Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00230 CTCAAAATGCAGGCCTCGGGCTGCTTCTTCCTTCTCTCTCTTCTTCTTCTTTCGTATTCTTCTCTCTCTTTCGCTCTTACAGACGAGGAAGCTTCTTTCATTGCTAGTCGTCAGCTTCTTACCTTCCACGAGAATGGTGATTTGCCGGATAATTTCGAGTTTACCTTTACCTTGAACGTAACATTTGACAACAGCAGGCTTAGAAAAGCTTACATTGCTCTGCAAGAATGGAAGAAGGCCATTTTCTCCGACCCTTTTAACACTACTGGAAATTGGGTCGGAGCTGATGTTTGCTCTTACACTGGAGTTTTCTGCGCACCGGCTCTCGATGATCCTAATGTCACCGTCGTCGCCGGGATCGACATCAACCACGCTGACATCGCCGGCCACCTTCCGGTTGAGTTGGGCCTGTTGACAGATATCGCATTGTTTCACATTAATACCAACAGGTTTTGTGGAGTTATTCCGAAAAGTTTCTACAGGCTTACGCTTCTTCACGAGCTCGACGTCAGCAACAACCGCTTTGTCGGACCTTTTCCTACCGTCGTCCTCTCTATTCCAAATCTCCATTATCTTGATTTGAGGTTCAATGACTTCGAGGGTGAGTTGCCGCCGGAGCTTTTTGAGAAGGAACTAGACGCCATTTTCTTGAACAACAACAGGTTCACATCTACCATTCCGGAGAACTTCGGAAACTCTACGGCCTCGGTCGTCGTCGTTGCCAACAACCATCTGAAGGGATGTATTCCAAACAGCATTGGTAAAATGAAGAACACTCTCGACGAGATAATATTCTTGAACAACGAGCTCGGAGGGTGCTTGCCATCGGAGATTGGATTGCTCGGAAACGCGACTGTTCTGGATATTGCGTCGAACTCATTCACCGGAATCTTGCCCAAGACATTTACAGCTCTTGAAAAGATTGAACAGTTGGATATTTCTCACAATGTTTTGACTGGGTTTGTCTCGGGGAGTCTCTGCAAATTGCCCGGATTGGTTAACTTCACATACTCCCACAACTTCTTCAATGGTGCAGCAGTCGAATGCACGCCCTCATCGAAGAAGAACATTGCGTTTGACGATACCATTAACTGCTTGCCGCAGAGGCCGAAGCAAAGAGGTGAGAAAATTTGCAGTGAAGTGGTAAACAAGCCGGTGGATTGCATCTCCTTCGCCGCCAGTCTACTCACCTCCCCATCCGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCAGTTTATTCTTCTCCACCTCCGGTGAAATCTCCTCCTTCATCACCATTTATTCTTCTCCACCTCCGGTGA 2709 46.95 LKMQASGCFFLLSLLLLSYSSLSFALTDEEASFIASRQLLTFHENGDLPDNFEFTFTLNVTFDNSRLRKAYIALQEWKKAIFSDPFNTTGNWVGADVCSYTGVFCAPALDDPNVTVVAGIDINHADIAGHLPVELGLLTDIALFHINTNRFCGVIPKSFYRLTLLHELDVSNNRFVGPFPTVVLSIPNLHYLDLRFNDFEGELPPELFEKELDAIFLNNNRFTSTIPENFGNSTASVVVVANNHLKGCIPNSIGKMKNTLDEIIFLNNELGGCLPSEIGLLGNATVLDIASNSFTGILPKTFTALEKIEQLDISHNVLTGFVSGSLCKLPGLVNFTYSHNFFNGAAVECTPSSKKNIAFDDTINCLPQRPKQRGEKICSEVVNKPVDCISFAASLLTSPSVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPVYSSPPPVKSPPSSPFILLHLR 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1783340 1786446 + Bda016173.1 Bda03g00230 3489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 673 746 - -
Bda03g00230 902 SUPERFAMILY L domain-like 72 345 - -
Bda03g00230 902 MobiDBLite consensus disorder prediction 400 902 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 824 895 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 5 389 - -
Bda03g00230 902 Gene3D Ribonuclease Inhibitor 70 366 IPR032675 -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 764 836 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 398 461 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 614 686 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 5 389 - -
Bda03g00230 902 Pfam Leucine rich repeat 285 340 IPR001611 GO:0005515
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 764 836 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 398 461 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 780 851 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 554 626 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 450 521 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 495 566 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 554 626 - -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 719 791 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 780 851 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 824 895 - -
Bda03g00230 902 Pfam Leucine rich repeat N-terminal domain 73 105 IPR013210 -
Bda03g00230 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 450 521 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 673 746 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 614 686 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 495 566 - -
Bda03g00230 902 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 719 791 - -
Bda03g00230 902 MobiDBLite consensus disorder prediction 404 893 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00230 Bda-Chr3:1783340 Bda11g00593 Bda-Chr11:6051484 3.00E-120 dispersed
Bda03g00230 Bda-Chr3:1783340 Bda03g00124 Bda-Chr3:1080363 3.32E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00230 - - mnt:21406084 564.688