Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00245 TCTTACAGTTTCAGAGGTTCTGAGGAATTCTGGATTTCGACGGGGAAGATGCCTAACGAATTAGGTGCTAGTTTTAGGAAATTTCATGCCGCCAAAACGGCGTCGGAAAAGGTTATTGTTGCCGTGAAAGCTGAGAGAGCGATGTCCAAATCGGCACTAGCTTGGGCGCTCGCTCACGTTGTTCGTCCCGGAGATTGTGTTATTTTTCTCGCTGTGTTCTCCATTGATAAAACTGGGAGGAGATTTTTAAACTTTCCTTTATGGACCGGAGATTGTGGAAGCGGCGGACCGGAGGAGCTGCCGGATCGGATCAAAGTGAGGATTAAGGTCGTATCAAGTTCATGTAGGGGCGCTGTTGCGGCTGAGGCAAAGACCAACAAAGTCAACTGGGTCGTACTGGACAAAAAACTAAAGCAGGAGGTGAAGTACTGCATTGAAGATCTAAACTGCAATATTGTAACAATGAAGGGATCTGAACCACAAATTTTAAGGCTTAATTTGGGATGCTCAAATGAACCATCAACTCCCTTCTTTTCTGCTCTTTCTTCGCCAGGTGTGGATATAGCAAAGATACCATCACAGAGGATGAACCAGTCTACACCTGCGAGCAGCCCAGATGAACCTAGTACTTCAGATACAAGAACCTCAAGGGAAGGTTCTTTGTCTAGCTTCGACACAATTAATTCTCCTTACCTCCTATATGAGGAAAATCCTCTGTTTGAAGGACCTTTCAGACGAAAATACTCAGCCATTGAGAAATACGAAGTTACAAGTAGGTCACTAAACCCACTACACTCAATTGGTGAAAAAGTGATTTCCCTGTCCGCTGCCCCAACATCAGTCATATCTTCTAGGCAGAAAAGTGCTTACTATATCCCTCAGAACCATATTGTCAATGGAAACTGTCAAGTGTACCAAGACAAAAGAAATTCTCAAACAACTATATCTTTGATTGCTAAACCTTCACAAGGTCAACATGTGTCCGAGAGTAATGAAGGTGTTTTTCTCAACCATCCGTATAGCAAAGATGAAATGAACTCCAACATCAGGGATGCTGTCTCCTTAGGTAAAATATCCTCAATACCCCCACCTTTATGCTCTATATGTCAACACAAAACTCCAGCTTTTGGTAAACCTCCGAGAAAATTCTCTTACAAAGAGCTACTGCTAGCTACAGACGGGTTCTCAAACTTAAATTTCTTGGCCAAAGGTGGTTTTGGCATTGTGTACAGAGGGGTATTGAGGGATGGCCAGGTTGTAGCAGTGAAGCAGTTGAAGTGTGAAGGTTTTCAAGCAGAAACTGATTTCTGTAGGGAAGTACGGGTTCTAAGCTGTGCGCAACATAGAAATGTTGTATTGCTAATTGGGTTTTGCATTGAGAGCACGACAAGGCTATTGGTATATGAATACATATGCAATCATTCCTTGGACTTCCATTTACACGAATCAAGAACCCGTTTAGATTGGCAGTCGCAGGTCAGGATTGCAATAGGTGCCGCTCGTGGCTTAAGATATCTTCATGAAGATTGTAGAGTGGGTTGTATTGTGCACAAAGACTTGCGACCCAAGAATATACTCCTGACACATGATTTTGAACCGCTGATTACTGATTTTGGGCTAGCCAGACAGCACTCTGAATGGGCCATGAATGAAGATGATGGAGTGATTGGAACGTCAGGGTATCTTGCTCCAGAGTACATCAATGGTGGAATGATTTCACACAAAGTTGATGTGTACGCATTTGGAGTAGTTTTATTGGAACTTATAACGGGTCGAAGAATCAGTGAGCTTAAAAGTTTGGAGGGAAAGCTATTCACATATGATTGCTATCACCCTCTATCTGCTACACGAATGAACGATTTACTTGGAAATGGTTACCAATTTCTGGATTCGAACGTGATCTCTGACCAGCCTCCTGATTTCCCTCATCAACTACAGGCTATGACCCAAGCTGCTTCCATGTGTTTACGTCAAGATCCAGAATTGAGACCACCAATGTCTAAGATTCTTAGAGTGTTAGAAGGAGGAGATCCAACTATTGCTCTTGGTTTAGACTTGGATTCAGTTGGTTGTAGAAGTGGCCATTTGAGAGGTCTCCCCTCCTCTGCGCCAATTGAAGCAAAAAGAAGCCATTCTCGCAAGCTGTCCCACTAG 