Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00114 | ATTGAAAGTGGTGCGTTAGAATTAAGTGTGATGCTTATTTGTGGCAACAGCCAAAATGGAAAGTTCAGCTATGGATATGCGAGCTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACGCGAATAGATGGCGTTGATGGGGAAGTAGTAGGCCTTTTTGGGGTTTTTGACGGTCATGGTGGTGCACGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAATCTGCTATAGCTGATGCCTACAACCATACAGACTCGGAGTTTCTAAAATCAGAAAATAATCAGAACAGGGATGCTGGATCGACTGCTTCCACTGCTATTTTAGTTGGTAACCGTTTGCTTGTTGCTAATGTTGGGGATTGCAGAGCTGTCATATGCCGTGGTGGAAATGCTATTGCTGTCTCACGAGACCACAAACCCAATCAATCAGATGAAAGACAACGAATTGAAGATGCTGGAGGATTTGTTATATGGGCAGGAACTTGGAGAGTTGGAGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGCTGTTGAAGCAATATGTTGTCGCTGATCCAGAAATTCAGGAGGAAAAGGTAGACAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTATCTAACGAGGAAGCAGTTGCGATGATAAAACCAATCCAGGACCCGGAGGAGGCCGCCAAAAGGTTGATGCAGGAAGCATATCTGAAGGGCAGTGCCGATAACATTACCTGTGTCGTTGTACGGTTCTTGGCCAGTCCCGGCGCTACCTCTTGCGAAACTTCCGAGTAA | 849 | 45.23 | IESGALELSVMLICGNSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGNRLLVANVGDCRAVICRGGNAIAVSRDHKPNQSDERQRIEDAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIQDPEEAAKRLMQEAYLKGSADNITCVVVRFLASPGATSCETSE | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1021779 | 1024108 | + | Bda016053.1 | Bda03g00114 | 3373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00114 | 282 | CDD | PP2Cc | 22 | 269 | IPR001932 | - | |
Bda03g00114 | 282 | SMART | PP2C_SIG_2 | 18 | 269 | IPR001932 | - | |
Bda03g00114 | 282 | Gene3D | - | 14 | 272 | IPR036457 | - | |
Bda03g00114 | 282 | PANTHER | ALPHABET, ISOFORM E-RELATED | 15 | 276 | - | - | |
Bda03g00114 | 282 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 269 | IPR001932 | - | |
Bda03g00114 | 282 | SUPERFAMILY | PP2C-like | 16 | 269 | IPR036457 | - | |
Bda03g00114 | 282 | PANTHER | PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C | 15 | 276 | - | - | |
Bda03g00114 | 282 | Pfam | Protein phosphatase 2C | 51 | 262 | IPR001932 | - | |
Bda03g00114 | 282 | ProSitePatterns | PPM-type phosphatase domain signature. | 54 | 62 | IPR000222 | GO:0043169 | |
Bda03g00114 | 282 | SMART | PP2C_4 | 13 | 267 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00652 | Bda03g00114 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00114 | Bda-Chr3:1021779 | Bda09g01017 | Bda-Chr9:40189384 | 1.43E-69 | dispersed | |
Bda03g00897 | Bda-Chr3:7832645 | Bda03g00114 | Bda-Chr3:1021779 | 1.96E-24 | dispersed | |
Bda13g01574 | Bda-Chr13:39243086 | Bda03g00114 | Bda-Chr3:1021779 | 6.94E-55 | dispersed | |
Bda14g00243 | Bda-Chr14:1703696 | Bda03g00114 | Bda-Chr3:1021779 | 3.64E-56 | dispersed | |
Bda07g01926 | Bda-Chr7:36727788 | Bda03g00114 | Bda-Chr3:1021779 | 7.90E-91 | transposed | |
Bda11g00699 | Bda-Chr11:6937124 | Bda03g00114 | Bda-Chr3:1021779 | 1.83E-46 | transposed | |
Bda01g00652 | Bda-Chr1:33517281 | Bda03g00114 | Bda-Chr3:1021779 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00114 | K17506 | - | tcc:18587664 | 496.508 |