Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00105 ATGGGTATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGAATACCTCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCAACAAGTGCTGAAGAGTGAAGCCTATGCTGCTGGAGATATTGGAACTTCTGTTCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTAGCTTTTTTGGGCGATAAAATAAACAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAGCCGAAACAGTAATAAAACTGCCCAAGTTGATGATTGGGCTCCTGAGGAGGGTCCACACTCTGATTTTACTGGCCCAAATTCAGGCAGCACAGCTTGTGTTGCAATCATCCAAAACAACCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTATTATCAAGGAATGGTCAGGCTTACAATCTGTCTCGAGATCACAAACCAGATCTCGAGGTTGAGAAGGATAGAATTTTAAAAGCTGGTGGATTTATTCACGCCGGCCGAATCAATGGCAGTTTGAACCTTGCAAGAGCAATTGGTGATGCAGAATTCAAGCAAAATAAAATTTTACCCGTTGAAAGTCAGATTGTAACTGCAAATCCTGAAGTAATCACAGTTGAGCTCTGTGAAGACTGA 798 42.36 MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDANTSFFGVYDGHGGKVVAKFCSKYLHQQVLKSEAYAAGDIGTSVQKAFLRMDEMMQGQRGWRELAFLGDKINKFSGMIEGLIWSPRSRNSNKTAQVDDWAPEEGPHSDFTGPNSGSTACVAIIQNNRLVVANAGDSRCVLSRNGQAYNLSRDHKPDLEVEKDRILKAGGFIHAGRINGSLNLARAIGDAEFKQNKILPVESQIVTANPEVITVELCED 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 950950 954549 - Bda016044.1 Bda03g00105 3364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00105 265 MobiDBLite consensus disorder prediction 139 158 - -
Bda03g00105 265 ProSiteProfiles PPM-type phosphatase domain profile. 23 265 IPR001932 -
Bda03g00105 265 SMART PP2C_4 11 262 IPR001932 -
Bda03g00105 265 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bda03g00105 265 CDD PP2Cc 23 265 IPR001932 -
Bda03g00105 265 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 265 - -
Bda03g00105 265 Pfam Protein phosphatase 2C 157 263 IPR001932 -
Bda03g00105 265 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bda03g00105 265 Gene3D - 1 265 IPR036457 -
Bda03g00105 265 SUPERFAMILY PP2C-like 3 262 IPR036457 -
Bda03g00105 265 PANTHER PROTEIN PHOSPHATASE 2C 1 265 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00105 Bda13g01275 CCT
Bda01g01016 Bda03g00105 CCT
Bda03g00105 Bda13g01275 ECH
Bda01g01016 Bda03g00105 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00105 Bda-Chr3:950950 Bda04g00787 Bda-Chr4:57792619 4.30E-158 dispersed
Bda01g01016 Bda-Chr1:43708717 Bda03g00105 Bda-Chr3:950950 3.73E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00105 K17499 - zju:107419763 473.781