Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00242 | ATGCCTAACGAATTAGGTGCTAGTTTTAGGAAATTTCATGCCGCCAAAACGGCGTCGGAAAAGGTTATTGTTGCCGTGAAAGCTGAGAGAGCGATGTCCAAATCGGCACTAGCTTGGGCGCTCGCTCACGTTGTTCGTCCCGGAGATTGTGTTATTTTTCTCGCTGTGTTCTCCATTGATAAAACTGGGAGGAGATTTTTAAACTTTCCTTTATGGACCGGAGATTGTGGAAGCGGCGGACCGGAGGAGCTGCCGGATCGGATTTGCGAGATCTCAGAATCTTGTTCGCAGATGGTGCTTCAGTATAGTAGCCAAGTAGAGATCAAAGTGAGGATTAAGGTCGTATCAAGTTCATGTAGGGGCGCTGTTGCGGCTGAGGCAAAGACCAACAAAGTCAACTGGGTCGTACTGGACAAAAAACTAAAGCAGGAGGTGAAGTACTGCATTGAAGATCTAAACTGCAATATTGTAACAATGAAGGGATCTGAACCACAAATTTTAAGGCTTAATTTGGGATGCTCAAATGAACCATCAACTCCCTTCTTTTCTGCTCTTTCTTCGCCAGGTGTGGATATAGCAAAGATACCATCACAGAGGATGAACCAGTCTACACCTGCCAGCAGCCCAGATGAACCTAGTACTTCAGATACAAGAACCTCAAGGGAAGGTTCTTTGTCTAGCTTCGACACAATTAATTCTCCTTACCTCCTATATGAGGAAAATCCTCTGTTTGAAGGACCTTTCGGACGAAAATACTCAGCCATTGAGAAATACGAAGTTACAAGTAGGTCACTAAACCCACCAGACTCAATTGGTGAAAAAGTGATCTCCCTGTCCGCTGCCCCAACATCAGTCATATCTGCTAGGCAGAAAAGTGCTTACTATATCCCTCAGAACCATATTGTCAATGGAAACTGTCAAGTGTACCAAGACAAAAGAAATTCTCAAACAACTATATCTTTGATTGCTAAACCTTCACAAGGTCAACACATGTCCGAGAGTAATGAAGGTGTTTGGCTCAACCATCCCTATAGCAAAGATGAAATGAACTCCAACATCAGGGATGCTGTCTCCTTAGGTAAAATATCCTCAATACCCCCACCTTTATGCTCTATATGTCAACACAAAACTCCAGCTTTTGGTAAACCTCCGAGAAAATTCTCTTACAAAGAGCTACTGCTAGCTACAGACGGGTTCTCAAACTTAAATTTCTTGGCCAAAGGTGGTTTTGGCATTGTGTACAGAGGGGTATTGAGGGATGGCCAGGTTGTAGCAGTGAAGCAGTTGAAGTGTGAAGGTTTTCAAGCAGAAACTGATTTCTGTAGGGAAGTACGGGTTCTAAGCTGTGCGCAACATAGAAATGTTGTATTGCTAATTGGGTTTTGCATTGAGAGCACGACAAGGCTATTGGTATATGAATACATATGCAATCATTCCTTGGACTTCCATTTACACGAATCAAGAACTCGTTTAGATTGGCAGTCACGGGTTCGGATTGCAATAGGTGCCGCTCGTGGCTTAAGATATCTTCATGAAGATTGTAGAGTGGGTTGTATTGTGCACAAAGACTTGCGACCCAAGAACATACTCCTGACACACGATTTTGAACCTCTGATTACTGATTTTGGGCTAGCCAGACAGCACTCTGAATGGGCCATGAATGAAGATGATGGAGTGATTGGAACGTCAGGGTATCTTGCTCCAGAGTACATCAATGGTGGAATGATTTCACACAAAGTTGATGTGTACGCATTTGGAGTAGTTTTATTGGAACTTATAACGGGTCGAAGAATCAGTGAGCTTAAAAGTTTGGAGGGAAAGCTATTCATATATGATTGCTATCACCCTCTATCTGCTACACGAATGAACGATTTACTTGGAAATGGTTACCAATTTCTGGATTCGAACTTGATCTCTGACCAGCCCCCTGATTTCCCTCATCAACTACAGGCTATGACCCAAGCTGCTTCCATGTGTTTACGTCAAGATCCAGAATTGAGACCACCAATGTCTAAGATTCTTAGAGTGTTAGAAGGAGGAGATCCAACTATTGCTCTTGGTTTAGACTTGGATTCAGTTGGTTGTAGAAGTGGCCATTTGAGAGGTCTCCCCTCCTCTGCGCGAATTGAAGCAAAAAGAAGCCATTCTCGCAAGCTGTCCCACTAG | 