Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g00290 ATGGCCGTCGCAGCTTTTTTACCTCTCCCCGATCAACATTTAGAGCCCAAAAACCACCTTTCGAAAAGAAAATGCAAGCAGCAAAAGCCATCTTCTTCTTCTTCTTCTTCGTGGAATCAAATAAAGAACCTTCTCACCTGTAAACAGATCGAAGGAACCAAAGTTCATGACCCATCAAAGATCCCATCAGCCACGTCCAAAGTCGGGTATACGTGTAGCTCCATCTGTAGCTTCAAGGATGTCATTCATGGCAACACTAAGGTCGTACACAGAGCTGATAACTCGCCGGTGAGTAGCTCGGTGGGTCAGGAAGCCAGTTCACTCAGTCGAAAAGGTACAAATGGACAGTCGACTCGGTCTGTCTCGAGATCCATAAATGGTTCAACTCGAGGAATGCAATTGAGAAAGCTTTCTGGCTGTTACGAATGTCATGCCATTGTCGACCCAAGCAGATACCCTGTTGCGAGAACTACCATTTGTTCTTGTTCTAAGTGTGGAGAGGTCTTCCCAAAGATGGAAAGCTTGGAACTTCACCTAGCATTTCGCCATGCCGTATCGGAGCTGGGGCCGGAAGATTCGGGTCGTAATATAGTGGAGATCATTTTCAAATCAAGCTGGCTCAAAAAGGATAGTACAGTATTCCAAATCGAACGGATATTAAAGGTCCAGAACACCCAGCGAACAATCCAACGTTTCGAAGACTGCCGAGACGCAGTAAAGACACGTGCGCTCAACAGTAGCAGAAAAAACCCTAGGTGCGCTGCCGATGGAAACGAGCTACTGAGGTTCCATTGCACCAGTTTATCGTGCGCGCTAGGCGCACGTGGATCGTCCAGCTTGTGCGGCTCCGTTCCAGGCTGTGGAGTCTGCACTATCATACGCCACGGCTTTGAAGGAAAAACGGAAGAGGGGGTGCGAACCACAGCTTGCAGCGGTAGGGCGCACGACCTGTGGAGCTGTACAGAAGGAAGGACTCGGAGGGCGATGCTGGTGTGTCGTGTCATCGCCGGAAGGGTGAGGCGCGTCGACGGAGATGCGGTGGACCAGGAGGAGGCCGTGCCTCCTGGGTCGTATGATTCTGTATCTGGACAAGCTGGCGTGTACTCCAATCTCGAGGAGTTGATTGTCTTCAATCCCAAGGCTATCCTTCCTTGTTTTGTAGTTATTTACGCTGCGCTGGAGTCCTAG 1188 50.42 MAVAAFLPLPDQHLEPKNHLSKRKCKQQKPSSSSSSSWNQIKNLLTCKQIEGTKVHDPSKIPSATSKVGYTCSSICSFKDVIHGNTKVVHRADNSPVSSSVGQEASSLSRKGTNGQSTRSVSRSINGSTRGMQLRKLSGCYECHAIVDPSRYPVARTTICSCSKCGEVFPKMESLELHLAFRHAVSELGPEDSGRNIVEIIFKSSWLKKDSTVFQIERILKVQNTQRTIQRFEDCRDAVKTRALNSSRKNPRCAADGNELLRFHCTSLSCALGARGSSSLCGSVPGCGVCTIIRHGFEGKTEEGVRTTACSGRAHDLWSCTEGRTRRAMLVCRVIAGRVRRVDGDAVDQEEAVPPGSYDSVSGQAGVYSNLEELIVFNPKAILPCFVVIYAALES 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2522305 2523980 + Bda016247.1 Bda03g00290 3549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g00290 395 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 27 394 - -
Bda03g00290 395 MobiDBLite consensus disorder prediction 92 124 - -
Bda03g00290 395 ProSitePatterns Zinc finger C2H2 type domain signature. 160 183 IPR013087 -
Bda03g00290 395 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 27 394 - -
Bda03g00290 395 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Bda03g00290 395 MobiDBLite consensus disorder prediction 1 38 - -
Bda03g00290 395 Gene3D - 184 391 - -
Bda03g00290 395 SUPERFAMILY ADP-ribosylation 185 391 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00290 Bda08g01222 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01412 Bda-Chr1:50041254 Bda03g00290 Bda-Chr3:2522305 2.38E-79 dispersed
Bda03g00290 Bda-Chr3:2522305 Bda03g00523 Bda-Chr3:4373738 3.59E-103 dispersed
Bda07g00004 Bda-Chr7:48102 Bda03g00290 Bda-Chr3:2522305 8.91E-36 transposed
Bda03g00290 Bda-Chr3:2522305 Bda08g01222 Bda-Chr8:50076592 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15634 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g00290 - - zju:107435832 574.318