Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00241 ATGATTTTTTTGAAGGAAAAATTAAATTATTATTATAAAAGGATTGATTATTATTCAAGTGCATTGCAAAAAAGATCATTTTTCAAGTTGGTGATAATGGAGCTCCCTACTTCATCTTCAACGACCACCCTGGCTGGAGCTCTCTCATTTTTACTGCTTCTCTACTCTTTGATAAAGATATCGAGGAGAAGAAGCTTCAATCGGAAGAGACAACCCCCAGAAGCTGGCGGGGCGTGGCCTTTGATTGGTCATATGCACCTGCTCGGAGGAACAAAACCGGCTCACTTAACCTTGGCTGCTATGGCTGACAAATATGGGCCAATCTTTACTATGAGATTAGGTGTTCATAAAACTCTGATAGTTAGCAATTGGGAGATTGCCAAAGAGTGTTTTACTGTAAACGATCAAAATTTTGCCACTCGTCCAAAGCATTTAGCCTTTGAGCTCTTAGGCTACGACTATACCATGATAGGTTTCAGCCTTTATGGACCCGTCTGGCGCCAAGTGAGAAAAATAGCTACCGTCGAGCTACTTTCAAGCCAGCGTTTAGGGATGCTCAAACACATCAGGGAATCCGAGGTTCAGCTCTCCATTAGAGAGATGTATGATTCGTGGGTGGGAAAGAAAGACACTGATGAATATGGAGTGAAGGTGGAGATGAAGATGTGGTTTAGAGATGTTACTCTGAACATGATATTTAGGATGGTGGTGGGGAAGAGATTCACAGAGGCTTTTAAAGGTGAAAAAATGAACCACAGTATACGAGCCATCAGGGATCTCTTTGATCTAATCGGAGCATTTGTGCCAGCCGATTATTTCCCATTTCTGAGATGGTTGGATTTAGGAGGGTTCGAGAAGGCCATGAAAAAGACGGCAGAAGAAATGGATCAACTCATTGAAAACTGGCTTGACAAGCATAAGCAGAAGAGAAATGAGAAAAAGTCTAAAAGCGAGCAAGACTTGATGGATGTTATGCTAACCCTTTTCTACGACGGCCATCATGGTGGAGATGATTTCACTAGCAATCATGCCTCTGATAAGATTATCAAAGCTACTTGTTGGGCTCTGATATTAGCTGGCTCAGACTCGACCGTTGGGACAATGACTTGGACGCTCTGTTTACTTCTAAAAAACGAACGAGTCCTTAAAGAAGCCAAACGTGAGCTAGATGAACAAGTCGGGGACAATAGGCAAGTAAACGAATCTGATCTCAAAAACTTGGTTTACCTTAACGCAATCATAAAAGAGAGCATGCGTCTGTACCCGGTCGCCCCACTGGCGATTCCCCATGAATCCATGGAAGATTGTAATTTAGCCGGTCACCACATTCCTGCCGGAACGCGTCTAATGGTCAACTTGTGGAAGATGCAAAGAGACCCGAGAGTATGGAAGGAGCCAGAAGAGTTCCAACCGGAGAGATTTCTCACCACCCACAAGAACGTGGAGTTGAGCGGTCAGCATCATGAGTTAATGCCATTTGGAAGTGGGCGAAGAATGTGCCCTGGTGTTTCGTTGGCTCTGCAATCTATGTTGCTTTCAATGGCAGCTTTATTGCATGGGTTTGAAATATCGGCATTCTCAGAAGAAACTTTGGACATGCGTGAGAGCCCAGGTGTCACTAGCGTTAAAGAAACGCCTCTCGAGATATGTTTAAAACCACGCCTTGCTCCTCACCTCTATGCTTAA 1686 43.83 MIFLKEKLNYYYKRIDYYSSALQKRSFFKLVIMELPTSSSTTTLAGALSFLLLLYSLIKISRRRSFNRKRQPPEAGGAWPLIGHMHLLGGTKPAHLTLAAMADKYGPIFTMRLGVHKTLIVSNWEIAKECFTVNDQNFATRPKHLAFELLGYDYTMIGFSLYGPVWRQVRKIATVELLSSQRLGMLKHIRESEVQLSIREMYDSWVGKKDTDEYGVKVEMKMWFRDVTLNMIFRMVVGKRFTEAFKGEKMNHSIRAIRDLFDLIGAFVPADYFPFLRWLDLGGFEKAMKKTAEEMDQLIENWLDKHKQKRNEKKSKSEQDLMDVMLTLFYDGHHGGDDFTSNHASDKIIKATCWALILAGSDSTVGTMTWTLCLLLKNERVLKEAKRELDEQVGDNRQVNESDLKNLVYLNAIIKESMRLYPVAPLAIPHESMEDCNLAGHHIPAGTRLMVNLWKMQRDPRVWKEPEEFQPERFLTTHKNVELSGQHHELMPFGSGRRMCPGVSLALQSMLLSMAALLHGFEISAFSEETLDMRESPGVTSVKETPLEICLKPRLAPHLYA 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1928684 1930464 + Bda016184.1 Bda03g00241 3500

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00241 561 PANTHER CYTOCHROME P450 82C3-RELATED 69 560 - -
Bda03g00241 561 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 126 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 411 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 452 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 227 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS E-class P450 group I signature 348 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 SUPERFAMILY Cytochrome P450 78 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 Pfam Cytochrome P450 75 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS P450 superfamily signature 500 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 PANTHER CYTOCHROME P450 69 560 - -
Bda03g00241 561 Coils Coil 382 402 - -
Bda03g00241 561 Gene3D Cytochrome P450 56 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda03g00241 561 Coils Coil 281 319 - -
Bda03g00241 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00241 - - - qsu:112030939 588.571
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00241 Bda-Chr3:1928684 Bda07g00785 Bda-Chr7:9359278 1.39E-12 dispersed
Bda03g00239 Bda-Chr3:1895714 Bda03g00241 Bda-Chr3:1928684 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g858 . Blo12g00922 . Bda03g00241 . . Bma04g00191 . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1876 . . . Lsi04g01627 Csa03g04169 Chy04g00548 . . . . . . . . . . . Cmo09g00178 . . . . . . Bhi09g02057 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000018 15 22 15 12 7 19 2 17 20 14 15 18 14 11 26 20 19 10 1 20 12 9 8 16 8 19 17 19 17 20 442
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda03g00241 Bda_Chr03 FPKM 0.538226 0.54076 0.0 0.0 0.0 0.0 0.0 0.0 0.0