Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00245 | TCTTACAGTTTCAGAGGTTCTGAGGAATTCTGGATTTCGACGGGGAAGATGCCTAACGAATTAGGTGCTAGTTTTAGGAAATTTCATGCCGCCAAAACGGCGTCGGAAAAGGTTATTGTTGCCGTGAAAGCTGAGAGAGCGATGTCCAAATCGGCACTAGCTTGGGCGCTCGCTCACGTTGTTCGTCCCGGAGATTGTGTTATTTTTCTCGCTGTGTTCTCCATTGATAAAACTGGGAGGAGATTTTTAAACTTTCCTTTATGGACCGGAGATTGTGGAAGCGGCGGACCGGAGGAGCTGCCGGATCGGATCAAAGTGAGGATTAAGGTCGTATCAAGTTCATGTAGGGGCGCTGTTGCGGCTGAGGCAAAGACCAACAAAGTCAACTGGGTCGTACTGGACAAAAAACTAAAGCAGGAGGTGAAGTACTGCATTGAAGATCTAAACTGCAATATTGTAACAATGAAGGGATCTGAACCACAAATTTTAAGGCTTAATTTGGGATGCTCAAATGAACCATCAACTCCCTTCTTTTCTGCTCTTTCTTCGCCAGGTGTGGATATAGCAAAGATACCATCACAGAGGATGAACCAGTCTACACCTGCGAGCAGCCCAGATGAACCTAGTACTTCAGATACAAGAACCTCAAGGGAAGGTTCTTTGTCTAGCTTCGACACAATTAATTCTCCTTACCTCCTATATGAGGAAAATCCTCTGTTTGAAGGACCTTTCAGACGAAAATACTCAGCCATTGAGAAATACGAAGTTACAAGTAGGTCACTAAACCCACTACACTCAATTGGTGAAAAAGTGATTTCCCTGTCCGCTGCCCCAACATCAGTCATATCTTCTAGGCAGAAAAGTGCTTACTATATCCCTCAGAACCATATTGTCAATGGAAACTGTCAAGTGTACCAAGACAAAAGAAATTCTCAAACAACTATATCTTTGATTGCTAAACCTTCACAAGGTCAACATGTGTCCGAGAGTAATGAAGGTGTTTTTCTCAACCATCCGTATAGCAAAGATGAAATGAACTCCAACATCAGGGATGCTGTCTCCTTAGGTAAAATATCCTCAATACCCCCACCTTTATGCTCTATATGTCAACACAAAACTCCAGCTTTTGGTAAACCTCCGAGAAAATTCTCTTACAAAGAGCTACTGCTAGCTACAGACGGGTTCTCAAACTTAAATTTCTTGGCCAAAGGTGGTTTTGGCATTGTGTACAGAGGGGTATTGAGGGATGGCCAGGTTGTAGCAGTGAAGCAGTTGAAGTGTGAAGGTTTTCAAGCAGAAACTGATTTCTGTAGGGAAGTACGGGTTCTAAGCTGTGCGCAACATAGAAATGTTGTATTGCTAATTGGGTTTTGCATTGAGAGCACGACAAGGCTATTGGTATATGAATACATATGCAATCATTCCTTGGACTTCCATTTACACGAATCAAGAACCCGTTTAGATTGGCAGTCGCAGGTCAGGATTGCAATAGGTGCCGCTCGTGGCTTAAGATATCTTCATGAAGATTGTAGAGTGGGTTGTATTGTGCACAAAGACTTGCGACCCAAGAATATACTCCTGACACATGATTTTGAACCGCTGATTACTGATTTTGGGCTAGCCAGACAGCACTCTGAATGGGCCATGAATGAAGATGATGGAGTGATTGGAACGTCAGGGTATCTTGCTCCAGAGTACATCAATGGTGGAATGATTTCACACAAAGTTGATGTGTACGCATTTGGAGTAGTTTTATTGGAACTTATAACGGGTCGAAGAATCAGTGAGCTTAAAAGTTTGGAGGGAAAGCTATTCACATATGATTGCTATCACCCTCTATCTGCTACACGAATGAACGATTTACTTGGAAATGGTTACCAATTTCTGGATTCGAACGTGATCTCTGACCAGCCTCCTGATTTCCCTCATCAACTACAGGCTATGACCCAAGCTGCTTCCATGTGTTTACGTCAAGATCCAGAATTGAGACCACCAATGTCTAAGATTCTTAGAGTGTTAGAAGGAGGAGATCCAACTATTGCTCTTGGTTTAGACTTGGATTCAGTTGGTTGTAGAAGTGGCCATTTGAGAGGTCTCCCCTCCTCTGCGCCAATTGAAGCAAAAAGAAGCCATTCTCGCAAGCTGTCCCACTAG | 2154 | 43.31 | SYSFRGSEEFWISTGKMPNELGASFRKFHAAKTASEKVIVAVKAERAMSKSALAWALAHVVRPGDCVIFLAVFSIDKTGRRFLNFPLWTGDCGSGGPEELPDRIKVRIKVVSSSCRGAVAAEAKTNKVNWVVLDKKLKQEVKYCIEDLNCNIVTMKGSEPQILRLNLGCSNEPSTPFFSALSSPGVDIAKIPSQRMNQSTPASSPDEPSTSDTRTSREGSLSSFDTINSPYLLYEENPLFEGPFRRKYSAIEKYEVTSRSLNPLHSIGEKVISLSAAPTSVISSRQKSAYYIPQNHIVNGNCQVYQDKRNSQTTISLIAKPSQGQHVSESNEGVFLNHPYSKDEMNSNIRDAVSLGKISSIPPPLCSICQHKTPAFGKPPRKFSYKELLLATDGFSNLNFLAKGGFGIVYRGVLRDGQVVAVKQLKCEGFQAETDFCREVRVLSCAQHRNVVLLIGFCIESTTRLLVYEYICNHSLDFHLHESRTRLDWQSQVRIAIGAARGLRYLHEDCRVGCIVHKDLRPKNILLTHDFEPLITDFGLARQHSEWAMNEDDGVIGTSGYLAPEYINGGMISHKVDVYAFGVVLLELITGRRISELKSLEGKLFTYDCYHPLSATRMNDLLGNGYQFLDSNVISDQPPDFPHQLQAMTQAASMCLRQDPELRPPMSKILRVLEGGDPTIALGLDLDSVGCRSGHLRGLPSSAPIEAKRSHSRKLSH | 717 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2212509 | 2216432 | + | Bda016201.1 | Bda03g00245 | 3504 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00245 | 717 | PANTHER | OS01G0253100 PROTEIN | 104 | 706 | IPR045271 | GO:0004714|GO:0006468 | |
Bda03g00245 | 717 | Gene3D | Phosphorylase Kinase; domain 1 | 366 | 470 | - | - | |
Bda03g00245 | 717 | ProSiteProfiles | Protein kinase domain profile. | 395 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g00245 | 717 | Gene3D | Transferase(Phosphotransferase) domain 1 | 472 | 679 | - | - | |
Bda03g00245 | 717 | SUPERFAMILY | Protein kinase-like (PK-like) | 376 | 673 | IPR011009 | - | |
Bda03g00245 | 717 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE | 104 | 706 | - | - | |
Bda03g00245 | 717 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE | 32 | 104 | - | - | |
Bda03g00245 | 717 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 515 | 527 | IPR008266 | GO:0004672|GO:0006468 | |
Bda03g00245 | 717 | MobiDBLite | consensus disorder prediction | 194 | 223 | - | - | |
Bda03g00245 | 717 | Pfam | Protein tyrosine and serine/threonine kinase | 400 | 672 | IPR001245 | GO:0004672|GO:0006468 | |
Bda03g00245 | 717 | CDD | STKc_IRAK | 401 | 675 | - | - | |
Bda03g00245 | 717 | PANTHER | OS01G0253100 PROTEIN | 32 | 104 | IPR045271 | GO:0004714|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00245 | Bda-Chr3:2212509 | Bda12g01075 | Bda-Chr12:42471649 | 6.16E-176 | dispersed | |
Bda03g00242 | Bda-Chr3:1931658 | Bda03g00245 | Bda-Chr3:2212509 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69525 | PF07714 | PK_Tyr_Ser-Thr | 9.10E-43 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00245 | - | - | zju:107420222 | 839.336 |