Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00096 ATGGCATTATTACGCAAGCTATTTTACCGGAACCCGCCGGACGGTCTATTGGAGATCTCTGAAAGGGTCTATGTTTTCAATTGCTGCTATTCCACTGATGTTTTGGAAGAAGAAGAATATAAAGCCTATATAGGAGCCACAGTGGGTCAACTCCGTGAGCATCTCCCTGATGCTTCTTTCATGGTATTCAACTTCCGAGAGGGGGAGAACCAAAGTCATTTAGCAAATATTCTAGCCGAGCACAACATGATTGTAATGGACTATCCTCGACATTACGAAGGCTGCCCTCTTCTGTCTATGGAGATGATCCATCATTTCTTGAGATCGAGTGAAAGTTGGCTATCACTTGGACAACAAAATGTGCTTTTGATGCATTGCGAGCGAGGTGGGTGGCCTGTTTTGGCCTTTATGTTGGCTTCACTCTTGATATATAGGAAGCAGTACAGTGGGGAACAGAAAACTCTTGACATGGTTTACAGGCAAGCACCTAAAGAACTTTTACAGTTGATGACACCTGTTAACCCATTGCCTTCACAGTTGAGGTACCTTCAATATGTATCGAGAAGAAATGTCTCTACAGAATGGCCTCCATCAGATAGGGCGCTTACTTTGGACTGCATCATTATACGATTTATTCCTAATTTGGACGGTGATGGTGGTTTCAGACCAATTTTTAGAATATATGGGCAGGATCCACTTATGGCTAACGATAGGATTCCTAAAGTTTTGTTCTCAACACCAAAAAGAAGCAAACTCATTCGGTATTTTAAACAGGCAGACTGTGAGCTTGCCAAAATTGATATCCGTTGCCATATCCAAGGAGACGTTGTTCTTGAATGTATAAATTTGGACGAGGATTTGGAACGCGAGGAGATGATATTTCGTGTTATGTTTAATACGGCCTTCATAAGGTCAAACATTTTGATGCTTGGACGGAATGAGATTGATAGTTTATGGAACGCCAAGGATCAGTTTCCTAAGGATTTTAGAACCGAGCTTCATGTAATGTTTTGGAATTTTTTCTCATATGTAATGCTTAAAGGTATATTGGGTTATCTAATTGAACTGAGGAGAGCATATAACTGTGAGATCATGCTCTCAAAGGTCAAAATTCCTTTGCCTGATTTGATGGGATCAGTTCTTGCCATGGACGAGTCAGCTTTGAGTGTGGATCAGGTTGAGAACCTCATAAAGTTTTGTCCAACAAAAGAAGAGATGGAACTTCTCAAGGGGTACAGTGGAGATAAAGAAAACTTGGGAAAATGTGAAATTTTCTTTCTAGAATTGATGAAAGTACCACGCGTAGAGTCCAAGCTAAGAGTTTTTTCTTTTAAGATCCAGTTCCATAAAGGAGTGTATTCTTCTCATTTCACATCTCAATCCCTTATCTTAATTGTAAATGACCAGATCAGGGCTTCGCTCAAGTTGAGAAGAGTGATGCAGACCATTCTTTCTTTGGGTAATGCTTTAAACCAGGGAACTGCAAGAGGATCTGCTATTGGATTTCGACTCGATAGTCTTCTTAAGCTCGCTGATACACGAGCTCGTAACAGTAAGATGACTCTCGTGCATTATCTGTGCAAGGTGCTTGCTGAAAAGCTACCAGAACTTTCAGATTTTTCAAATGACCTTGTGAATTTGGAGGCTTCAACGAAGATACAATTGAAATACTTGGCTGAAGAAATGCAAGCCATAAGTAAGGGGCTTGAGAAGGTTGTCCAGGAATTGACTTCAGCAGAAAACGACGGACCCGTCTCTGAGTATTTTTGCGAGGCTTTAAAGAATTTCCTTTCTCATGCTGAGGCTGAAGTGAGGTCTCTTACCTCACTTTATTCTAATGTGGGTAGAAATGCAGATGCATTAGCGCTATATTTTGGAGAGGATCCATCCCGTTGCCCATTTGAACAAGTTGTATCTACCTTGTATAGCTTTGTCAAAACTTTTGAGCGAGCGCATGAGGAAAACTGCAAGCAGCTTGAATTTGAAAAGAAGAAAATGCAAAAAGAGACGGAAATGGAGAAGCTAAAGACCAGTTTTTCGAGGAACGTGTCTGAACGTTCTATACAGACGCTAATAAAAAGTGGTGACATCCATTACACGAGTTTCACCAGCAAAAGACCTATCTAG 