Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00242 ATGCCTAACGAATTAGGTGCTAGTTTTAGGAAATTTCATGCCGCCAAAACGGCGTCGGAAAAGGTTATTGTTGCCGTGAAAGCTGAGAGAGCGATGTCCAAATCGGCACTAGCTTGGGCGCTCGCTCACGTTGTTCGTCCCGGAGATTGTGTTATTTTTCTCGCTGTGTTCTCCATTGATAAAACTGGGAGGAGATTTTTAAACTTTCCTTTATGGACCGGAGATTGTGGAAGCGGCGGACCGGAGGAGCTGCCGGATCGGATTTGCGAGATCTCAGAATCTTGTTCGCAGATGGTGCTTCAGTATAGTAGCCAAGTAGAGATCAAAGTGAGGATTAAGGTCGTATCAAGTTCATGTAGGGGCGCTGTTGCGGCTGAGGCAAAGACCAACAAAGTCAACTGGGTCGTACTGGACAAAAAACTAAAGCAGGAGGTGAAGTACTGCATTGAAGATCTAAACTGCAATATTGTAACAATGAAGGGATCTGAACCACAAATTTTAAGGCTTAATTTGGGATGCTCAAATGAACCATCAACTCCCTTCTTTTCTGCTCTTTCTTCGCCAGGTGTGGATATAGCAAAGATACCATCACAGAGGATGAACCAGTCTACACCTGCCAGCAGCCCAGATGAACCTAGTACTTCAGATACAAGAACCTCAAGGGAAGGTTCTTTGTCTAGCTTCGACACAATTAATTCTCCTTACCTCCTATATGAGGAAAATCCTCTGTTTGAAGGACCTTTCGGACGAAAATACTCAGCCATTGAGAAATACGAAGTTACAAGTAGGTCACTAAACCCACCAGACTCAATTGGTGAAAAAGTGATCTCCCTGTCCGCTGCCCCAACATCAGTCATATCTGCTAGGCAGAAAAGTGCTTACTATATCCCTCAGAACCATATTGTCAATGGAAACTGTCAAGTGTACCAAGACAAAAGAAATTCTCAAACAACTATATCTTTGATTGCTAAACCTTCACAAGGTCAACACATGTCCGAGAGTAATGAAGGTGTTTGGCTCAACCATCCCTATAGCAAAGATGAAATGAACTCCAACATCAGGGATGCTGTCTCCTTAGGTAAAATATCCTCAATACCCCCACCTTTATGCTCTATATGTCAACACAAAACTCCAGCTTTTGGTAAACCTCCGAGAAAATTCTCTTACAAAGAGCTACTGCTAGCTACAGACGGGTTCTCAAACTTAAATTTCTTGGCCAAAGGTGGTTTTGGCATTGTGTACAGAGGGGTATTGAGGGATGGCCAGGTTGTAGCAGTGAAGCAGTTGAAGTGTGAAGGTTTTCAAGCAGAAACTGATTTCTGTAGGGAAGTACGGGTTCTAAGCTGTGCGCAACATAGAAATGTTGTATTGCTAATTGGGTTTTGCATTGAGAGCACGACAAGGCTATTGGTATATGAATACATATGCAATCATTCCTTGGACTTCCATTTACACGAATCAAGAACTCGTTTAGATTGGCAGTCACGGGTTCGGATTGCAATAGGTGCCGCTCGTGGCTTAAGATATCTTCATGAAGATTGTAGAGTGGGTTGTATTGTGCACAAAGACTTGCGACCCAAGAACATACTCCTGACACACGATTTTGAACCTCTGATTACTGATTTTGGGCTAGCCAGACAGCACTCTGAATGGGCCATGAATGAAGATGATGGAGTGATTGGAACGTCAGGGTATCTTGCTCCAGAGTACATCAATGGTGGAATGATTTCACACAAAGTTGATGTGTACGCATTTGGAGTAGTTTTATTGGAACTTATAACGGGTCGAAGAATCAGTGAGCTTAAAAGTTTGGAGGGAAAGCTATTCATATATGATTGCTATCACCCTCTATCTGCTACACGAATGAACGATTTACTTGGAAATGGTTACCAATTTCTGGATTCGAACTTGATCTCTGACCAGCCCCCTGATTTCCCTCATCAACTACAGGCTATGACCCAAGCTGCTTCCATGTGTTTACGTCAAGATCCAGAATTGAGACCACCAATGTCTAAGATTCTTAGAGTGTTAGAAGGAGGAGATCCAACTATTGCTCTTGGTTTAGACTTGGATTCAGTTGGTTGTAGAAGTGGCCATTTGAGAGGTCTCCCCTCCTCTGCGCGAATTGAAGCAAAAAGAAGCCATTCTCGCAAGCTGTCCCACTAG 