Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00105 | ATGGGTATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGAATACCTCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCAACAAGTGCTGAAGAGTGAAGCCTATGCTGCTGGAGATATTGGAACTTCTGTTCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTAGCTTTTTTGGGCGATAAAATAAACAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAGCCGAAACAGTAATAAAACTGCCCAAGTTGATGATTGGGCTCCTGAGGAGGGTCCACACTCTGATTTTACTGGCCCAAATTCAGGCAGCACAGCTTGTGTTGCAATCATCCAAAACAACCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAATGGTCAGGCTTACAATCTGTCTCGAGATCACAAACCAGATCTCGAGGTTGAGAAGGATAGAATTTTAAAAGCTGGTGGATTTATTCACGCCGGCCGAATCAATGGCAGTTTGAACCTTGCAAGAGCAATTGGTGATGCAGAATTCAAGCAAAATAAAATTTTACCCGTTGAAAGTCAGATTGTAACTGCAAATCCTGAAGTAATCACAGTTGAGCTCTGTGAAGACTGA | 798 | 42.36 | MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDANTSFFGVYDGHGGKVVAKFCSKYLHQQVLKSEAYAAGDIGTSVQKAFLRMDEMMQGQRGWRELAFLGDKINKFSGMIEGLIWSPRSRNSNKTAQVDDWAPEEGPHSDFTGPNSGSTACVAIIQNNRLVVANAGDSRCVLSRNGQAYNLSRDHKPDLEVEKDRILKAGGFIHAGRINGSLNLARAIGDAEFKQNKILPVESQIVTANPEVITVELCED | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 950950 | 954549 | - | Bda016044.1 | Bda03g00105 | 3364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00105 | 265 | MobiDBLite | consensus disorder prediction | 139 | 158 | - | - | |
Bda03g00105 | 265 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 265 | IPR001932 | - | |
Bda03g00105 | 265 | SMART | PP2C_4 | 11 | 262 | IPR001932 | - | |
Bda03g00105 | 265 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Bda03g00105 | 265 | CDD | PP2Cc | 23 | 265 | IPR001932 | - | |
Bda03g00105 | 265 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 265 | - | - | |
Bda03g00105 | 265 | Pfam | Protein phosphatase 2C | 157 | 263 | IPR001932 | - | |
Bda03g00105 | 265 | Pfam | Protein phosphatase 2C | 23 | 103 | IPR001932 | - | |
Bda03g00105 | 265 | Gene3D | - | 1 | 265 | IPR036457 | - | |
Bda03g00105 | 265 | SUPERFAMILY | PP2C-like | 3 | 262 | IPR036457 | - | |
Bda03g00105 | 265 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 265 | IPR015655 | GO:0004722|GO:0006470 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00105 | Bda13g01275 | CCT | |
Bda01g01016 | Bda03g00105 | CCT | |
Bda03g00105 | Bda13g01275 | ECH | |
Bda01g01016 | Bda03g00105 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00105 | Bda-Chr3:950950 | Bda04g00787 | Bda-Chr4:57792619 | 4.30E-158 | dispersed | |
Bda01g01016 | Bda-Chr1:43708717 | Bda03g00105 | Bda-Chr3:950950 | 3.73E-161 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00105 | K17499 | - | zju:107419763 | 473.781 |