Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00194 | TTCCGCATGTCTGAAATCTGTGTTCGTCTCATTCGCGCTGCAAAGAAGAGAGAGGCCGCGGCTGGAATGGCGGAAGAACCATTGATTAAGAAGGAACGGGTCGTCTTAGGAGAGCTTCCTATTTTGCAGAATGCTAGTTTGCTTGTAGGTTTAAGGTCTGTCGAAAACTCAGATAAGCAGAAATGTATGGCGAGGAGGAAGGCGAACACGAAATGTTCGAGGATAGCTACAGAAAACAAAGCTAAAATAGCGAAGGATAGCAGTTTGAAATTGGGAATTGATCCGGATTCGGACGACCCTCAAATGTGCCGTTCTTATGCTACAGATATTTATGATTATCTTCACAAAATGGAGATGGAACCGAAAAGAAGGCCACTCCACAATTATCTTGAGAAAATTCAGAAGGATGTGACTGCTAATATGCGAGGAGTGTTGGTCGATTGGTTGGTAGAGGTCGCCGAGGAGTACAAACTCTGTTCAGATACTCTTTACCTCTCCATCTCTTATATCGATAGGTTTTTGTCTTTGCACACTCTTAATCGACAAAGGCTTCAACTTCTCGGCGTTTCTGCCGTGCTCATTGCTTCTAAGTACGAAGAGATTAGCCCTCCACATGTAGAAGAGTTGTGCTATATCACGGACAATACTTACACAAAAAACGAAGTGGTGAAGATGGAGGCTGATTTACTCAAATCTTTGAATTTCGAAACTGGCAATCCTACAACTAAGACATTCTTGAGACGGTTTATTAGTATTTCCCAAGAGCGAAATAGTGATCCCAACTCGCAGCTAGAGTTTCTGAGTTACTATCTTGCAGAATTAAGTTTACTGGACTACAATTTCTTAAAGTTCTTGCCCTCTTTGGTTGCTGCTGCTGTTGTTTTCATTGCAAAGTTCATACTTGAACCAAAGAATCACCCATGGCCACAATTGTTGGAACAATATTCTGGGTATAAATCGAACGAGTTGAAAGACTGTGTTCTTATGCTGCTTGACCTGTATCTGTGCAGAAGAGGAGGGTCTCTCTTAGCCATCAGAGAGAAATACAAGCAGCAGAAGTTCAAATGTGTGTCATCTCTCCCTTCGCCTCCGGAGATACCCGCTTTATATTTTGAGGATGTACGAGGGTTGTTGTCGATGCGATAA | 1146 | 42.58 | FRMSEICVRLIRAAKKREAAAGMAEEPLIKKERVVLGELPILQNASLLVGLRSVENSDKQKCMARRKANTKCSRIATENKAKIAKDSSLKLGIDPDSDDPQMCRSYATDIYDYLHKMEMEPKRRPLHNYLEKIQKDVTANMRGVLVDWLVEVAEEYKLCSDTLYLSISYIDRFLSLHTLNRQRLQLLGVSAVLIASKYEEISPPHVEELCYITDNTYTKNEVVKMEADLLKSLNFETGNPTTKTFLRRFISISQERNSDPNSQLEFLSYYLAELSLLDYNFLKFLPSLVAAAVVFIAKFILEPKNHPWPQLLEQYSGYKSNELKDCVLMLLDLYLCRRGGSLLAIREKYKQQKFKCVSSLPSPPEIPALYFEDVRGLLSMR | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1558109 | 1560119 | + | Bda016139.1 | Bda03g00194 | 3453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00194 | 381 | PIRSF | Cyclin_A_B_D_E | 13 | 369 | IPR039361 | - | |
Bda03g00194 | 381 | Pfam | Cyclin, C-terminal domain | 240 | 362 | IPR004367 | - | |
Bda03g00194 | 381 | ProSitePatterns | Cyclins signature. | 142 | 173 | IPR006671 | - | |
Bda03g00194 | 381 | PANTHER | CYCLINS | 24 | 374 | IPR039361 | - | |
Bda03g00194 | 381 | Pfam | Cyclin, N-terminal domain | 109 | 236 | IPR006671 | - | |
Bda03g00194 | 381 | SMART | Cyclin_C_2 | 240 | 363 | IPR004367 | - | |
Bda03g00194 | 381 | CDD | CYCLIN | 141 | 230 | IPR013763 | - | |
Bda03g00194 | 381 | SUPERFAMILY | Cyclin-like | 98 | 236 | IPR036915 | - | |
Bda03g00194 | 381 | CDD | CYCLIN | 240 | 331 | IPR013763 | - | |
Bda03g00194 | 381 | Gene3D | - | 109 | 359 | - | - | |
Bda03g00194 | 381 | SUPERFAMILY | Cyclin-like | 240 | 365 | IPR036915 | - | |
Bda03g00194 | 381 | Gene3D | - | 123 | 238 | - | - | |
Bda03g00194 | 381 | PANTHER | CYCLIN-A3-1-RELATED | 24 | 374 | - | - | |
Bda03g00194 | 381 | SMART | cyclin_7 | 244 | 332 | IPR013763 | - | |
Bda03g00194 | 381 | SMART | cyclin_7 | 147 | 231 | IPR013763 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01560 | Bda03g00194 | CCT | |
Bda01g01560 | Bda03g00194 | ECH | |
Bda01g00581 | Bda03g00194 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01454 | Bda-Chr1:50454887 | Bda03g00194 | Bda-Chr3:1558109 | 9.47E-90 | dispersed | |
Bda03g00056 | Bda-Chr3:687131 | Bda03g00194 | Bda-Chr3:1558109 | 3.82E-85 | dispersed | |
Bda03g00194 | Bda-Chr3:1558109 | Bda08g01363 | Bda-Chr8:54121845 | 6.99E-119 | dispersed | |
Bda01g00581 | Bda-Chr1:32830373 | Bda03g00194 | Bda-Chr3:1558109 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00194 | K06627 | - | zju:107433703 | 471.47 |