Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00218 ATGGTGGTGGGTGACGAATCATACGAAGAATGCCGTCGAAAGAGGGTGGAGGAGAATAAGAGAAGAATGGAAGCCCTCAACCTACCCCGCCTCTCTCTGACTTTTCGAAATCGCAAAGCTTCTTCTCTTAAGCCCTCCCCTGTAAGCTATTCTCTCTCTTTCTTTGTATTTATTAGTGGGCTATGCTTCTCGTCTTATCTGCAGATGCTGCTGAATCAGGTGAAGAAGTCGCTTTTAATGGAGAAACAACGGGTGTTGGTGAGGAGATCAAGTCGCCCTAACTTAATGCATTCTGTTCGTCTTGATCGTCTATCAATACCAAGAAGGATTTCTAAGAGCAGGGATTTTTCAGATCGAGTATATGCTTCGACTCCGGCAAGGAAGGTGGCTATTGACAAAGCTGAACAGCTGAAATCTGAATTAGACCCCCAATTTCCCACCTTTGTTAAGCCAATGCTTCCATCTCATGTCAGCGGGGGTTTTTGGCTGGTCTTATCATTATTTGCATTCTTCTTTAGCTCAGCAGTGATGATCTTCCTATTTGATGGACACAATGGGTCTGGAGCTGCTATTTACACCAAGGAAAATCTGTTTAACAACATTCTTGCTGCTATTCCTTCTGATCTCAACAGAGATGAGTGGGTTGCAGCATTGCCTAGAGCTTTAGTTGCAGGCTTTGTAAGAACAGATAAAGATTTTCAGGAAAAAGCACGAACATCTGGGACCACTGTCACTTTTGTGATTATAGAAGGATGGGTCATAACTGTTGCATCTGTTGGGGATTCTCGTTGCATTCTTGAACCTGCTGAAGGTGGTATTTATTATTTGTCAGCAGATCATAGACTCGAAAGTAATGAAGAAGAGAGGGACCGTATCGTTGCTAGTGGAGGCGAGGTAGGTCGGCTCAATACTGGTGGTGGTGCAGAGATTGGCCCTTTGAGATGTTGGCCTGGTGGTTTATGCCTTTCACGATCTATTGGTGATATGGATGTTGGTGAATACATTGTTCCCGTGCCATATGTAAAGCAAGTGAAGCTGTCTACTGCTGGTGGAAGGGTCATTCTCTCAAGTGATGGTGTTTGGGATTCTTTGTCAGCAGAAACAGCTTTTGATTGCTGTCGTGGACTTCCTGCAGAAGCTGCAGCTGCGCAAATAGTCAAGGAAGCTTTACAAGCTAAGGGACTTCGAGATGATACTACATGCATTGTCATTGACATATTATCTCAAGATAAACTAGCTCCTCCTTTACCACCACCAAAGAAACCGGTTAAAGGAGTATTCAAATCCATGTTCCGCAAAAAGCCTTGCGAATCATCATCTAATGCTGACAAAGAATATATTGAGCCTGATGTAGTCGAGGAATTGTTTGAGGAAGGGTCTGCTATGCTATCAGAGAGGTTAGACACGAAATATCCTCTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTTTGCCAAGTAGAGATCAAACCTAGAGAGGGTATATCAATACATGCTGGCACATCTAAGAGAGGAAAAATGCGTCCTTGGGATGGCCCTTTCCTATGCATGAGTTGCCAGGAGAAAAAGGAAGCCATGGAAGGAAAGAGACCATCAGGAGGTGTTTCATCTCTCTCTCTATATATATATATATGTTGTGTGTGTGTGCTGTGTGCACGGGCGTGTGGGCGCGCTCGTGTGTGTATCCGACATGCACATAGGTCAGGCTTTGTAGCATCCAAAAAAAAATTAGTCCAGTAG 1740 44.02 MVVGDESYEECRRKRVEENKRRMEALNLPRLSLTFRNRKASSLKPSPVSYSLSFFVFISGLCFSSYLQMLLNQVKKSLLMEKQRVLVRRSSRPNLMHSVRLDRLSIPRRISKSRDFSDRVYASTPARKVAIDKAEQLKSELDPQFPTFVKPMLPSHVSGGFWLVLSLFAFFFSSAVMIFLFDGHNGSGAAIYTKENLFNNILAAIPSDLNRDEWVAALPRALVAGFVRTDKDFQEKARTSGTTVTFVIIEGWVITVASVGDSRCILEPAEGGIYYLSADHRLESNEEERDRIVASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPYVKQVKLSTAGGRVILSSDGVWDSLSAETAFDCCRGLPAEAAAAQIVKEALQAKGLRDDTTCIVIDILSQDKLAPPLPPPKKPVKGVFKSMFRKKPCESSSNADKEYIEPDVVEELFEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPREGISIHAGTSKRGKMRPWDGPFLCMSCQEKKEAMEGKRPSGGVSSLSLYIYICCVCVLCARACGRARVCIRHAHRSGFVASKKKLVQ 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1692292 1704083 - Bda016162.4 Bda03g00218 3477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00218 579 PANTHER ALPHABET, ISOFORM E-RELATED 173 534 - -
Bda03g00218 579 Pfam Protein phosphatase 2C 180 389 IPR001932 -
Bda03g00218 579 CDD PP2Cc 180 406 IPR001932 -
Bda03g00218 579 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 173 534 - -
Bda03g00218 579 SMART PP2C_4 154 404 IPR001932 -
Bda03g00218 579 Gene3D - 169 413 IPR036457 -
Bda03g00218 579 SUPERFAMILY PP2C-like 168 406 IPR036457 -
Bda03g00218 579 ProSiteProfiles PPM-type phosphatase domain profile. 161 406 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00218 Bda-Chr3:1692292 Bda08g01091 Bda-Chr8:24200855 3.89E-146 dispersed
Bda01g01636 Bda-Chr1:52290418 Bda03g00218 Bda-Chr3:1692292 2.47E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00218 - - tcc:18591227 630.557