Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00230 | CTCAAAATGCAGGCCTCGGGCTGCTTCTTCCTTCTCTCTCTTCTTCTTCTTTCGTATTCTTCTCTCTCTTTCGCTCTTACAGACGAGGAAGCTTCTTTCATTGCTAGTCGTCAGCTTCTTACCTTCCACGAGAATGGTGATTTGCCGGATAATTTCGAGTTTACCTTTACCTTGAACGTAACATTTGACAACAGCAGGCTTAGAAAAGCTTACATTGCTCTGCAAGAATGGAAGAAGGCCATTTTCTCCGACCCTTTTAACACTACTGGAAATTGGGTCGGAGCTGATGTTTGCTCTTACACTGGAGTTTTCTGCGCACCGGCTCTCGATGATCCTAATGTCACCGTCGTCGCCGGGATCGACATCAACCACGCTGACATCGCCGGCCACCTTCCGGTTGAGTTGGGCCTGTTGACAGATATCGCATTGTTTCACATTAATACCAACAGGTTTTGTGGAGTTATTCCGAAAAGTTTCTACAGGCTTACGCTTCTTCACGAGCTCGACGTCAGCAACAACCGCTTTGTCGGACCTTTTCCTACCGTCGTCCTCTCTATTCCAAATCTCCATTATCTTGATTTGAGGTTCAATGACTTCGAGGGTGAGTTGCCGCCGGAGCTTTTTGAGAAGGAACTAGACGCCATTTTCTTGAACAACAACAGGTTCACATCTACCATTCCGGAGAACTTCGGAAACTCTACGGCCTCGGTCGTCGTCGTTGCCAACAACCATCTGAAGGGATGTATTCCAAACAGCATTGGTAAAATGAAGAACACTCTCGACGAGATAATATTCTTGAACAACGAGCTCGGAGGGTGCTTGCCATCGGAGATTGGATTGCTCGGAAACGCGACTGTTCTGGATATTGCGTCGAACTCATTCACCGGAATCTTGCCCAAGACATTTACAGCTCTTGAAAAGATTGAACAGTTGGATATTTCTCACAATGTTTTGACTGGGTTTGTCTCGGGGAGTCTCTGCAAATTGCCCGGATTGGTTAACTTCACATACTCCCACAACTTCTTCAATGGTGCAGCAGTCGAATGCACGCCCTCATCGAAGAAGAACATTGCGTTTGACGATACCATTAACTGCTTGCCGCAGAGGCCGAAGCAAAGAGGTGAGAAAATTTGCAGTGAAGTGGTAAACAAGCCGGTGGATTGCATCTCCTTCGCCGCCAGTCTACTCACCTCCCCATCCGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCATTTATTCTTCTCCACCTCCGGTGA | 2709 | 46.95 | LKMQASGCFFLLSLLLLSYSSLSFALTDEEASFIASRQLLTFHENGDLPDNFEFTFTLNVTFDNSRLRKAYIALQEWKKAIFSDPFNTTGNWVGADVCSYTGVFCAPALDDPNVTVVAGIDINHADIAGHLPVELGLLTDIALFHINTNRFCGVIPKSFYRLTLLHELDVSNNRFVGPFPTVVLSIPNLHYLDLRFNDFEGELPPELFEKELDAIFLNNNRFTSTIPENFGNSTASVVVVANNHLKGCIPNSIGKMKNTLDEIIFLNNELGGCLPSEIGLLGNATVLDIASNSFTGILPKTFTALEKIEQLDISHNVLTGFVSGSLCKLPGLVNFTYSHNFFNGAAVECTPSSKKNIAFDDTINCLPQRPKQRGEKICSEVVNKPVDCISFAASLLTSPSVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPFILLHLR | 902 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1783340 | 1786446 | + | Bda016173.1 | Bda03g00230 | 3489 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 673 | 746 | - | - | |
Bda03g00230 | 902 | SUPERFAMILY | L domain-like | 72 | 345 | - | - | |
Bda03g00230 | 902 | MobiDBLite | consensus disorder prediction | 400 | 902 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 824 | 895 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 5 | 389 | - | - | |
Bda03g00230 | 902 | Gene3D | Ribonuclease Inhibitor | 70 | 366 | IPR032675 | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 764 | 836 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 398 | 461 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 614 | 686 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 5 | 389 | - | - | |
Bda03g00230 | 902 | Pfam | Leucine rich repeat | 285 | 340 | IPR001611 | GO:0005515 | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 764 | 836 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 398 | 461 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 780 | 851 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 554 | 626 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 450 | 521 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 495 | 566 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 554 | 626 | - | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 719 | 791 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 780 | 851 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 824 | 895 | - | - | |
Bda03g00230 | 902 | Pfam | Leucine rich repeat N-terminal domain | 73 | 105 | IPR013210 | - | |
Bda03g00230 | 902 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 450 | 521 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 673 | 746 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 614 | 686 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 495 | 566 | - | - | |
Bda03g00230 | 902 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 | 719 | 791 | - | - | |
Bda03g00230 | 902 | MobiDBLite | consensus disorder prediction | 404 | 893 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00230 | Bda-Chr3:1783340 | Bda11g00593 | Bda-Chr11:6051484 | 3.00E-120 | dispersed | |
Bda03g00230 | Bda-Chr3:1783340 | Bda03g00124 | Bda-Chr3:1080363 | 3.32E-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00230 | - | - | mnt:21406084 | 564.688 |