2127 40.86 MALLRKLFYRNPPDGLLEISERVYVFNCCYSTDVLEEEEYKAYIGATVGQLREHLPDASFMVFNFREGENQSHLANILAEHNMIVMDYPRHYEGCPLLSMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLASLLIYRKQYSGEQKTLDMVYRQAPKELLQLMTPVNPLPSQLRYLQYVSRRNVSTEWPPSDRALTLDCIIIRFIPNLDGDGGFRPIFRIYGQDPLMANDRIPKVLFSTPKRSKLIRYFKQADCELAKIDIRCHIQGDVVLECINLDEDLEREEMIFRVMFNTAFIRSNILMLGRNEIDSLWNAKDQFPKDFRTELHVMFWNFFSYVMLKGILGYLIELRRAYNCEIMLSKVKIPLPDLMGSVLAMDESALSVDQVENLIKFCPTKEEMELLKGYSGDKENLGKCEIFFLELMKVPRVESKLRVFSFKIQFHKGVYSSHFTSQSLILIVNDQIRASLKLRRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLADTRARNSKMTLVHYLCKVLAEKLPELSDFSNDLVNLEASTKIQLKYLAEEMQAISKGLEKVVQELTSAENDGPVSEYFCEALKNFLSHAEAEVRSLTSLYSNVGRNADALALYFGEDPSRCPFEQVVSTLYSFVKTFERAHEENCKQLEFEKKKMQKETEMEKLKTSFSRNVSERSIQTLIKSGDIHYTSFTSKRPI 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 902807 911218 - Bda016034.2 Bda03g00096 3355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00096 708 SMART it6_source 303 708 IPR015425 -
Bda03g00096 708 ProSiteProfiles Formin homology-2 (FH2) domain profile. 290 674 IPR015425 -
Bda03g00096 708 Gene3D - 196 337 - -
Bda03g00096 708 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 334 IPR035892 -
Bda03g00096 708 Coils Coil 649 669 - -
Bda03g00096 708 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Bda03g00096 708 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Bda03g00096 708 SUPERFAMILY Formin homology 2 domain (FH2 domain) 352 677 - -
Bda03g00096 708 Gene3D Protein tyrosine phosphatase superfamily 11 191 IPR029021 -
Bda03g00096 708 Gene3D Formin, FH2 domain 352 680 IPR042201 -
Bda03g00096 708 PANTHER FORMIN-J 357 682 - -
Bda03g00096 708 PANTHER FORMIN-J 1 337 - -
Bda03g00096 708 SMART PTEN_C2_2 197 337 IPR014020 -
Bda03g00096 708 Pfam Formin Homology 2 Domain 353 648 IPR015425 -
Bda03g00096 708 Pfam C2 domain of PTEN tumour-suppressor protein 199 334 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00096 Bda-Chr3:902807 Bda11g01706 Bda-Chr11:51303533 5.80E-50 dispersed
Bda03g00096 Bda-Chr3:902807 Bda14g00861 Bda-Chr14:6618208 4.29E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00096 - - zju:107419746 592.038