGAGAAATGCTCACCCAGCTCAACAACGACTACAATGCTCTGCAGATGCATCTTTTGGCGGTAAGGCAACAGCAACAAACCAATCACCCATCTGCAATTACTCAACTACAGGCAACAACAAATAATTTGCTTATTCTCAAACTATATGGGTTTCAATTATTCACAAGCCAACATGTTCTGGTGGGAAGAGGGATGGTGCAAAAGCAGTTCATGGATCTTGGACCCAGTGCGGTGGATGATCAAATATCCCAGTCTTCATCTGATGAAAGAACAGTTTCTGGGTCGTCTTTGAATCAAGCAGACGGTGGCGGGTTAAAGAAAACCATAAATGATATTAATTCATTAGATAAGGAACAGTCTAATGTGAGGGCTGAGAAAAGAAGGGAAGACGGCCCTGACTCAGATGGTAATGGTCCTAGTAAATCGAACTCTGTCAAACCTCTTGACCACCCGACGACGACGGAGGCCACCATGAGGAAAGCCCGCGTCTCTGTTCGAGCTCGATCAGAAGCGCCAATGATCAACGACGGATGCCAATGGAGAAAGTATGGGCAAAAGATGGCCAAAGGAAACCCATGTCCTCGGGCTTATTATAGATGCACCATGGCAGTTGGATGTCCAGTTCGCAAACAAGTTCAACGATGCGCTGAAGATCGAACAATTTTGATAACTACGTATGAAGGGAAACATAATCACCCTCTCCCACCAGCTGCTGTCGCTTTGGCTTCCACCACAACTGCCGCTGCTACCATGCTATTATCTGGGTCGATCCCAAGCGCAGATGGCTTAATGAACCAGAATTTGCTGGCAAGGGCCATTCTTCCTTGCTCATCAAACATGGCAACAATTTCAGCTTCTGCTCCATTTCCGACTGTCACCTTGGACCTCACTCACACACCAAACAACCCATTGCATGAATTCGAAAGACCTCCCACCACCCAGATCCATCTCCCATTTCTGGGTCATCCCCATCAGCTTCCTCCTCAGGTTTTTGGTCAAACGCTGTATAATCAATCAAAGCTCTCGGGTCTTCAGCTCTCCGGCCATGGAATCGGTTCTTCTCATTTATTCCAGCAAGCTCTACCGCCTTTATTGCACCAGGCTCACCCACCATCTTCGTTTCCCGACTCATTGAGTGCTGCCACTGCTGCCATCGCCTCTGATCCTAACTTCACCGCCGCTCTTGCCGCGGCCATAAGCTCCATCATCGGCGGCGCTCCGTCGAACACTGAAAACGCCAATGTCTCTCCAAGCAATAACAACATTAACAAAGTGAATAGTTAG | 1671 | 48.29 | MFGDFHFPIKLRLPREQAHPPSDDNRMVVDEHDFFSVKTSVAEHHEPRGNSCKPTGVTVKREQCNFEPPRSDLAVNTGLHLLIANTGSDQSAVDDGISSEGGHVHEQDKNELLQLQGELGRMNEENYKLREMLTQLNNDYNALQMHLLAVRQQQQTNHPSAITQLQATTNNLLILKLYGFQLFTSQHVLVGRGMVQKQFMDLGPSAVDDQISQSSSDERTVSGSSLNQADGGGLKKTINDINSLDKEQSNVRAEKRREDGPDSDGNGPSKSNSVKPLDHPTTTEATMRKARVSVRARSEAPMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGKHNHPLPPAAVALASTTTAAATMLLSGSIPSADGLMNQNLLARAILPCSSNMATISASAPFPTVTLDLTHTPNNPLHEFERPPTTQIHLPFLGHPHQLPPQVFGQTLYNQSKLSGLQLSGHGIGSSHLFQQALPPLLHQAHPPSSFPDSLSAATAAIASDPNFTAALAAAISSIIGGAPSNTENANVSPSNNNINKVNS | 556 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 49474415 | 49476479 | - | Bda006372.1 | Bda02g00927 | 3222 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda02g00927 | 556 | SUPERFAMILY | WRKY DNA-binding domain | 296 | 364 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00927 | 556 | Pfam | WRKY DNA -binding domain | 304 | 362 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00927 | 556 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 5 | 542 | IPR044810 | GO:0003700 | |
Bda02g00927 | 556 | MobiDBLite | consensus disorder prediction | 265 | 280 | - | - | |
Bda02g00927 | 556 | Gene3D | WRKY domain | 288 | 365 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00927 | 556 | SMART | WRKY_cls | 303 | 363 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00927 | 556 | MobiDBLite | consensus disorder prediction | 247 | 264 | - | - | |
Bda02g00927 | 556 | MobiDBLite | consensus disorder prediction | 206 | 290 | - | - | |
Bda02g00927 | 556 | Coils | Coil | 105 | 139 | - | - | |
Bda02g00927 | 556 | ProSiteProfiles | WRKY domain profile. | 298 | 364 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda02g00927 | 556 | PANTHER | WRKY TRANSCRIPTION FACTOR 6 | 5 | 542 | - | - | |
Bda02g00927 | 556 | MobiDBLite | consensus disorder prediction | 207 | 232 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00927 | Bda-Chr2:49474415 | Bda15g00953 | Bda-Chr15:17560389 | 1.78E-137 | dispersed | |
Bda02g00927 | Bda-Chr2:49474415 | Bda15g00959 | Bda-Chr15:17679033 | 1.29E-138 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15597 | PF03106 | WRKY | 5.20E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda02g00927 | - | - | tcc:18597191 | 495.738 |