Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00139 ATGGGTAGGCAGCCATTGATAATTGTGGCAGACGCCGAGCTCTGCAGAGAAGTTGGAATTAAGAAATTCAAGGACATTCCTAACAGAAGCATTCCTTCGCCAATCTCAGCCTCCCCTCTTCATCAGAAAGGTCTTTTTTTTACAAGGGATTCAAGATGGTCGTCCATGAGAAACACCATTTTATCGGTCTATCAGCCTTCGCATCTCGCCAGCCTAATCCCAACCATGCAGTCATACATCGAATCCGCGACTCAAAACCTTCATTCGTCTACCGAAGAAGACATTTCTTTCTCTAACCTTTCCCTCAAATTGGCCACTGACGTGATTGGCCAGGCTGCATTCGGGGTCGACTTTGGCCTAACGAAACCTCAACCGCCACCCGGAAAGTCCGTGCTAGATAAAAAAGATAACCAAAATGATGGAGTTTCAGACTTCATAAATGAACATATATACTCCACGACTCAGCTTAAGATGGATTTATCAGGCTCCTTTTCGATCATCCTGGGTCTACTTATGCCCTTTCTGCAAGAACCATTCAGGCAAATCTTGAAAAGAATACCCGGCACGATGGACTGGAAAGTCGATCGAACAAACCGGAATTTGAGTGGTAGGATTGAGGAGATTGTTGAAAAGAGGACAAAAGATAAAGAAATGGCGGCTTCAAAAGATTTCTTGTCTCTGATTTTGAATGCCAGAGAATCAGAGACAAAGTCAATTTTCACCAGAGACTACCTTGGCGCGGTTACTTATGAGCACTTACTTGCAGGCTCAACTACTACCTCATTTACATTGTCTTCCACTTTGTATTTAGTGGCAGCACATCCAGAAGTCGAGAAGAAGTTACTTGAAGAAATCGATGGATTTGGTCCGCCCGATCAAATTCCAACCGCCAATGATCTTCAACTAAAATTCCCATATCTTGATCAGGTGATTAAGGAGTCGATGCGATACTACACTGTTTCACCACTTGTAGCGAGAGAAACATCGAAAGAAGTTGAAATAGGCGGCTATCTTCTTCCCAAGGGGACGTGGGTATGGTTAGCAGTCGGAGTTTTAGCCAAAGATCCTATGAATTTTCCTGAACCAAACAAGTTCAAACCAGACAGGTTCGATCCAAACTGCAAGGAAGAGAAACAAAGGCATCCTTATGCCTTAATACCTTTTGGAATTGGCCCAAGAGCCTGCGTTGGCCAGAAGTTTTCTGTGCTGGAACTAAAGCTCTCGATAATTCATTTGTATCGGAATTACATTTTCCGACACTCTCCATCGATGGAAAACCCTCTGGAATTTGAGTATGGTATTGTTCTTAATTTCAAGTATGGTGTCAAGCTTAGAGTGATCAAACGTGTAGAAGAAAAATAA 1362 43.02 MGRQPLIIVADAELCREVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSSMRNTILSVYQPSHLASLIPTMQSYIESATQNLHSSTEEDISFSNLSLKLATDVIGQAAFGVDFGLTKPQPPPGKSVLDKKDNQNDGVSDFINEHIYSTTQLKMDLSGSFSIILGLLMPFLQEPFRQILKRIPGTMDWKVDRTNRNLSGRIEEIVEKRTKDKEMAASKDFLSLILNARESETKSIFTRDYLGAVTYEHLLAGSTTTSFTLSSTLYLVAAHPEVEKKLLEEIDGFGPPDQIPTANDLQLKFPYLDQVIKESMRYYTVSPLVARETSKEVEIGGYLLPKGTWVWLAVGVLAKDPMNFPEPNKFKPDRFDPNCKEEKQRHPYALIPFGIGPRACVGQKFSVLELKLSIIHLYRNYIFRHSPSMENPLEFEYGIVLNFKYGVKLRVIKRVEEK 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1205149 1206728 - Bda016080.1 Bda03g00139 3398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00139 453 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 449 - -
Bda03g00139 453 PRINTS E-class P450 group I signature 244 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS E-class P450 group I signature 348 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS E-class P450 group I signature 264 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS P450 superfamily signature 255 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 Pfam Cytochrome P450 1 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 PANTHER THROMBOXANE-A SYNTHASE 1 449 - -
Bda03g00139 453 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Bda03g00139 453 SUPERFAMILY Cytochrome P450 1 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00139 453 Gene3D Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01076 Bda03g00139 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00139 Bda-Chr3:1205149 Bda02g00461 Bda-Chr2:45385013 3.12E-29 dispersed
Bda03g00139 Bda-Chr3:1205149 Bda01g01076 Bda-Chr1:45403356 2.62E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00139 K20771 - rcu:8274543 728.013