Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00160 | ATGAAGCCCAGTGATGATGTCAAAAATGGTGGCAACAATGATAATAAGAGCTGGTTGGGTTTTTCTCTGTCACCACATATGAAAATGGAGGAGAACAGTTCCGCGTCCGTCTCCAATGCTTATCCAGCTAGCTTCTACTCCTACCCTCATTTCAACAGCTCCACATTCGGCTACGAGATTGGCGGACATGGCGGTTTCCACCCTCCACTGCCTCTCAAGCTAGACGGGTCTCTTTCAATCATGGAAGCTCTTACCAGATCACAGCCCGAAGGAATGGTTCTGAATTCCTCGCCGAAGCTGGAGGATTTTTTCGGAGGTGCAAGCTTAGGAACACTTGCAAACGAGTACAGAAGCCATGGAAGAGAAGGAAGCTTTTATAATCAAAACTACCAATCTGAAACAGAGAGGGAAGTTTCTTTCGATCTGCTTCAACAGCCATACGGGCAACAAGAGAGCCACATTCCAGTTCATTCTCATCCGTACATTTCAGGAATCCCCCGCCACGGGTTATCCAATCCGTCGGAGGAGGAATCGAAGCTCAATATTTCCAACTGGGTGGCCCGTCATTACTCCGGAAACCAACCTCTGGAGCAGCATTTAAGCACCGGGATTATTGAAGTCGGAGCTTCTTCTGGGTCTGTTGGTCCGATGGGCTGCGGAAATTTGCAGTCGCTTAGTCTGTCTATGAGCCCGGGCTCACAGTCAAGCTGCGTTACAGCTCCTGCCCAGATCTCACCTGCTGATGTAGAATGTGCAGACATTGAAACGAAGAAAAGAGTTTCTACGAAGATGGGTCAGAAGCAGCCTGTACATAGGAAGTCCATTGATACTTTTGGACAAAGAACATCGCAGTACAGAGGCGTTACGAGGTTTTGTGTCAGACATAGGTGGACGGGAAGGTATGAAGCTCATTTATGGGATAACAGTTGCAAGAAGGAAGGACAAACCAGAAAGGGAAGACAAGGCGGCTACGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCTTGCGGCTCTCAAGTACTGGGGACCATCAACGCACATAAACTTTCCGCTGGAGAATTATCATACTCAACTAGAAGAAATGAAGAACATGAGCCGCCAGGAATATGTAGCTCATCTGAGAAGGAAGAGCAGTGGATTTTCTAGGGGAGCTTCAATGTACAGAGGAGTAACGAGATCACTTAGATTTAGTCTGTCAGCTCGTTTTTGTTTGGAGTTTTTCAGGCATCACCAGCATGGAAGATGGCAAGCTCGGATTGGCCGTGTTGCGGGAAACAAAGATCTTTATCTTGGAACATTTAGCACCCAGGAGGAAGCTGCTGAAGCTTACGACATTGCGGCGATAAAGTTCCGAGGCGTAAATGCCGTTACCAACTTTGACATTTCACGATATGATGTCGAAAAAATCATAGCTAGTAGTACTCTACTTGCCGGCGAATATGCTCGACGGAACAAAACAAGGGAACCGACCCAAATCATAGATCACAAACCTCAAGTGCAAGAAAGTGATGAAATCAATCTCTCTGATAAGTCCAATGGAAATGGAGGAACTCATTGGCGGACAGAATCCTCGAATAATAACATGATGAACTTGGCCAATGAGCCAATGGGCATTGAAACTGTCCGCTCGACTGATCCCGTGATTGGCCAATCGACAAAGCTGGGGCCGCCATTTCCTATCCCCGCACCAATTCCTAGCAGTTTGAGCTGCGCAAGGGGCACCAACGCAGATAAAACCAGCCCAATGCTGTTTGCAAAGCCTCCATTGGCATGGCTGCCCACAGCACAGCTGAGGTCTCCTGTTATTTCCATGTCTCAGTTGCCTGTTTTTGCAGCCTGGAATGACGCCTAA | 1854 | 47.52 | MKPSDDVKNGGNNDNKSWLGFSLSPHMKMEENSSASVSNAYPASFYSYPHFNSSTFGYEIGGHGGFHPPLPLKLDGSLSIMEALTRSQPEGMVLNSSPKLEDFFGGASLGTLANEYRSHGREGSFYNQNYQSETEREVSFDLLQQPYGQQESHIPVHSHPYISGIPRHGLSNPSEEESKLNISNWVARHYSGNQPLEQHLSTGIIEVGASSGSVGPMGCGNLQSLSLSMSPGSQSSCVTAPAQISPADVECADIETKKRVSTKMGQKQPVHRKSIDTFGQRTSQYRGVTRFCVRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYHTQLEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRSLRFSLSARFCLEFFRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVEKIIASSTLLAGEYARRNKTREPTQIIDHKPQVQESDEINLSDKSNGNGGTHWRTESSNNNMMNLANEPMGIETVRSTDPVIGQSTKLGPPFPIPAPIPSSLSCARGTNADKTSPMLFAKPPLAWLPTAQLRSPVISMSQLPVFAAWNDA | 617 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1319585 | 1322070 | - | Bda016102.2 | Bda03g00160 | 3419 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00160 | 617 | CDD | AP2 | 283 | 351 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 14 | 615 | - | - | |
