Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00154 ATGGGTTCCGATGATGTCTCCACCGGCCTTGTTCTTGGTCTGAGCCACCGTCCCAAAGCTGAGCAATCTCTCAAACCGTGTCATCTGAAAAAGAAGAGTCCGTCTGCGAATTTTGGAAGTGTCTTTCTCACTTTAGGTTTTTCCGACGAGACCAACCCAATGGCTACCAACTCCAGCGTCAATAAGCAACTTCCCGACGAACAACGTGATGCACTCCGGCGGCAGGCCTCTGCTTCAAACTCATCCAGTTTCAAGCGGGATAGGGACTTCTGCGACGGGGATGAGATAGAAGCGGAGGCTGAGGTGGAGTTAGAGCGAATCTCGCCTAGGCTCAGCGAGGAAGAAGAAGACGGCGCCGGCAGCCCGAGGAAAAAACTGAGACTCACAAAAGATCAATCTGCCATTTTGGAGTACAGCTTCAAAGAGCATGCCACTCTAAACCCCAAACAAAAACAAGAGCTGGCAAGAAGGTTGAGTTTAAGCACAAGACAAGTGGAAGTTTGGTTCCAAAACAGGAGAGCCAGGACAAAGCTGAAGCAAACAGAAGAGAGCTGCGAGCTGTTGAAGAAATGCTGCGAATCACTAACAGAAGAGAACAAGAGGCTAAAGAAGGAGCTTCAAGACATCAAATCAATAAAACCAGCAGCTCATCCGCCATTTTATATGCAGCTCCAAACAGCAACTCTCTCAATGTGTCCTTCTTGCGAGAGAATTAGCAGTATCGGCGACGGCTCTTCTCCGACGAGCACTCTCTCAGTTGGTCCAAAATCTAACCTCTGTAATTCCCCATAA 792 48.74 MGSDDVSTGLVLGLSHRPKAEQSLKPCHLKKKSPSANFGSVFLTLGFSDETNPMATNSSVNKQLPDEQRDALRRQASASNSSSFKRDRDFCDGDEIEAEAEVELERISPRLSEEEEDGAGSPRKKLRLTKDQSAILEYSFKEHATLNPKQKQELARRLSLSTRQVEVWFQNRRARTKLKQTEESCELLKKCCESLTEENKRLKKELQDIKSIKPAAHPPFYMQLQTATLSMCPSCERISSIGDGSSPTSTLSVGPKSNLCNSP 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1282273 1283333 - Bda016096.1 Bda03g00154 3413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00154 263 Pfam Homeodomain 123 177 IPR001356 GO:0003677
Bda03g00154 263 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 61 248 - -
Bda03g00154 263 MobiDBLite consensus disorder prediction 240 263 - -
Bda03g00154 263 MobiDBLite consensus disorder prediction 49 90 - -
Bda03g00154 263 Pfam Homeobox associated leucine zipper 179 211 IPR003106 GO:0006355|GO:0043565
Bda03g00154 263 CDD homeodomain 122 180 IPR001356 GO:0003677
Bda03g00154 263 SMART halz 179 224 IPR003106 GO:0006355|GO:0043565
Bda03g00154 263 MobiDBLite consensus disorder prediction 102 125 - -
Bda03g00154 263 SMART HOX_1 121 183 IPR001356 GO:0003677
Bda03g00154 263 Coils Coil 178 212 - -
Bda03g00154 263 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Bda03g00154 263 MobiDBLite consensus disorder prediction 49 65 - -
Bda03g00154 263 SUPERFAMILY Homeodomain-like 117 180 IPR009057 -
Bda03g00154 263 Gene3D - 116 186 - -
Bda03g00154 263 PANTHER - 61 248 - -
Bda03g00154 263 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00604 Bda03g00154 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00154 Bda-Chr3:1282273 Bda14g01152 Bda-Chr14:10700030 1.35E-17 dispersed
Bda05g01092 Bda-Chr5:59257255 Bda03g00154 Bda-Chr3:1282273 1.35E-56 transposed
Bda09g00987 Bda-Chr9:39417747 Bda03g00154 Bda-Chr3:1282273 1.83E-34 transposed
Bda14g01299 Bda-Chr14:14333252 Bda03g00154 Bda-Chr3:1282273 1.20E-64 transposed
Bda04g00754 Bda-Chr4:56760556 Bda03g00154 Bda-Chr3:1282273 1.37E-07 transposed
Bda01g00604 Bda-Chr1:33050342 Bda03g00154 Bda-Chr3:1282273 5.47E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15612 PF00046 Homeodomain 1.10E-16 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00154 K09338 - qsu:111996753 247.284