Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00084 ATGGGAAAGGAAGATCACGTCGGCGATCCTCAGAAGAAAATGATAATAGCTCTCATTATTCTCTGTGCTTCCCTAGTTGCTTCCTTGTTTTTCCTCTTATCTCTCTGGTTATATCGACGAAACTGCTCTCTACAATCGGCGAAGAGACATGTCCAGAGCTCAGACGCTGAGAAAGGTCTCAGATTAGCGCCATTTTTGGGTAAATTCAATTCGGTGAAAATGGTAGGGAAGAAGGGATCGGTTTCGGTGATTGATTATAAACTATTAGAGAAAGCTACAAACAATTTTCGCGAGAGTAATGTGTTGGGAGAGGGTGGATTTGGTCGTGTTTACAAGGCTCGATTGGATGAAACCTTGCTTGTTGCCGTCAAGAAGCTAGACTGCAGTGGCGTAGATGCTGAGAGAGAATTTGAGAACGAATTGAATTTGTTGAGCAAAATCCAGCACCCAAATATTATTGCCCTTTTGGGGTATGGTTTTCATGGTGAGTCGAAGCTTTTTGTCTATGAATTAATGGAGAATGGATCTCTGGAAACTCAACTGCATGGACCTTCCCACGGTTCGTCTTTATCGTGGTATGTTCGGATGAAGATTGCCCTCGATGCTGCAAGAGGATTAGAGTTTCTCCACGAGCACTGCCTTCCAGCAGTCATTCACAGAGATCTAAAATCTTCCAATATTCTGTTAGATGCCAACTTTAATGCCAAACTTTCTGATTTTGGCCTCGCTGTAACTGATGGTTCTCAAAACAAAAATACAATCAAGCTCTCCGGGACCTTAGGATATGTAGCTCCAGAGTATTTATTAGATGGTAAATTGACGGATAAAAGCGATGTATATGCATTCGGGATTGTTCTGCTGGAGCTGTTACTAGGGAGAAAGCCGGTGGAAAAACTGTCCCCATCTCAGTGCCAATCGATTGTGACATGGGTTTGCCTTGTTCCTATGTCGCATTATCTTGCTATATTATAA 972 42.59 MGKEDHVGDPQKKMIIALIILCASLVASLFFLLSLWLYRRNCSLQSAKRHVQSSDAEKGLRLAPFLGKFNSVKMVGKKGSVSVIDYKLLEKATNNFRESNVLGEGGFGRVYKARLDETLLVAVKKLDCSGVDAEREFENELNLLSKIQHPNIIALLGYGFHGESKLFVYELMENGSLETQLHGPSHGSSLSWYVRMKIALDAARGLEFLHEHCLPAVIHRDLKSSNILLDANFNAKLSDFGLAVTDGSQNKNTIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGIVLLELLLGRKPVEKLSPSQCQSIVTWVCLVPMSHYLAIL 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 844291 846215 + Bda016022.1 Bda03g00084 3343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00084 323 Gene3D Transferase(Phosphotransferase) domain 1 172 320 - -
Bda03g00084 323 Pfam Protein tyrosine and serine/threonine kinase 99 305 IPR001245 GO:0004672|GO:0006468
Bda03g00084 323 ProSiteProfiles Protein kinase domain profile. 96 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00084 323 Gene3D Phosphorylase Kinase; domain 1 65 171 - -
Bda03g00084 323 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Bda03g00084 323 SUPERFAMILY Protein kinase-like (PK-like) 75 317 IPR011009 -
Bda03g00084 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bda03g00084 323 PANTHER BNAA04G14780D PROTEIN 9 311 - -
Bda03g00084 323 PANTHER OS01G0750732 PROTEIN 9 311 - -
Bda03g00084 323 SMART serkin_6 96 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00084 Bda-Chr3:844291 Bda04g00805 Bda-Chr4:57892437 4.51E-124 dispersed
Bda01g00757 Bda-Chr1:34821946 Bda03g00084 Bda-Chr3:844291 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69520 PF07714 PK_Tyr_Ser-Thr 3.90E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00084 - - pper:18792292 454.136