Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00209 | ATGGAGCTGGCGGAGCAGCTGAAGTCGGAGGATCAGATGGAGATAATGATGATGATGATGCATCAAACGGACAAAAACCAAGCATTTTGCGGCGCCTACAATGATATCACTGAATTTTCACCGTCTGATTATGCTGGTTCGAGCGGCTGTAATAACACCACTGCCATCCCGCATTGTTCAGACAGCCTCCAACAGTCGTCTCATTCTTTCATAAATTTTCCTTTGTCTTCTTCTTTGGCGAACAATGGTTCTTCGTTATCGGCAGAGACGCAGGCGCCATTTTTATCCAGGTGGGGAGGTGAATTATCCAGCGGTGAAAATGGCTTCTTCTCTTCACCTGATTCTGAAAGACCTAATTCAATGGCCACAATGAGGGAGATGATTTTCCGAATTGCAGCGATGCAGCCAATTCATATAGACCCAGAATCGGTGAAGCCGCCGAAACGGAGGAACGTGAAGATATCGAAAGACCCACAAAGCGTAGCGGCTAGGCACCGGAGAGAGAAGATAAGTGAGAGAATCAGAATTCTTCAGAGGCTAGTACCAGGTGGGACGAAAATGGATACAGCTTCCATGTTGGACGAAGCTATTCATTACGTTAAATTCTTGAAGGGCCAAGTGCAGTCCTTGGAGAGAGCTGCAGTTAACAGGCCGGCTGGTTTAGAGTATCCCATTGCAGTCTCTAATGGCGGAAGCTATTTTCCTGTGGCAAAGGATTGCCAATTCCCTCGTCGAATTTAG | 741 | 46.96 | MELAEQLKSEDQMEIMMMMMHQTDKNQAFCGAYNDITEFSPSDYAGSSGCNNTTAIPHCSDSLQQSSHSFINFPLSSSLANNGSSLSAETQAPFLSRWGGELSSGENGFFSSPDSERPNSMATMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRREKISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKGQVQSLERAAVNRPAGLEYPIAVSNGGSYFPVAKDCQFPRRI | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1641488 | 1642228 | + | Bda016154.1 | Bda03g00209 | 3468 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00209 | 246 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 158 | 213 | IPR036638 | GO:0046983 | |
Bda03g00209 | 246 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 5 | 241 | IPR045843 | GO:0003700|GO:0006355 | |
Bda03g00209 | 246 | Pfam | Helix-loop-helix DNA-binding domain | 164 | 203 | IPR011598 | GO:0046983 | |
Bda03g00209 | 246 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 154 | 203 | IPR011598 | GO:0046983 | |
Bda03g00209 | 246 | PANTHER | BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN | 5 | 241 | - | - | |
Bda03g00209 | 246 | Gene3D | - | 153 | 219 | IPR036638 | GO:0046983 | |
Bda03g00209 | 246 | CDD | bHLH_AtIND_like | 155 | 211 | - | - | |
Bda03g00209 | 246 | SMART | finulus | 160 | 209 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00569 | Bda03g00209 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00209 | Bda-Chr3:1641488 | Bda08g01375 | Bda-Chr8:54326517 | 3.10E-63 | dispersed | |
Bda03g00472 | Bda-Chr3:4069235 | Bda03g00209 | Bda-Chr3:1641488 | 2.78E-06 | dispersed | |
Bda01g00158 | Bda-Chr1:22494252 | Bda03g00209 | Bda-Chr3:1641488 | 4.77E-11 | transposed | |
Bda04g00329 | Bda-Chr4:47712302 | Bda03g00209 | Bda-Chr3:1641488 | 2.02E-43 | transposed | |
Bda01g00569 | Bda-Chr1:32705315 | Bda03g00209 | Bda-Chr3:1641488 | 1.97E-141 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15622 | PF00010 | HLH | 1.60E-06 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00209 | - | - | tcc:18591179 | 255.373 |