Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00192 ATGAGCATAGCGTTCTTGGATCCGGGAAATTTGGAAGGGGATCTTCAGGCAGGTGCTATTGCAGGCTACTCATTGCTTTGGTTGTTGATGTGGGCGACGGCTATGGGGCTGCTGATCCAGCTCTTGTCAGCGAGAGTCGGCGTCGCCACGGGTCGGCACTTGGCCGAGCTCTGTAGGGAAGAGTATCCAAACTGGGCAAGATATATTCTGTGGTGCATGGCTGAGATAGCCTTGATTGGTGCTGATATTCAGGAAGTCATTGGAAGTGCGATAGCTATCCAGATTCTCAGCCATGGCGTTCTCCCTCTCTGGGCTGGTGTTATCATTACAGCATCCGATTGTTTGTTATTTTTATTTCTGGAGAACTACGGGGTGCGAAAGTTAGAAGCTGTTTTCGCCGTCCTAATTGCAACCATGGCGCTATCTTTCGCATGGATGTTCGGGGATGCAAATCCAAACGGAAAAGAACTCTTAGCAGGTATTTTGATTCCAAGACTTAGCTCAAAAACAATTCGACAAGCTGTTGGGGTCGTCGGCTGTGTTATAATGCCTCATAACGTATTTTTGCATTCTGCTTTAGTACAATCAAGGAATATCGATCCCCATAAAAAAGGGAGAGTGCAAGAAGCTCTCAATTATTACTCGATCGAGTCATCAGTCGCGCTTTTCATATCGTTTATGATCAATTTGTTCGTCACAACGGTGTTTGCCAAGGGATTTTACAAGTCTCAACAAGCCAACAGTATAGGACTTGTCAACGCCGGGCAGTATCTTCAGCAGAAATACGGCGGAGGGATATTTCCAATACTTTACATTTGGGGTATCGGCTTGCTGGCCGCGGGGCAGAGCAGCACAATTACCGGAACATATGCCGGACAGTTTATAATGGGAGGTTTTCTTAACCTTCGGTTGAAGAAATGGCTGAGGGCGTTGATTACACGAAGCTTTGCGATCATTCCGACAATGGTCGTTGCTCTCGTGTTTAATACGTCAGAGGCTTCATTGGACGTTTTAAACGAATGGCTCAATGTGCTTCAGTCGATACAAATTCCTTTTGCTCTCATTCCTCTTCTCACCTTGGTGTCCAGAGAGCAGATCATGGGAGTCTTCAAAATCGGTATTCTTCTCCAGTGGACGGCATGGACGGTGGCTGCATTAGTGATGGTAATCAATGGATATCTGCTGTTAGATTTTTTTATTTCTGAAGTTAGAGGAATTCTTTTCGGCTTGATCGTCTTGTCGGGCACGGTTGTGTATGTATCGTTCATCGTTTATCTAATTTCGTATGGCGGGGCTCTTCCTTCGACCTGGTTCAATGCAATGGTGGAGAAAATGAGGAATGGTTGA 1347 45.95 MSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARVGVATGRHLAELCREEYPNWARYILWCMAEIALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITASDCLLFLFLENYGVRKLEAVFAVLIATMALSFAWMFGDANPNGKELLAGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRNIDPHKKGRVQEALNYYSIESSVALFISFMINLFVTTVFAKGFYKSQQANSIGLVNAGQYLQQKYGGGIFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIIPTMVVALVFNTSEASLDVLNEWLNVLQSIQIPFALIPLLTLVSREQIMGVFKIGILLQWTAWTVAALVMVINGYLLLDFFISEVRGILFGLIVLSGTVVYVSFIVYLISYGGALPSTWFNAMVEKMRNG 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1551583 1553445 - Bda016137.1 Bda03g00192 3451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00192 448 PANTHER BNAC08G04640D PROTEIN 1 443 - -
Bda03g00192 448 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 Hamap Divalent metal cation transporter MntH [mntH]. 1 399 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 70 96 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 281 300 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 309 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 100 119 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 125 146 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 PRINTS Natural resistance-associated macrophage protein signature 174 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 1 367 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda03g00192 448 Pfam Natural resistance-associated macrophage protein 12 373 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00192 Bda-Chr3:1551583 Bda14g01264 Bda-Chr14:13309200 0 dispersed
Bda11g01453 Bda-Chr11:20187721 Bda03g00192 Bda-Chr3:1551583 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00192 K21398 - tcc:18592024 772.311