2166 | 43.49 | MPNELGASFRKFHAAKTASEKVIVAVKAERAMSKSALAWALAHVVRPGDCVIFLAVFSIDKTGRRFLNFPLWTGDCGSGGPEELPDRICEISESCSQMVLQYSSQVEIKVRIKVVSSSCRGAVAAEAKTNKVNWVVLDKKLKQEVKYCIEDLNCNIVTMKGSEPQILRLNLGCSNEPSTPFFSALSSPGVDIAKIPSQRMNQSTPASSPDEPSTSDTRTSREGSLSSFDTINSPYLLYEENPLFEGPFGRKYSAIEKYEVTSRSLNPPDSIGEKVISLSAAPTSVISARQKSAYYIPQNHIVNGNCQVYQDKRNSQTTISLIAKPSQGQHMSESNEGVWLNHPYSKDEMNSNIRDAVSLGKISSIPPPLCSICQHKTPAFGKPPRKFSYKELLLATDGFSNLNFLAKGGFGIVYRGVLRDGQVVAVKQLKCEGFQAETDFCREVRVLSCAQHRNVVLLIGFCIESTTRLLVYEYICNHSLDFHLHESRTRLDWQSRVRIAIGAARGLRYLHEDCRVGCIVHKDLRPKNILLTHDFEPLITDFGLARQHSEWAMNEDDGVIGTSGYLAPEYINGGMISHKVDVYAFGVVLLELITGRRISELKSLEGKLFIYDCYHPLSATRMNDLLGNGYQFLDSNLISDQPPDFPHQLQAMTQAASMCLRQDPELRPPMSKILRVLEGGDPTIALGLDLDSVGCRSGHLRGLPSSARIEAKRSHSRKLSH | 721 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1931658 | 1935534 | + | Bda016185.1 | Bda03g00242 | 3501 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00242 | 721 | PANTHER | OS01G0253100 PROTEIN | 17 | 710 | IPR045271 | GO:0004714|GO:0006468 | |
Bda03g00242 | 721 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 519 | 531 | IPR008266 | GO:0004672|GO:0006468 | |
Bda03g00242 | 721 | Gene3D | Transferase(Phosphotransferase) domain 1 | 476 | 683 | - | - | |
Bda03g00242 | 721 | Pfam | Protein tyrosine and serine/threonine kinase | 404 | 676 | IPR001245 | GO:0004672|GO:0006468 | |
Bda03g00242 | 721 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE | 17 | 710 | - | - | |
Bda03g00242 | 721 | Gene3D | Phosphorylase Kinase; domain 1 | 370 | 474 | - | - | |
Bda03g00242 | 721 | MobiDBLite | consensus disorder prediction | 198 | 227 | - | - | |
Bda03g00242 | 721 | SUPERFAMILY | Protein kinase-like (PK-like) | 380 | 677 | IPR011009 | - | |
Bda03g00242 | 721 | CDD | STKc_IRAK | 405 | 679 | - | - | |
Bda03g00242 | 721 | ProSiteProfiles | Protein kinase domain profile. | 399 | 684 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00242 | Bda-Chr3:1931658 | Bda12g01075 | Bda-Chr12:42471649 | 0 | dispersed | |
Bda03g00242 | Bda-Chr3:1931658 | Bda03g00245 | Bda-Chr3:2212509 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69524 | PF07714 | PK_Tyr_Ser-Thr | 1.00E-42 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00242 | - | - | zju:107420222 | 879.011 |