Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00153 | ATGGAGGAATTCAACCAGCTAAGCGAGAACTCAAATCACAGGGGAAGTTTCTTTTACACCTCGGCTCTTCTTGCAGGCAATTCTTCTCCTTCTAATCATGGAAGATCAACAACAGGAGGCTCTAGGCAAACACAAATAGCCATTAATAACTTTCACGGCGACTGCTTTCAGCCTGATCCTATCGTTAAAACGGAAGCTTTCACTTCGATGCACCGTGATCAAAAACTTTATCGTCCACTGATAGGAAGCCATCAAAGTTCTATTCAAAGGACCGATGAAGGCTCAAATGATGTTGAGGCGATTAAGTCTAAGATCTCTGCCCATCCCCAGTATTCTAACCTCTTGAAAGCTTATATGGATTGCCAAAAGGTGGGAGCTCCGCCAGAAGTGGCGGCTAGTCTAACTGAGGCTCGCCGGCAGTTTGAAGCCCGTCAGCGAACTGCGTCAAGAGATAATACGAAGGATCCCGAACTTGATCAGTTCATGGAAGCATATTACGATATGCTGGTGAAATATCGTGAAGAGATTACGAGGCCCATTCAAGAAGCAACGGATTTCATGCATCGGATTGAATCTCAACTCTATGCGCTTTGCAATGGCCCAATCCGGATCTTCACCTCCGATGAAAAATGCCAAGGCAATGGGTCATCGGAGGACGATCAGGACAACAGCGGAGGGGATACAGAACTCCCGGAGATGGATCTGAGGGCGGAAGATCGAGAACTGAAGAATCAGCTTCTAAGGAAGTACAGTGGCTATTTAAGCAGTCTGAAGCAAGAACTGTCGAAGAAAAAAAAGAAAGGAAAGCTACCCAAAGATGCAAGGCAAAAGCTACTGAACTGGTGGGAGCTGCATTACAAATGGCCATATCCGTCGGAGACGGAGAAGGCGGCGCTGGCCGAGTTGACCGGGCTGGACCAGAAACAAATCAACAACTGGTTCATAAATCAAAGGAAGAGACACTGGAAACCTTCAGAAGACGTGCAATTTATGGTCATGGATGGACTTTATCCTCCCAATGGAGTGCTCTGTATGGACTCCCACTACATGGCTAATGCCCATTATCGCCTCGGACCTTGA | 1080 | 46.94 | MEEFNQLSENSNHRGSFFYTSALLAGNSSPSNHGRSTTGGSRQTQIAINNFHGDCFQPDPIVKTEAFTSMHRDQKLYRPLIGSHQSSIQRTDEGSNDVEAIKSKISAHPQYSNLLKAYMDCQKVGAPPEVAASLTEARRQFEARQRTASRDNTKDPELDQFMEAYYDMLVKYREEITRPIQEATDFMHRIESQLYALCNGPIRIFTSDEKCQGNGSSEDDQDNSGGDTELPEMDLRAEDRELKNQLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSETEKAALAELTGLDQKQINNWFINQRKRHWKPSEDVQFMVMDGLYPPNGVLCMDSHYMANAHYRLGP | 359 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1277899 | 1279982 | + | Bda016095.1 | Bda03g00153 | 3412 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00153 | 359 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 1 | 349 | - | - | |
Bda03g00153 | 359 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 | 1 | 349 | - | - | |
Bda03g00153 | 359 | ProSitePatterns | 'Homeobox' domain signature. | 299 | 322 | IPR017970 | GO:0000981|GO:0006355 | |
Bda03g00153 | 359 | SUPERFAMILY | Homeodomain-like | 262 | 337 | IPR009057 | - | |
Bda03g00153 | 359 | Pfam | KNOX2 domain | 154 | 198 | IPR005541 | GO:0003677|GO:0005634 | |
Bda03g00153 | 359 | Gene3D | - | 266 | 328 | - | - | |
Bda03g00153 | 359 | SMART | KNOX2_2 | 148 | 199 | IPR005541 | GO:0003677|GO:0005634 | |
Bda03g00153 | 359 | Pfam | Homeobox KN domain | 281 | 320 | IPR008422 | GO:0003677|GO:0006355 | |
Bda03g00153 | 359 | SMART | ELK_2 | 241 | 262 | IPR005539 | GO:0003677 | |
Bda03g00153 | 359 | SMART | KNOX1_2 | 99 | 143 | IPR005540 | GO:0003677|GO:0005634 | |
Bda03g00153 | 359 | ProSiteProfiles | 'Homeobox' domain profile. | 261 | 324 | IPR001356 | GO:0003677 | |
Bda03g00153 | 359 | MobiDBLite | consensus disorder prediction | 208 | 232 | - | - | |
Bda03g00153 | 359 | SMART | HOX_1 | 263 | 328 | IPR001356 | GO:0003677 | |
Bda03g00153 | 359 | Pfam | ELK domain | 241 | 262 | IPR005539 | GO:0003677 | |
Bda03g00153 | 359 | CDD | homeodomain | 273 | 325 | IPR001356 | GO:0003677 | |
Bda03g00153 | 359 | Pfam | KNOX1 domain | 100 | 142 | IPR005540 | GO:0003677|GO:0005634 | |
Bda03g00153 | 359 | ProSiteProfiles | ELK domain profile. | 241 | 261 | IPR005539 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00605 | Bda03g00153 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00153 | Bda-Chr3:1277899 | Bda15g00550 | Bda-Chr15:8647777 | 3.54E-87 | dispersed | |
Bda01g00605 | Bda-Chr1:33054749 | Bda03g00153 | Bda-Chr3:1277899 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15611 | PF03791 | KNOX2 | 5.80E-23 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00153 | - | - | vvi:100255834 | 506.138 |