2154 43.31 SYSFRGSEEFWISTGKMPNELGASFRKFHAAKTASEKVIVAVKAERAMSKSALAWALAHVVRPGDCVIFLAVFSIDKTGRRFLNFPLWTGDCGSGGPEELPDRIKVRIKVVSSSCRGAVAAEAKTNKVNWVVLDKKLKQEVKYCIEDLNCNIVTMKGSEPQILRLNLGCSNEPSTPFFSALSSPGVDIAKIPSQRMNQSTPASSPDEPSTSDTRTSREGSLSSFDTINSPYLLYEENPLFEGPFRRKYSAIEKYEVTSRSLNPLHSIGEKVISLSAAPTSVISSRQKSAYYIPQNHIVNGNCQVYQDKRNSQTTISLIAKPSQGQHVSESNEGVFLNHPYSKDEMNSNIRDAVSLGKISSIPPPLCSICQHKTPAFGKPPRKFSYKELLLATDGFSNLNFLAKGGFGIVYRGVLRDGQVVAVKQLKCEGFQAETDFCREVRVLSCAQHRNVVLLIGFCIESTTRLLVYEYICNHSLDFHLHESRTRLDWQSQVRIAIGAARGLRYLHEDCRVGCIVHKDLRPKNILLTHDFEPLITDFGLARQHSEWAMNEDDGVIGTSGYLAPEYINGGMISHKVDVYAFGVVLLELITGRRISELKSLEGKLFTYDCYHPLSATRMNDLLGNGYQFLDSNVISDQPPDFPHQLQAMTQAASMCLRQDPELRPPMSKILRVLEGGDPTIALGLDLDSVGCRSGHLRGLPSSAPIEAKRSHSRKLSH 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2212509 2216432 + Bda016201.1 Bda03g00245 3504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00245 717 PANTHER OS01G0253100 PROTEIN 104 706 IPR045271 GO:0004714|GO:0006468
Bda03g00245 717 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Bda03g00245 717 ProSiteProfiles Protein kinase domain profile. 395 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g00245 717 Gene3D Transferase(Phosphotransferase) domain 1 472 679 - -
Bda03g00245 717 SUPERFAMILY Protein kinase-like (PK-like) 376 673 IPR011009 -
Bda03g00245 717 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 104 706 - -
Bda03g00245 717 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 32 104 - -
Bda03g00245 717 ProSitePatterns Tyrosine protein kinases specific active-site signature. 515 527 IPR008266 GO:0004672|GO:0006468
Bda03g00245 717 MobiDBLite consensus disorder prediction 194 223 - -
Bda03g00245 717 Pfam Protein tyrosine and serine/threonine kinase 400 672 IPR001245 GO:0004672|GO:0006468
Bda03g00245 717 CDD STKc_IRAK 401 675 - -
Bda03g00245 717 PANTHER OS01G0253100 PROTEIN 32 104 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00245 Bda-Chr3:2212509 Bda12g01075 Bda-Chr12:42471649 6.16E-176 dispersed
Bda03g00242 Bda-Chr3:1931658 Bda03g00245 Bda-Chr3:2212509 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69525 PF07714 PK_Tyr_Ser-Thr 9.10E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00245 - - zju:107420222 839.336