Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda03g00133 | ATGTGCTTGGATGCAGCTGAGGATGATTCAGCCTCAGAGATTCATCTTCCAGCTGAAATCGATTGGCACATGCTTGACAAATCCAAGTTTTTCTTCCTCGGCGCCGCTCTATTTTCCGGTGTATCGGCTGCGCTATATCCGGTCATCGTGCTAAAGACCCGGCAGCAGGTTTCTCCCAACAAGCTTTCTTGCTTCAACATGTCCTATTCCATCATCCGCCACGAGGGTTTTCGAGGGTTCTACAGAGGTTTTGGTACTTCTTTAATGGGAACAATTCCAGCTCGAGCTCTTTACATGGGATCCCTCGAAATTACCAAGAGTAGCGTCGGCAGTGCGACTGTCAGATTCGGCTTTTCAGATACGTCTGCTATGGCGATGGCTAATGCTGCTGCAGGGCTAACCTCAGCCATGGCGGCGCAATTAGTTTGGACTCCAGTTGACGTGGTGAGCCAGAGACTAATGGTCCAAGGAAGCAACAATGGCGGAAAAAACATCGCCCCTTGTCTCAATTCTCGCAGATACAGCAATGGAGTCGACGCTTTTCGAAAAATCATCAATGCCGATGGATTGAGAGGATTGTACAGAGGCTTTGGAATGTCAATATTGACATACGCACCCTCCAACGCCGTCTGGTGGGCTTCTTACTCCGTAGCTCACAGGCTCATCTGGAATGGTCTCAACCAGAATAGTGAAATTCAAGGCCATGGCTATGGCGGGTTTAAGCCAGATTCAAAGACTCTGATTGGAGTTCAGGGGGTAAGTGCAGCCATGGCAAGCGGAGTTTCTGCAATGATAACAATGCCGCTTGACACAATAAAGACGAGACTGCAAGTACTGGACGGAGAAGAAAATGGGCAGAGGCGGCCATTAACAGCATTTCAGACTGTAAAAAACTTGGTGAAAGAAGGTGGATTCCCAGCTTGTTACAGAGGATTAGGACCAAGGTGGGCTTCAATGGCTATATCTGCAACTACGATGATCACCACTTACGAATTTCTCAAACAGCTTTCAGCTAAAACTTAA | 1023 | 47.9 | MCLDAAEDDSASEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPVIVLKTRQQVSPNKLSCFNMSYSIIRHEGFRGFYRGFGTSLMGTIPARALYMGSLEITKSSVGSATVRFGFSDTSAMAMANAAAGLTSAMAAQLVWTPVDVVSQRLMVQGSNNGGKNIAPCLNSRRYSNGVDAFRKIINADGLRGLYRGFGMSILTYAPSNAVWWASYSVAHRLIWNGLNQNSEIQGHGYGGFKPDSKTLIGVQGVSAAMASGVSAMITMPLDTIKTRLQVLDGEENGQRRPLTAFQTVKNLVKEGGFPACYRGLGPRWASMAISATTMITTYEFLKQLSAKT | 340 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1171354 | 1172376 | - | Bda016074.1 | Bda03g00133 | 3392 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda03g00133 | 340 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
| Bda03g00133 | 340 | SUPERFAMILY | Mitochondrial carrier | 23 | 333 | IPR023395 | - | |
| Bda03g00133 | 340 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 246 | 336 | IPR018108 | - | |
| Bda03g00133 | 340 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 339 | - | - | |
| Bda03g00133 | 340 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 339 | - | - | |
| Bda03g00133 | 340 | Gene3D | Mitochondrial carrier domain | 29 | 340 | IPR023395 | - | |
| Bda03g00133 | 340 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 221 | IPR018108 | - | |
| Bda03g00133 | 340 | Pfam | Mitochondrial carrier protein | 39 | 108 | IPR018108 | - | |
| Bda03g00133 | 340 | Pfam | Mitochondrial carrier protein | 252 | 338 | IPR018108 | - | |
| Bda03g00133 | 340 | Pfam | Mitochondrial carrier protein | 126 | 223 | IPR018108 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda01g00634 | Bda03g00133 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00133 | Bda-Chr3:1171354 | Bda12g00204 | Bda-Chr12:2014370 | 1.98E-86 | dispersed | |
| Bda10g00867 | Bda-Chr10:43170391 | Bda03g00133 | Bda-Chr3:1171354 | 7.62E-169 | transposed | |
| Bda01g00634 | Bda-Chr1:33332162 | Bda03g00133 | Bda-Chr3:1171354 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda03g00133 | K15121 | - | pvy:116124757 | 516.153 |