Bda03g00160 | 617 | Pfam | AP2 domain | 409 | 453 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | Pfam | AP2 domain | 285 | 343 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | MobiDBLite | consensus disorder prediction | 501 | 527 | - | - | |
Bda03g00160 | 617 | CDD | AP2 | 386 | 463 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | ProSiteProfiles | AP2/ERF domain profile. | 284 | 351 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | SMART | rav1_2 | 408 | 467 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | SMART | rav1_2 | 284 | 357 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | SUPERFAMILY | DNA-binding domain | 409 | 463 | IPR016177 | GO:0003677 | |
Bda03g00160 | 617 | ProSiteProfiles | AP2/ERF domain profile. | 387 | 461 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | Gene3D | AP2/ERF domain | 283 | 353 | IPR036955 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | Gene3D | AP2/ERF domain | 387 | 463 | IPR036955 | GO:0003700|GO:0006355 | |
Bda03g00160 | 617 | MobiDBLite | consensus disorder prediction | 505 | 527 | - | - | |
Bda03g00160 | 617 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 14 | 615 | - | - | |
Bda03g00160 | 617 | SUPERFAMILY | DNA-binding domain | 284 | 353 | IPR016177 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00600 | Bda03g00160 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00763 | Bda-Chr10:42073745 | Bda03g00160 | Bda-Chr3:1319585 | 2.24E-76 | dispersed | |
Bda13g01680 | Bda-Chr13:40175782 | Bda03g00160 | Bda-Chr3:1319585 | 2.70E-06 | dispersed | |
Bda07g00737 | Bda-Chr7:8698315 | Bda03g00160 | Bda-Chr3:1319585 | 2.20E-94 | transposed | |
Bda07g01133 | Bda-Chr7:13478377 | Bda03g00160 | Bda-Chr3:1319585 | 6.35E-109 | transposed | |
Bda09g00309 | Bda-Chr9:3852688 | Bda03g00160 | Bda-Chr3:1319585 | 3.55E-101 | transposed | |
Bda09g00968 | Bda-Chr9:38813225 | Bda03g00160 | Bda-Chr3:1319585 | 1.61E-93 | transposed | |
Bda10g00018 | Bda-Chr10:354206 | Bda03g00160 | Bda-Chr3:1319585 | 8.21E-152 | transposed | |
Bda12g01055 | Bda-Chr12:42319295 | Bda03g00160 | Bda-Chr3:1319585 | 4.87E-75 | transposed | |
Bda01g00600 | Bda-Chr1:33002327 | Bda03g00160 | Bda-Chr3:1319585 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15614 | PF00847 | AP2 | 6.10E-07 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00160 | K09285 | - | jre:108983297 | 704.131 |