Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00114 ATTGAAAGTGGTGCGTTAGAATTAAGTGTGATGCTTATTTGTGGCAACAGCCAAAATGGAAAGTTCAGCTATGGATATGCGAGCTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACGCGAATAGATGGCGTTGATGGGGAAGTAGTAGGCCTTTTTGGGGTTTTTGACGGTCATGGTGGTGCACGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAATCTGCTATAGCTGATGCCTACAACCATACAGACTCGGAGTTTCTAAAATCAGAAAATAATCAGAACAGGGATGCTGGATCGACTGCTTCCACTGCTATTTTAGTTGGTAACCGTTTGCTTGTTGCTAATGTTGGGGATTGCAGAGCTGTCATATGCCGTGGTGGAAATGCTATTGCTGTCTCACGAGACCACAAACCCAATCAATCAGATGAAAGACAACGAATTGAAGATGCTGGAGGATTTGTTATATGGGCAGGAACTTGGAGAGTTGGAGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGCTGTTGAAGCAATATGTTGTCGCTGATCCAGAAATTCAGGAGGAAAAGGTAGACAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTATCTAACGAGGAAGCAGTTGCGATGATAAAACCAATCCAGGACCCGGAGGAGGCCGCCAAAAGGTTGATGCAGGAAGCATATCTGAAGGGCAGTGCCGATAACATTACCTGTGTCGTTGTACGGTTCTTGGCCAGTCCCGGCGCTACCTCTTGCGAAACTTCCGAGTAA 849 45.23 IESGALELSVMLICGNSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGNRLLVANVGDCRAVICRGGNAIAVSRDHKPNQSDERQRIEDAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIQDPEEAAKRLMQEAYLKGSADNITCVVVRFLASPGATSCETSE 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1021779 1024108 + Bda016053.1 Bda03g00114 3373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00114 282 CDD PP2Cc 22 269 IPR001932 -
Bda03g00114 282 SMART PP2C_SIG_2 18 269 IPR001932 -
Bda03g00114 282 Gene3D - 14 272 IPR036457 -
Bda03g00114 282 PANTHER ALPHABET, ISOFORM E-RELATED 15 276 - -
Bda03g00114 282 ProSiteProfiles PPM-type phosphatase domain profile. 23 269 IPR001932 -
Bda03g00114 282 SUPERFAMILY PP2C-like 16 269 IPR036457 -
Bda03g00114 282 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 15 276 - -
Bda03g00114 282 Pfam Protein phosphatase 2C 51 262 IPR001932 -
Bda03g00114 282 ProSitePatterns PPM-type phosphatase domain signature. 54 62 IPR000222 GO:0043169
Bda03g00114 282 SMART PP2C_4 13 267 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00652 Bda03g00114 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00114 Bda-Chr3:1021779 Bda09g01017 Bda-Chr9:40189384 1.43E-69 dispersed
Bda03g00897 Bda-Chr3:7832645 Bda03g00114 Bda-Chr3:1021779 1.96E-24 dispersed
Bda13g01574 Bda-Chr13:39243086 Bda03g00114 Bda-Chr3:1021779 6.94E-55 dispersed
Bda14g00243 Bda-Chr14:1703696 Bda03g00114 Bda-Chr3:1021779 3.64E-56 dispersed
Bda07g01926 Bda-Chr7:36727788 Bda03g00114 Bda-Chr3:1021779 7.90E-91 transposed
Bda11g00699 Bda-Chr11:6937124 Bda03g00114 Bda-Chr3:1021779 1.83E-46 transposed
Bda01g00652 Bda-Chr1:33517281 Bda03g00114 Bda-Chr3:1021779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00114 K17506 - tcc:18587664 496.508