Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00106 ATGCAGGCAGATCATTCGGTGGTAAGCTTGAGACCAGGTGGCGGCAGTGGCTTTCGTGGCTCTAAATTCTTCACTCCTCGATTCCAATCTTCTTCCTCCGGTGCTCCTACCTTGCATCCTCATGGCGGCGCCGCACCTGCCCTCAAGAGTGGAGACTTACGTTTTGAAGGACAGGAGCGTGTCATGTACACCCGAGATCAGCTGCTGCAACTTAGAGAGTTTAAAACTGTTTCTGAAGATATTTTGAAGATAAAACAAGAAATTGATGCGGAGTTTTTGGTGGAGGATCAATCTTGGGCTCGTGCAAATGCAGATAACAATCAGCGACTTCCACCCCAAGGTCCTTTTTCTGATCTGGATTACCGTGATTGGCGTGGTCGGTCTTCACAGTTGCCTGCCTCTGGAGAGGAGAGATCTTGGAATGACAATAAGGAGCTAATGTCTCGAGATATTAATGGTCAACAAGATCAATTAAATATTCAGTTTACTGTGGCACTAATTTCTAGTCAAGCGGTAGGTCCTGCGCCAGCTCTTGTGAAGGCTGAAGTTCCATGGTCAGTGCGTAGAGGAAATCTCTCTGAGAGGGAACGTATCTTGAAAGCAGTGAAAGGCATTCTTAATAAATTGACCCCAGAGAAGTTTGACGTCCTTAAAGGTCAGCTGATTAACTCTGGAATAACAACCCCTGATATTCTTAAGGGTGTTATCTCGCTTATATTTGACAAAGCTGTGCTGGAACCAACATTTTGTCCCATGTATGCACTTTTATGCTCTGATCTTAATGACAAGCTTCCTCCATTCCCATCTGATGAGCCTGGTGGGAAGGATATCACTTTTAAACGAGTACTGTTGGATATTTGTCAAGAGGCATTTGAAAATGCTGACAATCTAAGGGCAGAAATTAGGCAGATGGCTGATCCTAAGCTAGATGCTGAACGTAGAGAAAAGGAAAGAATGGTTAAACTGCGTACTCTTGGAAACATTCGCCTCATAGGTGAACTATTGAAGCAGAAGATGGTGTCTGAAAAAATTGTCCACCACATTGTTCAGGAGCTTTTGGGATCTGAAGGTAAAGTGTGTCCCGCCGAGGAGAATGTTGAGGCTATATGTCAATTTTTTAGCACCATTGGTAAGCAGCTGGATGAGGGTCCAAAATCTCGAAGAGTCAATGATATCTATTTTAGCAGGTTGAAGGAGCTGACTGCAAACATTCAACTTGCGCCTAGATTGAGATTTATGGTCCGTAATGTTGTTGATTTGCGGGCTAACAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCAAAGACGATCACCGAAATCCATTCAGAAGCGGAAAAGAATCTAGGGTTGCGTCCTGGTTCTACTGCTATCATGAGAAATGGTCGTAATGCTGCAGTCATTGGGGGAATGATGCCTGGGAGACCTGGCTCTGGTGGTTTAATGCCTGGAATGCCTGGGACCAGAAGGATGCCTGGTATGCCTGGGTTTGATGATGATAATTGGGAGGTTCCTCGATCTCGATCGAAAGCAAGAAATGATGGTCCTATACAATCTGTTGGATTTGGGCAACCTCAATTGATTAGCAAAACACCATCTCTGAATTCAAAATTTCTTCCTCAGGGAAGTGGTGGTATAATAGCAGGTAAAACAAGCGCCTTACTGCAGGGTAGTGATGTCAACCCTTCGTCCCATTCTAGTCCTATTGCTAGAATAGATGCTCCAATTGCCCACAACCCTAAGCCTGTTGCTACAACTGTTTCAGTGGTGTCCTCTCCTGAGAAGCCAGTTGTTCCCTCAACGAGGTTTAATCCTGCAGATCTTCATAAGAAAACTGTTTCACTGCTGGAGGAATATTTCAGCGTTCGAATTCTTGATGAAGCTCGGCAAGTGTGTGGAGGACTTGAAAGCCCCTTCCTATCACCCAGAGGTTGTTAA 1935 44.91 MQADHSVVSLRPGGGSGFRGSKFFTPRFQSSSSGAPTLHPHGGAAPALKSGDLRFEGQERVMYTRDQLLQLREFKTVSEDILKIKQEIDAEFLVEDQSWARANADNNQRLPPQGPFSDLDYRDWRGRSSQLPASGEERSWNDNKELMSRDINGQQDQLNIQFTVALISSQAVGPAPALVKAEVPWSVRRGNLSERERILKAVKGILNKLTPEKFDVLKGQLINSGITTPDILKGVISLIFDKAVLEPTFCPMYALLCSDLNDKLPPFPSDEPGGKDITFKRVLLDICQEAFENADNLRAEIRQMADPKLDAERREKERMVKLRTLGNIRLIGELLKQKMVSEKIVHHIVQELLGSEGKVCPAEENVEAICQFFSTIGKQLDEGPKSRRVNDIYFSRLKELTANIQLAPRLRFMVRNVVDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSTAIMRNGRNAAVIGGMMPGRPGSGGLMPGMPGTRRMPGMPGFDDDNWEVPRSRSKARNDGPIQSVGFGQPQLISKTPSLNSKFLPQGSGGIIAGKTSALLQGSDVNPSSHSSPIARIDAPIAHNPKPVATTVSVVSSPEKPVVPSTRFNPADLHKKTVSLLEEYFSVRILDEARQVCGGLESPFLSPRGC 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 956482 961161 - Bda016045.1 Bda03g00106 3365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00106 644 MobiDBLite consensus disorder prediction 505 524 - -
Bda03g00106 644 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 641 - -
Bda03g00106 644 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 641 IPR045208 GO:0003743
Bda03g00106 644 SUPERFAMILY ARM repeat 192 427 IPR016024 -
Bda03g00106 644 Pfam MIF4G domain 199 424 IPR003890 GO:0003723|GO:0005515
Bda03g00106 644 SMART if4_15 199 424 IPR003890 GO:0003723|GO:0005515
Bda03g00106 644 Gene3D - 190 425 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00660 Bda03g00106 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00311 Bda-Chr2:42762270 Bda03g00106 Bda-Chr3:956482 0 dispersed
Bda03g00106 Bda-Chr3:956482 Bda09g00900 Bda-Chr9:25213730 0 dispersed
Bda01g00660 Bda-Chr1:33611765 Bda03g00106 Bda-Chr3:956482 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00106 K03260 - vvi:100250837 833.943