2166 43.49 MPNELGASFRKFHAAKTASEKVIVAVKAERAMSKSALAWALAHVVRPGDCVIFLAVFSIDKTGRRFLNFPLWTGDCGSGGPEELPDRICEISESCSQMVLQYSSQVEIKVRIKVVSSSCRGAVAAEAKTNKVNWVVLDKKLKQEVKYCIEDLNCNIVTMKGSEPQILRLNLGCSNEPSTPFFSALSSPGVDIAKIPSQRMNQSTPASSPDEPSTSDTRTSREGSLSSFDTINSPYLLYEENPLFEGPFGRKYSAIEKYEVTSRSLNPPDSIGEKVISLSAAPTSVISARQKSAYYIPQNHIVNGNCQVYQDKRNSQTTISLIAKPSQGQHMSESNEGVWLNHPYSKDEMNSNIRDAVSLGKISSIPPPLCSICQHKTPAFGKPPRKFSYKELLLATDGFSNLNFLAKGGFGIVYRGVLRDGQVVAVKQLKCEGFQAETDFCREVRVLSCAQHRNVVLLIGFCIESTTRLLVYEYICNHSLDFHLHESRTRLDWQSRVRIAIGAARGLRYLHEDCRVGCIVHKDLRPKNILLTHDFEPLITDFGLARQHSEWAMNEDDGVIGTSGYLAPEYINGGMISHKVDVYAFGVVLLELITGRRISELKSLEGKLFIYDCYHPLSATRMNDLLGNGYQFLDSNLISDQPPDFPHQLQAMTQAASMCLRQDPELRPPMSKILRVLEGGDPTIALGLDLDSVGCRSGHLRGLPSSARIEAKRSHSRKLSH 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1931658 1935534 + Bda016185.1 Bda03g00242 3501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00242 721 PANTHER OS01G0253100 PROTEIN 17 710 IPR045271 GO:0004714|GO:0006468
Bda03g00242 721 ProSitePatterns Tyrosine protein kinases specific active-site signature. 519 531 IPR008266 GO:0004672|GO:0006468
Bda03g00242 721 Gene3D Transferase(Phosphotransferase) domain 1 476 683 - -
Bda03g00242 721 Pfam Protein tyrosine and serine/threonine kinase 404 676 IPR001245 GO:0004672|GO:0006468
Bda03g00242 721 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 710 - -
Bda03g00242 721 Gene3D Phosphorylase Kinase; domain 1 370 474 - -
Bda03g00242 721 MobiDBLite consensus disorder prediction 198 227 - -
Bda03g00242 721 SUPERFAMILY Protein kinase-like (PK-like) 380 677 IPR011009 -
Bda03g00242 721 CDD STKc_IRAK 405 679 - -
Bda03g00242 721 ProSiteProfiles Protein kinase domain profile. 399 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00242 Bda-Chr3:1931658 Bda12g01075 Bda-Chr12:42471649 0 dispersed
Bda03g00242 Bda-Chr3:1931658 Bda03g00245 Bda-Chr3:2212509 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69524 PF07714 PK_Tyr_Ser-Thr 1.00E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00242 - - zju:107420222 879.011