Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00136 ATGATCAGTCAGAATACAAGCCATTGGACGTCTACTGACGAGGCAACAGTGAGAGAAAGCGAGGAGGATGGCTCCATTTCCTTGGAGGGTGACCTGAATCTCGATGCCCCTTGCGCGCTTTCTGTGGCAAGTGAAAGCAGTGGGTTATGCAGAGAGGACTTGTCGGCATTTGATGCATCCTCTGAAATTGGAGCTGCGGCTTCTGAAAAATTTTCCGGTGGCATCGACATTGCCTCTGAGGCATCCAATAGTTCTGCATCAATTGTTGAGACAAATACTGTAATGAGTCCGCTTCAAAGTCCTCGTCTTCCTCTCGAGAGAGTGGTGAGCAGAATGTCCTGCGGCAATGTTTTGGAGACAGATTATGTACCTCTCTGGGGATTTACGTCAATTTGTGGAAGAAGGCCCGAGATGGAAGATGCAGTTGCAACTGTACCTCGAATTTTTGAAATACCTATTCAGATGATCACTGACGACCAACTTCCAGATGGGACGAGCGAGATTTTGACTTGTCAAACTGTTCATTTCTTTGGTGTTTATGATGGTCATGGTGGTTCTCAGGTTGCAAACTACTGTCGTGATAGAATCCACTTGGCTTTAGTCGAAGAGATCGAATTTGTTATGGAAGGTCTAGTTTCTGGAAGTAACAAGGAAAATTGCCAAGAGCGATGGAAAAAAGCATTCACCAACTGTTTTTTAAAAGTTGATGCTGAAGTTGCTGGAAAATCTAGTGTCAAGCCTGTTGCACCGGAAACCGTTGGATCTACTGCTGTCGTTGCTATTGTTTGTTCTTCTCACATTATTGTAGCCAATTGTGGAGACTCGAGAGCAGTTCTGTGTCGTGGTAAAGAATCTCTGCCGTTGTCAGTGGATCATAAACCGGACAGGGATGACGAGTATGCTAGAATTGAGGCTGCTGGAGGCAAGGTCATCCAATGGAATGGACATCGTGTCTTCGGCGTTCTTGCAATGTCAAGATCTATTGGTGATGGATATTTAAAACCATGGATTATTCCTGAACCGGAATTGATGTTTCTTCGCCGGGCCAAAGACGACGAATGCCTCATTCTAGCCAGCGATGGTTTATGGGATGTCATGAGTAACGAAGAGGCATGCGAGGTGGCGCGGAGACAAATACTCTTCTGGCACAAAAAGAATGGCCTCACACTACCTTCGAAGAGGGGAGAGGAAATTGATCTAGCTGCTCAAGCAGCAGCTGAGTTTCTCTCGAACTGTGCACTTCAAAAGGGTAGCAAGGACAACATCAGTGTGATTGTGGTGGACTTGAAAGCTAAAAGGAAATTCAAGACAAAATCATAA 1320 45.45 MISQNTSHWTSTDEATVRESEEDGSISLEGDLNLDAPCALSVASESSGLCREDLSAFDASSEIGAAASEKFSGGIDIASEASNSSASIVETNTVMSPLQSPRLPLERVVSRMSCGNVLETDYVPLWGFTSICGRRPEMEDAVATVPRIFEIPIQMITDDQLPDGTSEILTCQTVHFFGVYDGHGGSQVANYCRDRIHLALVEEIEFVMEGLVSGSNKENCQERWKKAFTNCFLKVDAEVAGKSSVKPVAPETVGSTAVVAIVCSSHIIVANCGDSRAVLCRGKESLPLSVDHKPDRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDGYLKPWIIPEPELMFLRRAKDDECLILASDGLWDVMSNEEACEVARRQILFWHKKNGLTLPSKRGEEIDLAAQAAAEFLSNCALQKGSKDNISVIVVDLKAKRKFKTKS 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1182055 1183903 - Bda016076.1 Bda03g00136 3395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00136 439 ProSitePatterns PPM-type phosphatase domain signature. 176 184 IPR000222 GO:0043169
Bda03g00136 439 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 85 438 - -
Bda03g00136 439 Pfam Protein phosphatase 2C 172 422 IPR001932 -
Bda03g00136 439 ProSiteProfiles PPM-type phosphatase domain profile. 125 429 IPR001932 -
Bda03g00136 439 SMART PP2C_4 115 427 IPR001932 -
Bda03g00136 439 PANTHER ALPHABET, ISOFORM E-RELATED 85 438 - -
Bda03g00136 439 Gene3D - 113 439 IPR036457 -
Bda03g00136 439 SUPERFAMILY PP2C-like 122 430 IPR036457 -
Bda03g00136 439 MobiDBLite consensus disorder prediction 1 29 - -
Bda03g00136 439 CDD PP2Cc 127 429 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01341 Bda03g00136 CCT
Bda01g01341 Bda03g00136 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01335 Bda-Chr1:49031016 Bda03g00136 Bda-Chr3:1182055 3.60E-157 dispersed
Bda01g01341 Bda-Chr1:49109190 Bda03g00136 Bda-Chr3:1182055 0 dispersed
Bda02g00832 Bda-Chr2:48900353 Bda03g00136 Bda-Chr3:1182055 4.35E-76 dispersed
Bda03g00136 Bda-Chr3:1182055 Bda10g00866 Bda-Chr10:43167648 8.44E-147 dispersed
Bda04g00541 Bda-Chr4:54099893 Bda03g00136 Bda-Chr3:1182055 9.24E-22 dispersed
Bda03g00136 Bda-Chr3:1182055 Bda14g00146 Bda-Chr14:997516 4.41E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00136 K14497 - zju:107435535 614.764