Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00136 | ATGATCAGTCAGAATACAAGCCATTGGACGTCTACTGACGAGGCAACAGTGAGAGAAAGCGAGGAGGATGGCTCCATTTCCTTGGAGGGTGACCTGAATCTCGATGCCCCTTGCGCGCTTTCTGTGGCAAGTGAAAGCAGTGGGTTATGCAGAGAGGACTTGTCGGCATTTGATGCATCCTCTGAAATTGGAGCTGCGGCTTCTGAAAAATTTTCCGGTGGCATCGACATTGCCTCTGAGGCATCCAATAGTTCTGCATCAATTGTTGAGACAAATACTGTAATGAGTCCGCTTCAAAGTCCTCGTCTTCCTCTCGAGAGAGTGGTGAGCAGAATGTCCTGCGGCAATGTTTTGGAGACAGATTATGTACCTCTCTGGGGATTTACGTCAATTTGTGGAAGAAGGCCCGAGATGGAAGATGCAGTTGCAACTGTACCTCGAATTTTTGAAATACCTATTCAGATGATCACTGACGACCAACTTCCAGATGGGACGAGCGAGATTTTGACTTGTCAAACTGTTCATTTCTTTGGTGTTTATGATGGTCATGGTGGTTCTCAGGTTGCAAACTACTGTCGTGATAGAATCCACTTGGCTTTAGTCGAAGAGATCGAATTTGTTATGGAAGGTCTAGTTTCTGGAAGTAACAAGGAAAATTGCCAAGAGCGATGGAAAAAAGCATTCACCAACTGTTTTTTAAAAGTTGATGCTGAAGTTGCTGGAAAATCTAGTGTCAAGCCTGTTGCACCGGAAACCGTTGGATCTACTGCTGTCGTTGCTATTGTTTGTTCTTCTCACATTATTGTAGCCAATTGTGGAGACTCGAGAGCAGTTCTGTGTCGTGGTAAAGAATCTCTGCCGTTGTCAGTGGATCATAAACCGGACAGGGATGACGAGTATGCTAGAATTGAGGCTGCTGGAGGCAAGGTCATCCAATGGAATGGACATCGTGTCTTCGGCGTTCTTGCAATGTCAAGATCTATTGGTGATGGATATTTAAAACCATGGATTATTCCTGAACCGGAATTGATGTTTCTTCGCCGGGCCAAAGACGACGAATGCCTCATTCTAGCCAGCGATGGTTTATGGGATGTCATGAGTAACGAAGAGGCATGCGAGGTGGCGCGGAGACAAATACTCTTCTGGCACAAAAAGAATGGCCTCACACTACCTTCGAAGAGGGGAGAGGAAATTGATCTAGCTGCTCAAGCAGCAGCTGAGTTTCTCTCGAACTGTGCACTTCAAAAGGGTAGCAAGGACAACATCAGTGTGATTGTGGTGGACTTGAAAGCTAAAAGGAAATTCAAGACAAAATCATAA | 1320 | 45.45 | MISQNTSHWTSTDEATVRESEEDGSISLEGDLNLDAPCALSVASESSGLCREDLSAFDASSEIGAAASEKFSGGIDIASEASNSSASIVETNTVMSPLQSPRLPLERVVSRMSCGNVLETDYVPLWGFTSICGRRPEMEDAVATVPRIFEIPIQMITDDQLPDGTSEILTCQTVHFFGVYDGHGGSQVANYCRDRIHLALVEEIEFVMEGLVSGSNKENCQERWKKAFTNCFLKVDAEVAGKSSVKPVAPETVGSTAVVAIVCSSHIIVANCGDSRAVLCRGKESLPLSVDHKPDRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDGYLKPWIIPEPELMFLRRAKDDECLILASDGLWDVMSNEEACEVARRQILFWHKKNGLTLPSKRGEEIDLAAQAAAEFLSNCALQKGSKDNISVIVVDLKAKRKFKTKS | 439 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1182055 | 1183903 | - | Bda016076.1 | Bda03g00136 | 3395 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00136 | 439 | ProSitePatterns | PPM-type phosphatase domain signature. | 176 | 184 | IPR000222 | GO:0043169 | |
Bda03g00136 | 439 | PANTHER | PROTEIN PHOSPHATASE 2C 6-RELATED | 85 | 438 | - | - | |
Bda03g00136 | 439 | Pfam | Protein phosphatase 2C | 172 | 422 | IPR001932 | - | |
Bda03g00136 | 439 | ProSiteProfiles | PPM-type phosphatase domain profile. | 125 | 429 | IPR001932 | - | |
Bda03g00136 | 439 | SMART | PP2C_4 | 115 | 427 | IPR001932 | - | |
Bda03g00136 | 439 | PANTHER | ALPHABET, ISOFORM E-RELATED | 85 | 438 | - | - | |
Bda03g00136 | 439 | Gene3D | - | 113 | 439 | IPR036457 | - | |
Bda03g00136 | 439 | SUPERFAMILY | PP2C-like | 122 | 430 | IPR036457 | - | |
Bda03g00136 | 439 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Bda03g00136 | 439 | CDD | PP2Cc | 127 | 429 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01341 | Bda03g00136 | CCT | |
Bda01g01341 | Bda03g00136 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01335 | Bda-Chr1:49031016 | Bda03g00136 | Bda-Chr3:1182055 | 3.60E-157 | dispersed | |
Bda01g01341 | Bda-Chr1:49109190 | Bda03g00136 | Bda-Chr3:1182055 | 0 | dispersed | |
Bda02g00832 | Bda-Chr2:48900353 | Bda03g00136 | Bda-Chr3:1182055 | 4.35E-76 | dispersed | |
Bda03g00136 | Bda-Chr3:1182055 | Bda10g00866 | Bda-Chr10:43167648 | 8.44E-147 | dispersed | |
Bda04g00541 | Bda-Chr4:54099893 | Bda03g00136 | Bda-Chr3:1182055 | 9.24E-22 | dispersed | |
Bda03g00136 | Bda-Chr3:1182055 | Bda14g00146 | Bda-Chr14:997516 | 4.41E-83 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00136 | K14497 | - | zju:107435535 | 614.764 |