Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00167 ATGTCCTTCTGCAACCACTCAATAATGGCGAACCTTCATCTCTCTTCTTTTTACTCCCTTCTTCTTCTTTCACTGGCTGGGTTAGTGGCTGGATTATCTTCCTTTGACGTTAAATATCTTCCTGGATTTGAAGGCCCTCTTCCTTTTCATTTTGAAACTGGATACGTGGGCGTGGGAGAGTCAGAGGATGTGCAGCTTTTCTACTACTTTTTCAAGTCGGAGAAAAGCCCGGAGAACGACCCTGTTCTACTTTGGCTCGTCGGAGGTCCGGGCTGCGCTGCTTTGTCTGCTATAGCTTTTGAGATAGGTCCATTTAATTATGTCATCAACCAGTATAACGGGAGCTTGCCAACCTTGGGACTGAACCCATATTCATGGACGAAGGAAGCGAGTGTAATATTCGTAGACTCCCCTGTTGGGACTGGCTTTTCATATGCAAGAACACCGAACGCTTTCCAGCCTGGAGACTTCAATCAAATTCACCAGATCCATCAATTCCTCCGAAAGTGGTTCACTGATCATCCAGAATTCATACCAAATCCTCTCTACGTCGGTGGAGATTCATATACAGGCATCCCTCTTCCGGTCATCGTTCAAGAAATCTTACATGGAAACGAGCAAGGTGCTAAGCCATTGGTGAATCTTCAGGGATATTTACTGGGAAATCCAGGAACTCTGTCCACCGTTGAGTCTAATTTCTTAATCCCTTTTTGCCATGGAATGGGATTAATCTCCGACGAACTGTACGAGTCACTGAAGCAGACTTGTAAAGGAGTGTTTGGAGATCTCCACCCCCTCAACCAAGAGTGTTTACAAGATCTCGACGAGGCTCATAAGTGTATTTCAGGAATTAATACTGTACATATTTTGGAACCTATATGTCTTTTTTACTCTCCGAAGCCACGACAAAGACTCGATCGAAGATCTCTGTTTAACACCGATAATCTCTTCTCCGACTCCGACCCGCCCTTTCCTCCGATAACCTGCCGAAGTTATGGATATTTGCTGTGTAGATACTGGGCCAACGATCCTAAAGTTCAAAAGGCTCTTCACATACGAGAGGGCAGTATTGAACAATGGAAGCGCTGTGGCCTGGAGGCTTATCGCTACGAAATTCCGAGTAGTTTTCCATATCATGTAAACCTTAGTGCTAAAGGAGTTCGATCGTTGATATATAGTGGGGATCACGACACGGTAATACCATTCTTGGGCACTCAAGCGTGGATAAGGCTGTTGAACTACTCCATTGATGACGATTGGAGGCCATGGCTGGTCAGAGGCCAAGTTGCGGGTTTTGCGAGGTCCTACTCGAACAAGATGACCTTTGCAACTGTCAAGGGAGGAGGGCATACAGCTCCAGAATACAAACCAGAAGAATGTTTAGCCATGTTTGCGAGATGGGTGTCTGGGCGTCCTCTGTAG 1422 45.92 MSFCNHSIMANLHLSSFYSLLLLSLAGLVAGLSSFDVKYLPGFEGPLPFHFETGYVGVGESEDVQLFYYFFKSEKSPENDPVLLWLVGGPGCAALSAIAFEIGPFNYVINQYNGSLPTLGLNPYSWTKEASVIFVDSPVGTGFSYARTPNAFQPGDFNQIHQIHQFLRKWFTDHPEFIPNPLYVGGDSYTGIPLPVIVQEILHGNEQGAKPLVNLQGYLLGNPGTLSTVESNFLIPFCHGMGLISDELYESLKQTCKGVFGDLHPLNQECLQDLDEAHKCISGINTVHILEPICLFYSPKPRQRLDRRSLFNTDNLFSDSDPPFPPITCRSYGYLLCRYWANDPKVQKALHIREGSIEQWKRCGLEAYRYEIPSSFPYHVNLSAKGVRSLIYSGDHDTVIPFLGTQAWIRLLNYSIDDDWRPWLVRGQVAGFARSYSNKMTFATVKGGGHTAPEYKPEECLAMFARWVSGRPL 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1360358 1362900 + Bda016109.1 Bda03g00167 3426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00167 473 Pfam Serine carboxypeptidase 41 470 IPR001563 GO:0004185|GO:0006508
Bda03g00167 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Bda03g00167 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Bda03g00167 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Bda03g00167 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Bda03g00167 473 SUPERFAMILY alpha/beta-Hydrolases 37 472 IPR029058 -
Bda03g00167 473 Gene3D alpha/beta hydrolase 32 300 IPR029058 -
Bda03g00167 473 PANTHER CARBOXYPEPTIDASE, PUTATIVE-RELATED 19 470 - -
Bda03g00167 473 Gene3D - 329 473 - -
Bda03g00167 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 470 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00167 Bda-Chr3:1360358 Bda14g01532 Bda-Chr14:25647472 7.54E-102 dispersed
Bda03g00167 Bda-Chr3:1360358 Bda14g00341 Bda-Chr14:2458162 2.23E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00167 K16296 - tcc:18591952 620.542