Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g00290 | ATGGCCGTCGCAGCTTTTTTACCTCTCCCCGATCAACATTTAGAGCCCAAAAACCACCTTTCGAAAAGAAAATGCAAGCAGCAAAAGCCATCTTCTTCTTCTTCTTCTTCGTGGAATCAAATAAAGAACCTTCTCACCTGTAAACAGATCGAAGGAACCAAAGTTCATGACCCATCAAAGATCCCATCAGCCACGTCCAAAGTCGGGTATACGTGTAGCTCCATCTGTAGCTTCAAGGATGTCATTCATGGCAACACTAAGGTCGTACACAGAGCTGATAACTCGCCGGTGAGTAGCTCGGTGGGTCAGGAAGCCAGTTCACTCAGTCGAAAAGGTACAAATGGACAGTCGACTCGGTCTGTCTCGAGATCCATAAATGGTTCAACTCGAGGAATGCAATTGAGAAAGCTTTCTGGCTGTTACGAATGTCATGCCATTGTCGACCCAAGCAGATACCCTGTTGCGAGAACTACCATTTGTTCTTGTTCTAAGTGTGGAGAGGTCTTCCCAAAGATGGAAAGCTTGGAACTTCACCTAGCATTTCGCCATGCCGTATCGGAGCTGGGGCCGGAAGATTCGGGTCGTAATATAGTGGAGATCATTTTCAAATCAAGCTGGCTCAAAAAGGATAGTACAGTATTCCAAATCGAACGGATATTAAAGGTCCAGAACACCCAGCGAACAATCCAACGTTTCGAAGACTGCCGAGACGCAGTAAAGACACGTGCGCTCAACAGTAGCAGAAAAAACCCTAGGTGCGCTGCCGATGGAAACGAGCTACTGAGGTTCCATTGCACCAGTTTATCGTGCGCGCTAGGCGCACGTGGATCGTCCAGCTTGTGCGGCTCCGTTCCAGGCTGTGGAGTCTGCACTATCATACGCCACGGCTTTGAAGGAAAAACGGAAGAGGGGGTGCGAACCACAGCTTGCAGCGGTAGGGCGCACGACCTGTGGAGCTGTACAGAAGGAAGGACTCGGAGGGCGATGCTGGTGTGTCGTGTCATCGCCGGAAGGGTGAGGCGCGTCGACGGAGATGCGGTGGACCAGGAGGAGGCCGTGCCTCCTGGGTCGTATGATTCTGTATCTGGACAAGCTGGCGTGTACTCCAATCTCGAGGAGTTGATTGTCTTCAATCCCAAGGCTATCCTTCCTTGTTTTGTAGTTATTTACGCTGCGCTGGAGTCCTAG | 1188 | 50.42 | MAVAAFLPLPDQHLEPKNHLSKRKCKQQKPSSSSSSSWNQIKNLLTCKQIEGTKVHDPSKIPSATSKVGYTCSSICSFKDVIHGNTKVVHRADNSPVSSSVGQEASSLSRKGTNGQSTRSVSRSINGSTRGMQLRKLSGCYECHAIVDPSRYPVARTTICSCSKCGEVFPKMESLELHLAFRHAVSELGPEDSGRNIVEIIFKSSWLKKDSTVFQIERILKVQNTQRTIQRFEDCRDAVKTRALNSSRKNPRCAADGNELLRFHCTSLSCALGARGSSSLCGSVPGCGVCTIIRHGFEGKTEEGVRTTACSGRAHDLWSCTEGRTRRAMLVCRVIAGRVRRVDGDAVDQEEAVPPGSYDSVSGQAGVYSNLEELIVFNPKAILPCFVVIYAALES | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2522305 | 2523980 | + | Bda016247.1 | Bda03g00290 | 3549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g00290 | 395 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 27 | 394 | - | - | |
Bda03g00290 | 395 | MobiDBLite | consensus disorder prediction | 92 | 124 | - | - | |
Bda03g00290 | 395 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 160 | 183 | IPR013087 | - | |
Bda03g00290 | 395 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 27 | 394 | - | - | |
Bda03g00290 | 395 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 160 | 188 | IPR013087 | - | |
Bda03g00290 | 395 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bda03g00290 | 395 | Gene3D | - | 184 | 391 | - | - | |
Bda03g00290 | 395 | SUPERFAMILY | ADP-ribosylation | 185 | 391 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00290 | Bda08g01222 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01412 | Bda-Chr1:50041254 | Bda03g00290 | Bda-Chr3:2522305 | 2.38E-79 | dispersed | |
Bda03g00290 | Bda-Chr3:2522305 | Bda03g00523 | Bda-Chr3:4373738 | 3.59E-103 | dispersed | |
Bda07g00004 | Bda-Chr7:48102 | Bda03g00290 | Bda-Chr3:2522305 | 8.91E-36 | transposed | |
Bda03g00290 | Bda-Chr3:2522305 | Bda08g01222 | Bda-Chr8:50076592 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15634 | None | None | None | None | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g00290 | - | - | zju:107435832 | 574.318 |