Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00027 ATGTCTCTAGTAAGATCTGCAGAGTCATCTATTGTGTCGTATGGAAGTTCCAAGTTTTACCCGATGAAGGGGAGTAGTATTTCTTTGAGCCTATCCACCGAAACACTTGCCTCCGACGAACAAAAGGCAATGTACAGCAGTGAGAGTTATGAGAACTATCTGCTCGATTCTCCAATCGAAGAACATATTCAAGCACCATACTCCACGATTTATAGCCCAACGTTTCATCCACAAGTTGGTTCTTGCCAGCGACGAGCTGAATACCCGTTTGACCCTTCAGCGCCGGTTGATTTTGAAGAAGATCAGATGAGATTGAAGTTACAAGAATTGGAGAGAGCACTGCTTGGTGACAAAGAGTACACCTCACTCGTGCCTAATCCGAAGCAATTGCTTTTAGATTGTGCTGCTAAGCTCTCAGAAGGAAACAATGAAGAGGCATCAGCAAAGATTAGTCAGCTGCGCCAGATGGTTTCGATTCAAGGAGATCCTCATCAGAGAATTGCTGCTTACATGGTAGAAGGTCTCGTTGCTCGAACGGCAGACTCGGGAAAGTTTCTTTATAAAGCTTTGAAGTGCAAAGAGGCTCCATCCTCAGACAGGCTTGCAGCCATGCAGATTCTTTTCGAGGTTTGCCCGTGCTTTAAATTTGGATTTATGACTGCCAACTTTTCAATCTTAGAGGCATGCAAAAATGAGAAAAGAGTTCATATAATAGACTTCGACATAAACCAAGGGACTCCATACATAGCATTGATTCAGATGCTAAAGACTCTGCCAGGCAATCCACCTCACTTGAGGTTAACAGGGGTCGACGATCCCGACACAGTTAAACAGCCTATTGGAGGCCTTAAAAACATAGGACTAAGGCTCGAAATGCTGGCAAAAACACTGGGTGTTTCGTTCGAGTTTCGAGCCGTGGCCTCAAAGACTTCAATCGTGTCTCCATCGATGCTAGACTGCCAACCTGGAGAAGCACTCATTGTAAATTTTGTATTTCAACTTCACCACATGCCAGATGAAACCGTTTCAACGACAAACATGCGAGACCAGCTTCTCCGCATGGTTAAAAGCTTAAAGCCAAAACTAGTAACGATAGTAGAACAAGACGTGAACACAAACACTAACCCATTTTTGATGAGATTCATTGAAGCTTACAATTATTATTCAGCTGTATTTGAGTCTCTTGATGTAACTCTTCCCAGAAACAGTCAAGACAGGATGAACGTAGAGAGGCAGTGTCTTGCAAGGGACATAGTTAATATTGTGGCGTGTGAAGGGGAGGAAAGAATCAAGCGGTATGAAGTTGCTGGAAAATGGAGGGCAAGAATGACAATGGCCGGGTTTACCTCTTATGCGATCAGACCGAGTGTGCTCGAATCGATAGAGAAGCTCGTGAGGGAATATTGTGAGAGGTTCAAAGCGAAGCAGGAGAGGGGCGCACTTCATTTTGGGTGGGAGGACAAGAACTTGATTGTCGCCTCTGCTTGGAAATGA 1494 44.44 MSLVRSAESSIVSYGSSKFYPMKGSSISLSLSTETLASDEQKAMYSSESYENYLLDSPIEEHIQAPYSTIYSPTFHPQVGSCQRRAEYPFDPSAPVDFEEDQMRLKLQELERALLGDKEYTSLVPNPKQLLLDCAAKLSEGNNEEASAKISQLRQMVSIQGDPHQRIAAYMVEGLVARTADSGKFLYKALKCKEAPSSDRLAAMQILFEVCPCFKFGFMTANFSILEACKNEKRVHIIDFDINQGTPYIALIQMLKTLPGNPPHLRLTGVDDPDTVKQPIGGLKNIGLRLEMLAKTLGVSFEFRAVASKTSIVSPSMLDCQPGEALIVNFVFQLHHMPDETVSTTNMRDQLLRMVKSLKPKLVTIVEQDVNTNTNPFLMRFIEAYNYYSAVFESLDVTLPRNSQDRMNVERQCLARDIVNIVACEGEERIKRYEVAGKWRARMTMAGFTSYAIRPSVLESIEKLVREYCERFKAKQERGALHFGWEDKNLIVASAWK 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 453384 454990 + Bda015960.2 Bda03g00027 3286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00027 497 Pfam GRAS domain family 128 497 IPR005202 -
Bda03g00027 497 ProSiteProfiles GRAS family profile. 118 497 IPR005202 -
Bda03g00027 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 496 IPR005202 -
Bda03g00027 497 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 117 496 IPR030011 GO:0003700|GO:0005634
Bda03g00027 497 Coils Coil 136 156 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00689 Bda03g00027 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00027 Bda-Chr3:453384 Bda07g00332 Bda-Chr7:4419946 1.39E-139 dispersed
Bda13g01541 Bda-Chr13:38644026 Bda03g00027 Bda-Chr3:453384 5.04E-44 transposed
Bda01g00689 Bda-Chr1:34048835 Bda03g00027 Bda-Chr3:453384 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15599 PF03514 GRAS 5.00E-130 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00027 - - cit:102611655 651.358